RNA–Protein interactions for RNA: ENST00000636603.1

CHRNA7-217, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5 BASIC

Gene CHRNA7, Length 2,012 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-217ENST00000636603 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.01■■□□□ 1.27
CHRNA7-217ENST00000636603 PTPRKQ15262 1439 aa22.98■■□□□ 1.27
CHRNA7-217ENST00000636603 CDC42BPBQ9Y5S2 1711 aa22.98■■□□□ 1.27
CHRNA7-217ENST00000636603 MAPKBP1O60336 1514 aa22.96■■□□□ 1.27
CHRNA7-217ENST00000636603 CAMSAP2Q08AD1 1489 aa22.96■■□□□ 1.27
CHRNA7-217ENST00000636603 PREX2Q70Z35 1606 aa22.95■■□□□ 1.26
CHRNA7-217ENST00000636603 CHIC2Q9UKJ5 165 aa22.94■■□□□ 1.26
CHRNA7-217ENST00000636603 MYO5CQ9NQX4 1742 aa22.93■■□□□ 1.26
CHRNA7-217ENST00000636603 ARHGAP5Q13017 1502 aa22.92■■□□□ 1.26
CHRNA7-217ENST00000636603 PLCH2O75038 1416 aa22.9■■□□□ 1.26
CHRNA7-217ENST00000636603 HNRNPMP52272 730 aaKnown RBP eCLIP22.89■■□□□ 1.26
CHRNA7-217ENST00000636603 ABCA9Q8IUA7 1624 aa22.88■■□□□ 1.25
CHRNA7-217ENST00000636603 SAMD9LQ8IVG5 1584 aa22.88■■□□□ 1.25
CHRNA7-217ENST00000636603 ABCC5O15440 1437 aa22.87■■□□□ 1.25
CHRNA7-217ENST00000636603 DAPK1P53355 1430 aa22.87■■□□□ 1.25
CHRNA7-217ENST00000636603 DNMT1P26358 1616 aaKnown RBP22.85■■□□□ 1.25
CHRNA7-217ENST00000636603 RRP7BPQ9NSQ0 103 aa22.84■■□□□ 1.25
CHRNA7-217ENST00000636603 EFCAB2Q5VUJ9 269 aa22.83■■□□□ 1.25
CHRNA7-217ENST00000636603 KIF13AQ9H1H9 1805 aa22.81■■□□□ 1.24
CHRNA7-217ENST00000636603 DIP2BQ9P265 1576 aa22.8■■□□□ 1.24
CHRNA7-217ENST00000636603 CD109Q6YHK3 1445 aa22.8■■□□□ 1.24
CHRNA7-217ENST00000636603 SYCP2Q9BX26 1530 aa22.8■■□□□ 1.24
CHRNA7-217ENST00000636603 SETD5Q9C0A6 1442 aa22.8■■□□□ 1.24
CHRNA7-217ENST00000636603 RAB3GAP2Q9H2M9 1393 aa22.8■■□□□ 1.24
CHRNA7-217ENST00000636603 MBD5Q9P267 1494 aa22.79■■□□□ 1.24
CHRNA7-217ENST00000636603 ARHGEF12Q9NZN5 1544 aa22.78■■□□□ 1.24
CHRNA7-217ENST00000636603 FAM69CQ0P6D2 419 aa22.78■■□□□ 1.24
CHRNA7-217ENST00000636603 FANCAO15360 1455 aa22.77■■□□□ 1.24
CHRNA7-217ENST00000636603 NAIPQ13075 1403 aa22.75■■□□□ 1.23
CHRNA7-217ENST00000636603 HFM1A2PYH4 1435 aa22.74■■□□□ 1.23
CHRNA7-217ENST00000636603 AKNAQ7Z591 1439 aa22.74■■□□□ 1.23
CHRNA7-217ENST00000636603 CROCC2H7BZ55 1655 aa22.74■■□□□ 1.23
CHRNA7-217ENST00000636603 ARAP3Q8WWN8 1544 aa22.74■■□□□ 1.23
CHRNA7-217ENST00000636603 TRHP20396 242 aaPredicted RBP22.74■■□□□ 1.23
CHRNA7-217ENST00000636603 GLI2P10070 1586 aa22.72■■□□□ 1.23
CHRNA7-217ENST00000636603 ABCC1P33527 1531 aa22.72■■□□□ 1.23
CHRNA7-217ENST00000636603 ARHGEF5Q12774 1597 aa22.72■■□□□ 1.23
CHRNA7-217ENST00000636603 TSPY4P0CV99 314 aa22.72■■□□□ 1.23
CHRNA7-217ENST00000636603 TSPY10P0CW01 314 aa22.72■■□□□ 1.23
CHRNA7-217ENST00000636603 KIAA1107Q9UPP5 1409 aa22.71■■□□□ 1.23
CHRNA7-217ENST00000636603 CCDC141Q6ZP82 1450 aa22.71■■□□□ 1.23
CHRNA7-217ENST00000636603 TRAPPC8Q9Y2L5 1435 aa22.71■■□□□ 1.23
CHRNA7-217ENST00000636603 C9orf84Q5VXU9 1444 aa22.7■■□□□ 1.22
CHRNA7-217ENST00000636603 PLEKHH2Q8IVE3 1493 aa22.7■■□□□ 1.22
CHRNA7-217ENST00000636603 AFAP1Q8N556 730 aa22.69■■□□□ 1.22
CHRNA7-217ENST00000636603 MAP3K4Q9Y6R4 1608 aa22.69■■□□□ 1.22
CHRNA7-217ENST00000636603 ROCK1Q13464 1354 aa22.68■■□□□ 1.22
CHRNA7-217ENST00000636603 NCOA1Q15788 1441 aa22.68■■□□□ 1.22
CHRNA7-217ENST00000636603 KDM6BO15054 1643 aa22.68■■□□□ 1.22
CHRNA7-217ENST00000636603 ADGRL1O94910 1474 aa22.67■■□□□ 1.22
CHRNA7-217ENST00000636603 TSPOAP1O95153 1857 aa22.67■■□□□ 1.22
CHRNA7-217ENST00000636603 SCAPERQ9BY12 1400 aa22.66■■□□□ 1.22
CHRNA7-217ENST00000636603 RSPH4AQ5TD94 716 aa22.66■■□□□ 1.22
CHRNA7-217ENST00000636603 ADGBQ8N7X0 1667 aa22.65■■□□□ 1.22
CHRNA7-217ENST00000636603 SHANK2Q9UPX8 1470 aa22.65■■□□□ 1.22
CHRNA7-217ENST00000636603 GCC2Q8IWJ2 1684 aa22.65■■□□□ 1.22
CHRNA7-217ENST00000636603 ANKRD30AQ9BXX3 1397 aa22.64■■□□□ 1.22
CHRNA7-217ENST00000636603 ADGRL2O95490 1459 aa22.64■■□□□ 1.21
CHRNA7-217ENST00000636603 DHX57Q6P158 1386 aaKnown RBP22.63■■□□□ 1.21
CHRNA7-217ENST00000636603 DIEXFQ68CQ4 756 aaKnown RBP22.6■■□□□ 1.21
CHRNA7-217ENST00000636603 SCAF1Q9H7N4 1312 aaKnown RBP22.59■■□□□ 1.21
CHRNA7-217ENST00000636603 PPRC1Q5VV67 1664 aaKnown RBP22.59■■□□□ 1.21
CHRNA7-217ENST00000636603 KIF15Q9NS87 1388 aa22.58■■□□□ 1.2
CHRNA7-217ENST00000636603 SPAG9O60271 1321 aaKnown RBP22.57■■□□□ 1.2
CHRNA7-217ENST00000636603 CFAP74Q9C0B2 1584 aa22.57■■□□□ 1.2
CHRNA7-217ENST00000636603 RAPGEF3O95398 923 aa22.56■■□□□ 1.2
CHRNA7-217ENST00000636603 TRIM52Q96A61 297 aa22.56■■□□□ 1.2
CHRNA7-217ENST00000636603 MAST1Q9Y2H9 1570 aa22.56■■□□□ 1.2
CHRNA7-217ENST00000636603 NEO1Q92859 1461 aa22.55■■□□□ 1.2
CHRNA7-217ENST00000636603 MYT1LQ9UL68 1186 aa22.55■■□□□ 1.2
CHRNA7-217ENST00000636603 ANKRD50Q9ULJ7 1429 aa22.53■■□□□ 1.2
CHRNA7-217ENST00000636603 POGZQ7Z3K3 1410 aa22.51■■□□□ 1.19
CHRNA7-217ENST00000636603 ZFYVE16Q7Z3T8 1539 aa22.5■■□□□ 1.19
CHRNA7-217ENST00000636603 ZNF316A6NFI3 1004 aaPredicted RBP22.5■■□□□ 1.19
CHRNA7-217ENST00000636603 ZNF518AQ6AHZ1 1483 aa22.49■■□□□ 1.19
CHRNA7-217ENST00000636603 TEX14Q8IWB6 1497 aa22.49■■□□□ 1.19
CHRNA7-217ENST00000636603 DENND4BO75064 1496 aaPredicted RBP22.48■■□□□ 1.19
CHRNA7-217ENST00000636603 PLXNC1O60486 1568 aa22.48■■□□□ 1.19
CHRNA7-217ENST00000636603 ATP7AQ04656 1500 aa22.47■■□□□ 1.19
CHRNA7-217ENST00000636603 RTEL1-TNFRSF6BF6WH68 1400 aa22.47■■□□□ 1.19
CHRNA7-217ENST00000636603 INO80Q9ULG1 1556 aaPredicted RBP22.46■■□□□ 1.19
CHRNA7-217ENST00000636603 KIDINS220Q9ULH0 1771 aa22.45■■□□□ 1.18
CHRNA7-217ENST00000636603 KDM5CP41229 1560 aa22.43■■□□□ 1.18
CHRNA7-217ENST00000636603 RICTORQ6R327 1708 aa22.43■■□□□ 1.18
CHRNA7-217ENST00000636603 DUOX2Q9NRD8 1548 aa22.42■■□□□ 1.18
CHRNA7-217ENST00000636603 MPHOSPH9Q99550 1183 aa22.41■■□□□ 1.18
CHRNA7-217ENST00000636603 FOXD1Q16676 465 aa22.41■■□□□ 1.18
CHRNA7-217ENST00000636603 FRMPD1Q5SYB0 1578 aa22.4■■□□□ 1.18
CHRNA7-217ENST00000636603 COL17A1Q9UMD9 1497 aaPredicted RBP22.4■■□□□ 1.18
CHRNA7-217ENST00000636603 ACIN1Q9UKV3 1341 aaKnown RBP22.39■■□□□ 1.18
CHRNA7-217ENST00000636603 NEUROD1Q13562 356 aa22.39■■□□□ 1.17
CHRNA7-217ENST00000636603 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.39■■□□□ 1.17
CHRNA7-217ENST00000636603 HECW2Q9P2P5 1572 aa22.38■■□□□ 1.17
CHRNA7-217ENST00000636603 MLH3Q9UHC1 1453 aa22.38■■□□□ 1.17
CHRNA7-217ENST00000636603 NUP155O75694 1391 aa22.38■■□□□ 1.17
CHRNA7-217ENST00000636603 SLC4A1APQ9BWU0 796 aaKnown RBP22.38■■□□□ 1.17
CHRNA7-217ENST00000636603 SIN3AQ96ST3 1273 aa22.37■■□□□ 1.17
CHRNA7-217ENST00000636603 PZPP20742 1482 aa22.36■■□□□ 1.17
CHRNA7-217ENST00000636603 ERBINQ96RT1 1412 aa22.35■■□□□ 1.17
CHRNA7-217ENST00000636603 CLSPNQ9HAW4 1339 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms