RNA–Protein interactions for RNA: ENST00000636666.1

EPB41-213, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 5

Gene EPB41, Length 3,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-213ENST00000636666 FGD5Q6ZNL6 1462 aa8.84□□□□□ -0.99
EPB41-213ENST00000636666 PRKCSHP14314 528 aaPredicted RBP8.83□□□□□ -1
EPB41-213ENST00000636666 RRP1P56182 461 aaKnown RBP8.82□□□□□ -1
EPB41-213ENST00000636666 WDR43Q15061 677 aaKnown RBP eCLIP8.82□□□□□ -1
EPB41-213ENST00000636666 SENP3Q9H4L4 574 aaPredicted RBP8.82□□□□□ -1
EPB41-213ENST00000636666 BRPF3Q9ULD4 1205 aa8.82□□□□□ -1
EPB41-213ENST00000636666 PTPRKQ15262 1439 aa8.82□□□□□ -1
EPB41-213ENST00000636666 UNC13AQ9UPW8 1703 aa8.82□□□□□ -1
EPB41-213ENST00000636666 NEUROD2Q15784 382 aa8.82□□□□□ -1
EPB41-213ENST00000636666 AQRO60306 1485 aaKnown RBP eCLIP8.82□□□□□ -13e-7■■■■■ 28
EPB41-213ENST00000636666 TCERG1O14776 1098 aaKnown RBP8.81□□□□□ -1
EPB41-213ENST00000636666 TSPY4P0CV99 314 aa8.81□□□□□ -1
EPB41-213ENST00000636666 TSPY10P0CW01 314 aa8.81□□□□□ -1
EPB41-213ENST00000636666 SPRYD3Q8NCJ5 442 aa8.81□□□□□ -1
EPB41-213ENST00000636666 CFTRP13569 1480 aa8.81□□□□□ -1
EPB41-213ENST00000636666 NAIPQ13075 1403 aa8.81□□□□□ -1
EPB41-213ENST00000636666 CADPSQ9ULU8 1353 aa8.81□□□□□ -1
EPB41-213ENST00000636666 CRBNQ96SW2 442 aa8.8□□□□□ -1
EPB41-213ENST00000636666 USP47Q96K76 1375 aa8.8□□□□□ -1
EPB41-213ENST00000636666 DDRGK1Q96HY6 314 aa8.8□□□□□ -1
EPB41-213ENST00000636666 SLKQ9H2G2 1235 aaPredicted RBP8.8□□□□□ -1
EPB41-213ENST00000636666 BICRAQ9NZM4 1560 aa8.8□□□□□ -1
EPB41-213ENST00000636666 HFM1A2PYH4 1435 aa8.79□□□□□ -1
EPB41-213ENST00000636666 NCOA2Q15596 1464 aa8.79□□□□□ -1
EPB41-213ENST00000636666 MYOM3Q5VTT5 1437 aa8.79□□□□□ -1
EPB41-213ENST00000636666 PCF11O94913 1555 aaKnown RBP8.78□□□□□ -1
EPB41-213ENST00000636666 PNISRQ8TF01 805 aaKnown RBP8.78□□□□□ -1
EPB41-213ENST00000636666 FRAT1Q92837 279 aaPredicted RBP8.78□□□□□ -1
EPB41-213ENST00000636666 TNNT2P45379 298 aaPredicted RBP8.77□□□□□ -1.01
EPB41-213ENST00000636666 CASKIN1Q8WXD9 1431 aa8.77□□□□□ -1.01
EPB41-213ENST00000636666 CCDC146Q8IYE0 955 aa8.76□□□□□ -1.01
EPB41-213ENST00000636666 NUP155O75694 1391 aa8.76□□□□□ -1.01
EPB41-213ENST00000636666 GSE1Q14687 1217 aa8.76□□□□□ -1.01
EPB41-213ENST00000636666 NFKBIBQ15653 356 aa8.75□□□□□ -1.01
EPB41-213ENST00000636666 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.75□□□□□ -1.01
EPB41-213ENST00000636666 GZF1Q9H116 711 aaPredicted RBP8.75□□□□□ -1.01
EPB41-213ENST00000636666 NLRP13Q86W25 1043 aa8.75□□□□□ -1.01
EPB41-213ENST00000636666 ARID4BQ4LE39 1312 aaPredicted RBP8.75□□□□□ -1.01
EPB41-213ENST00000636666 KNSTRNQ9Y448 316 aa8.74□□□□□ -1.01
EPB41-213ENST00000636666 MYBBP1AQ9BQG0 1328 aaKnown RBP8.74□□□□□ -1.01
EPB41-213ENST00000636666 BACH2Q9BYV9 841 aa8.74□□□□□ -1.01
EPB41-213ENST00000636666 ROCK2O75116 1388 aaKnown RBP8.74□□□□□ -1.01
EPB41-213ENST00000636666 KTN1Q86UP2 1357 aaKnown RBP8.73□□□□□ -1.01
EPB41-213ENST00000636666 RALBP1Q15311 655 aa8.73□□□□□ -1.01
EPB41-213ENST00000636666 C20orf194Q5TEA3 1177 aa8.73□□□□□ -1.01
EPB41-213ENST00000636666 PANK3Q9H999 370 aa8.73□□□□□ -1.01
EPB41-213ENST00000636666 SMG6Q86US8 1419 aaKnown RBP8.73□□□□□ -1.01
EPB41-213ENST00000636666 FRAT2O75474 233 aaPredicted RBP8.73□□□□□ -1.01
EPB41-213ENST00000636666 FYCO1Q9BQS8 1478 aa8.73□□□□□ -1.01
EPB41-213ENST00000636666 FANCD2Q9BXW9 1451 aa8.73□□□□□ -1.01
EPB41-213ENST00000636666 UPF2Q9HAU5 1272 aaKnown RBP8.72□□□□□ -1.01
EPB41-213ENST00000636666 PLEKHD1A6NEE1 506 aa8.72□□□□□ -1.01
EPB41-213ENST00000636666 CHGAP10645 457 aaKnown RBP8.72□□□□□ -1.01
EPB41-213ENST00000636666 HNRNPMP52272 730 aaKnown RBP eCLIP8.72□□□□□ -1.01
EPB41-213ENST00000636666 CHMP7Q8WUX9 453 aaPredicted RBP8.72□□□□□ -1.01
EPB41-213ENST00000636666 KIF15Q9NS87 1388 aa8.71□□□□□ -1.01
EPB41-213ENST00000636666 NCAPD3P42695 1498 aa8.71□□□□□ -1.01
EPB41-213ENST00000636666 NCOA1Q15788 1441 aa8.71□□□□□ -1.02
EPB41-213ENST00000636666 NBPF1Q3BBV0 1214 aa8.71□□□□□ -1.02
EPB41-213ENST00000636666 USP35Q9P2H5 1018 aa8.71□□□□□ -1.02
EPB41-213ENST00000636666 BIVM-ERCC5R4GMW8 1640 aa8.7□□□□□ -1.02
EPB41-213ENST00000636666 CLUAP1Q96AJ1 413 aa8.7□□□□□ -1.02
EPB41-213ENST00000636666 NAP1L5Q96NT1 182 aaPredicted RBP8.69□□□□□ -1.02
EPB41-213ENST00000636666 PEG3Q9GZU2 1588 aa8.69□□□□□ -1.02
EPB41-213ENST00000636666 BCL2L13Q9BXK5 485 aa8.69□□□□□ -1.02
EPB41-213ENST00000636666 ADAMTS8Q9UP79 889 aa8.69□□□□□ -1.02
EPB41-213ENST00000636666 HSP90AA1P07900 732 aaKnown RBP8.69□□□□□ -1.02
EPB41-213ENST00000636666 PTPN23Q9H3S7 1636 aa8.69□□□□□ -1.02
EPB41-213ENST00000636666 NESP48681 1621 aa8.68□□□□□ -1.02
EPB41-213ENST00000636666 TMF1P82094 1093 aa8.68□□□□□ -1.02
EPB41-213ENST00000636666 MS4A1P11836 297 aa8.67□□□□□ -1.02
EPB41-213ENST00000636666 BECN1Q14457 450 aa8.67□□□□□ -1.02
EPB41-213ENST00000636666 ANKRD30BQ9BXX2 1392 aa8.67□□□□□ -1.02
EPB41-213ENST00000636666 PDE3BQ13370 1112 aa8.67□□□□□ -1.02
EPB41-213ENST00000636666 FAM161AQ3B820 660 aa8.67□□□□□ -1.02
EPB41-213ENST00000636666 RRP7AQ9Y3A4 280 aaKnown RBP8.67□□□□□ -1.02
EPB41-213ENST00000636666 MAP3K1Q13233 1512 aa8.67□□□□□ -1.02
EPB41-213ENST00000636666 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.67□□□□□ -1.025e-11■□□□□ 10.7
EPB41-213ENST00000636666 PDS5BQ9NTI5 1447 aa8.67□□□□□ -1.02
EPB41-213ENST00000636666 GOLGA2Q08379 1002 aa8.67□□□□□ -1.02
EPB41-213ENST00000636666 COG6Q9Y2V7 657 aa8.66□□□□□ -1.02
EPB41-213ENST00000636666 APAF1O14727 1248 aa8.66□□□□□ -1.02
EPB41-213ENST00000636666 CDK13Q14004 1512 aaKnown RBP8.65□□□□□ -1.02
EPB41-213ENST00000636666 POLA1P09884 1462 aaPredicted RBP8.64□□□□□ -1.03
EPB41-213ENST00000636666 ANKRD30AQ9BXX3 1397 aa8.64□□□□□ -1.03
EPB41-213ENST00000636666 CENPQQ7L2Z9 268 aaPredicted RBP8.64□□□□□ -1.03
EPB41-213ENST00000636666 BCAR3O75815 825 aa8.64□□□□□ -1.03
EPB41-213ENST00000636666 DNAJC5BQ9UF47 199 aa8.64□□□□□ -1.03
EPB41-213ENST00000636666 GAPVD1Q14C86 1478 aa8.63□□□□□ -1.03
EPB41-213ENST00000636666 BRD4O60885 1362 aaPredicted RBP8.63□□□□□ -1.03
EPB41-213ENST00000636666 PANK1Q8TE04 598 aa8.63□□□□□ -1.03
EPB41-213ENST00000636666 POGKQ9P215 609 aa8.62□□□□□ -1.03
EPB41-213ENST00000636666 MFAP1P55081 439 aaKnown RBP8.61□□□□□ -1.03
EPB41-213ENST00000636666 FOXD4L1Q9NU39 408 aa8.61□□□□□ -1.03
EPB41-213ENST00000636666 DHX29Q7Z478 1369 aaKnown RBP8.61□□□□□ -1.03
EPB41-213ENST00000636666 RPRD2Q5VT52 1461 aaKnown RBP8.61□□□□□ -1.03
EPB41-213ENST00000636666 FTSJ3Q8IY81 847 aaKnown RBP8.61□□□□□ -1.03
EPB41-213ENST00000636666 AEBP2Q6ZN18 517 aaPredicted RBP8.6□□□□□ -1.03
EPB41-213ENST00000636666 DAPK1P53355 1430 aa8.6□□□□□ -1.03
EPB41-213ENST00000636666 EFCAB5A4FU69 1503 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms