RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 SHROOM2Q13796 1616 aa20.36■□□□□ 0.85
CLN6-215ENST00000636674 DNMT1P26358 1616 aaKnown RBP20.34■□□□□ 0.85
CLN6-215ENST00000636674 ROCK1Q13464 1354 aa20.34■□□□□ 0.85
CLN6-215ENST00000636674 TRIM52Q96A61 297 aa20.34■□□□□ 0.85
CLN6-215ENST00000636674 AEBP2Q6ZN18 517 aaPredicted RBP20.32■□□□□ 0.84
CLN6-215ENST00000636674 RRP7BPQ9NSQ0 103 aa20.32■□□□□ 0.84
CLN6-215ENST00000636674 BCANQ96GW7 911 aa20.31■□□□□ 0.84
CLN6-215ENST00000636674 POLR1AO95602 1720 aaPredicted RBP20.31■□□□□ 0.84
CLN6-215ENST00000636674 KIAA0556O60303 1618 aa20.3■□□□□ 0.84
CLN6-215ENST00000636674 WASHC2AQ641Q2 1341 aa20.3■□□□□ 0.84
CLN6-215ENST00000636674 CNTLNQ9NXG0 1405 aa20.29■□□□□ 0.84
CLN6-215ENST00000636674 HSPA5P11021 654 aaKnown RBP20.29■□□□□ 0.84
CLN6-215ENST00000636674 DAPK1P53355 1430 aa20.29■□□□□ 0.84
CLN6-215ENST00000636674 RPRD2Q5VT52 1461 aaKnown RBP20.28■□□□□ 0.84
CLN6-215ENST00000636674 MPHOSPH9Q99550 1183 aa20.27■□□□□ 0.84
CLN6-215ENST00000636674 KIAA0586Q9BVV6 1533 aa20.27■□□□□ 0.83
CLN6-215ENST00000636674 NCOA1Q15788 1441 aa20.26■□□□□ 0.83
CLN6-215ENST00000636674 TEX14Q8IWB6 1497 aa20.26■□□□□ 0.83
CLN6-215ENST00000636674 ERCC6L2Q5T890 1561 aa20.26■□□□□ 0.83
CLN6-215ENST00000636674 EIF4G2P78344 907 aaKnown RBP eCLIP20.26■□□□□ 0.83
CLN6-215ENST00000636674 CHIC2Q9UKJ5 165 aa20.26■□□□□ 0.83
CLN6-215ENST00000636674 CYB5RLQ6IPT4 315 aa20.25■□□□□ 0.83
CLN6-215ENST00000636674 DISP1Q96F81 1524 aa20.25■□□□□ 0.83
CLN6-215ENST00000636674 RAPGEF6Q8TEU7 1601 aa20.24■□□□□ 0.83
CLN6-215ENST00000636674 ANKRD30BQ9BXX2 1392 aa20.24■□□□□ 0.83
CLN6-215ENST00000636674 ABCC5O15440 1437 aa20.23■□□□□ 0.83
CLN6-215ENST00000636674 NUP153P49790 1475 aaKnown RBP20.22■□□□□ 0.83
CLN6-215ENST00000636674 ANP32EQ9BTT0 268 aa20.22■□□□□ 0.83
CLN6-215ENST00000636674 JPH4Q96JJ6 628 aa20.21■□□□□ 0.83
CLN6-215ENST00000636674 ADGBQ8N7X0 1667 aa20.2■□□□□ 0.82
CLN6-215ENST00000636674 ITSN2Q9NZM3 1697 aa20.2■□□□□ 0.82
CLN6-215ENST00000636674 PRG4Q92954 1404 aaPredicted RBP20.2■□□□□ 0.82
CLN6-215ENST00000636674 CCDC7Q96M83 1385 aa20.2■□□□□ 0.82
CLN6-215ENST00000636674 L3MBTL2Q969R5 705 aa20.19■□□□□ 0.82
CLN6-215ENST00000636674 HNRNPUQ00839 825 aaKnown RBP eCLIP20.17■□□□□ 0.82
CLN6-215ENST00000636674 ADCY10Q96PN6 1610 aa20.17■□□□□ 0.82
CLN6-215ENST00000636674 SPATA31E1Q6ZUB1 1445 aa20.17■□□□□ 0.82
CLN6-215ENST00000636674 CROCC2H7BZ55 1655 aa20.15■□□□□ 0.82
CLN6-215ENST00000636674 ERICH6BQ5W0A0 696 aa20.14■□□□□ 0.81
CLN6-215ENST00000636674 RBM19Q9Y4C8 960 aaKnown RBP20.13■□□□□ 0.81
CLN6-215ENST00000636674 ADGRL2O95490 1459 aa20.13■□□□□ 0.81
CLN6-215ENST00000636674 PZPP20742 1482 aa20.12■□□□□ 0.81
CLN6-215ENST00000636674 MBD5Q9P267 1494 aa20.12■□□□□ 0.81
CLN6-215ENST00000636674 TROQ12816 1431 aaPredicted RBP20.11■□□□□ 0.81
CLN6-215ENST00000636674 CAMSAP2Q08AD1 1489 aa20.1■□□□□ 0.81
CLN6-215ENST00000636674 PRKRIP1Q9H875 184 aaPredicted RBP20.1■□□□□ 0.81
CLN6-215ENST00000636674 CDK11AQ9UQ88 783 aaPredicted RBP20.09■□□□□ 0.81
CLN6-215ENST00000636674 NBPF8Q3BBV2 869 aa20.09■□□□□ 0.81
CLN6-215ENST00000636674 C11orf95C9JLR9 678 aaPredicted RBP20.08■□□□□ 0.8
CLN6-215ENST00000636674 FOXD1Q16676 465 aa20.07■□□□□ 0.8
CLN6-215ENST00000636674 KIF14Q15058 1648 aa20.06■□□□□ 0.8
CLN6-215ENST00000636674 ZBED9Q6R2W3 1325 aa20.04■□□□□ 0.8
CLN6-215ENST00000636674 SLC4A1APQ9BWU0 796 aaKnown RBP20.04■□□□□ 0.8
CLN6-215ENST00000636674 GPATCH8Q9UKJ3 1502 aaKnown RBP20.04■□□□□ 0.8
CLN6-215ENST00000636674 CARMIL2Q6F5E8 1435 aa20.04■□□□□ 0.8
CLN6-215ENST00000636674 KIF7Q2M1P5 1343 aa20.04■□□□□ 0.8
CLN6-215ENST00000636674 ZNF644Q9H582 1327 aaPredicted RBP20.04■□□□□ 0.8
CLN6-215ENST00000636674 KIAA1107Q9UPP5 1409 aa20.03■□□□□ 0.8
CLN6-215ENST00000636674 ARID3CA6NKF2 412 aa20.02■□□□□ 0.8
CLN6-215ENST00000636674 CCDC184Q52MB2 194 aa20.02■□□□□ 0.8
CLN6-215ENST00000636674 SHANK2Q9UPX8 1470 aa19.99■□□□□ 0.79
CLN6-215ENST00000636674 KDM5CP41229 1560 aa19.99■□□□□ 0.79
CLN6-215ENST00000636674 MRS2Q9HD23 443 aa19.98■□□□□ 0.79
CLN6-215ENST00000636674 BCORL1Q5H9F3 1711 aa19.97■□□□□ 0.79
CLN6-215ENST00000636674 KDM5DQ9BY66 1539 aa19.97■□□□□ 0.79
CLN6-215ENST00000636674 CDC42BPAQ5VT25 1732 aa19.96■□□□□ 0.79
CLN6-215ENST00000636674 PLB1Q6P1J6 1458 aa19.96■□□□□ 0.79
CLN6-215ENST00000636674 PPP4R2Q9NY27 417 aa19.96■□□□□ 0.79
CLN6-215ENST00000636674 ARID4BQ4LE39 1312 aaPredicted RBP19.96■□□□□ 0.79
CLN6-215ENST00000636674 FANCIQ9NVI1 1328 aa19.96■□□□□ 0.79
CLN6-215ENST00000636674 DHX29Q7Z478 1369 aaKnown RBP19.96■□□□□ 0.79
CLN6-215ENST00000636674 UHRF1BP1Q6BDS2 1440 aa19.95■□□□□ 0.78
CLN6-215ENST00000636674 CFDP1Q9UEE9 299 aaPredicted RBP19.95■□□□□ 0.78
CLN6-215ENST00000636674 ARHGEF12Q9NZN5 1544 aa19.95■□□□□ 0.78
CLN6-215ENST00000636674 ANKRD30AQ9BXX3 1397 aa19.94■□□□□ 0.78
CLN6-215ENST00000636674 PTPRGP23470 1445 aa19.94■□□□□ 0.78
CLN6-215ENST00000636674 RALGAPBQ86X10 1494 aa19.93■□□□□ 0.78
CLN6-215ENST00000636674 USP47Q96K76 1375 aa19.92■□□□□ 0.78
CLN6-215ENST00000636674 ABCA8O94911 1581 aa19.91■□□□□ 0.78
CLN6-215ENST00000636674 ABCC10Q5T3U5 1492 aa19.91■□□□□ 0.78
CLN6-215ENST00000636674 ANKRD50Q9ULJ7 1429 aa19.91■□□□□ 0.78
CLN6-215ENST00000636674 FAM9BQ8IZU0 186 aa19.9■□□□□ 0.78
CLN6-215ENST00000636674 IRX6P78412 446 aaPredicted RBP19.9■□□□□ 0.78
CLN6-215ENST00000636674 SMG6Q86US8 1419 aaKnown RBP19.88■□□□□ 0.77
CLN6-215ENST00000636674 ROCK2O75116 1388 aaKnown RBP19.88■□□□□ 0.77
CLN6-215ENST00000636674 ARHGEF5Q12774 1597 aa19.86■□□□□ 0.77
CLN6-215ENST00000636674 UHRF1BP1LA0JNW5 1464 aa19.85■□□□□ 0.77
CLN6-215ENST00000636674 C9orf84Q5VXU9 1444 aa19.85■□□□□ 0.77
CLN6-215ENST00000636674 PKD2Q13563 968 aa19.85■□□□□ 0.77
CLN6-215ENST00000636674 MSH5O43196 834 aa19.83■□□□□ 0.77
CLN6-215ENST00000636674 E9PCH4 1651 aa19.83■□□□□ 0.77
CLN6-215ENST00000636674 ABCC2Q92887 1545 aa19.83■□□□□ 0.76
CLN6-215ENST00000636674 TRHP20396 242 aaPredicted RBP19.83■□□□□ 0.76
CLN6-215ENST00000636674 NPM1P06748 294 aaKnown RBP eCLIP19.8■□□□□ 0.76
CLN6-215ENST00000636674 RNF123Q5XPI4 1314 aa19.8■□□□□ 0.76
CLN6-215ENST00000636674 ATP10BO94823 1461 aa19.79■□□□□ 0.76
CLN6-215ENST00000636674 KTN1Q86UP2 1357 aaKnown RBP19.78■□□□□ 0.76
CLN6-215ENST00000636674 KIF13AQ9H1H9 1805 aa19.78■□□□□ 0.76
CLN6-215ENST00000636674 ZNF777Q9ULD5 760 aaPredicted RBP19.77■□□□□ 0.76
CLN6-215ENST00000636674 NUP155O75694 1391 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms