RNA–Protein interactions for RNA: ENST00000636466.1

GABRB3-219, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-219ENST00000636466 NUDCQ9Y266 331 aa18.5■□□□□ 0.55
GABRB3-219ENST00000636466 RAD54L2Q9Y4B4 1467 aa18.49■□□□□ 0.55
GABRB3-219ENST00000636466 TPRNQ4KMQ1 711 aa18.49■□□□□ 0.55
GABRB3-219ENST00000636466 TRHP20396 242 aaPredicted RBP18.48■□□□□ 0.55
GABRB3-219ENST00000636466 MORC1Q86VD1 984 aa18.46■□□□□ 0.55
GABRB3-219ENST00000636466 ANP32EQ9BTT0 268 aa18.46■□□□□ 0.55
GABRB3-219ENST00000636466 ZNF644Q9H582 1327 aaPredicted RBP18.45■□□□□ 0.54
GABRB3-219ENST00000636466 HAP1P54257 671 aaPredicted RBP18.44■□□□□ 0.54
GABRB3-219ENST00000636466 ANKRD30AQ9BXX3 1397 aa18.44■□□□□ 0.54
GABRB3-219ENST00000636466 BECN1Q14457 450 aa18.42■□□□□ 0.54
GABRB3-219ENST00000636466 ROCK2O75116 1388 aaKnown RBP18.42■□□□□ 0.54
GABRB3-219ENST00000636466 KANK1Q14678 1352 aa18.41■□□□□ 0.54
GABRB3-219ENST00000636466 RBM19Q9Y4C8 960 aaKnown RBP18.41■□□□□ 0.54
GABRB3-219ENST00000636466 FGD5Q6ZNL6 1462 aa18.41■□□□□ 0.54
GABRB3-219ENST00000636466 DDRGK1Q96HY6 314 aa18.4■□□□□ 0.54
GABRB3-219ENST00000636466 ST20-MTHFSA0A0A6YYL1 179 aa18.39■□□□□ 0.53
GABRB3-219ENST00000636466 NCLP19338 710 aaKnown RBP18.38■□□□□ 0.53
GABRB3-219ENST00000636466 U2AF1L5P0DN76 240 aaPredicted RBP18.36■□□□□ 0.53
GABRB3-219ENST00000636466 U2AF1Q01081 240 aaKnown RBP eCLIP18.36■□□□□ 0.53
GABRB3-219ENST00000636466 SPAG9O60271 1321 aaKnown RBP18.36■□□□□ 0.53
GABRB3-219ENST00000636466 KTN1Q86UP2 1357 aaKnown RBP18.35■□□□□ 0.53
GABRB3-219ENST00000636466 NOP58Q9Y2X3 529 aaKnown RBP18.34■□□□□ 0.53
GABRB3-219ENST00000636466 RTN4Q9NQC3 1192 aaKnown RBP18.33■□□□□ 0.53
GABRB3-219ENST00000636466 RCAN3Q9UKA8 241 aa18.33■□□□□ 0.53
GABRB3-219ENST00000636466 TAOK2Q9UL54 1235 aa18.33■□□□□ 0.52
GABRB3-219ENST00000636466 CCDC146Q8IYE0 955 aa18.33■□□□□ 0.52
GABRB3-219ENST00000636466 PHLDB1Q86UU1 1377 aa18.32■□□□□ 0.52
GABRB3-219ENST00000636466 AQRO60306 1485 aaKnown RBP eCLIP18.32■□□□□ 0.52
GABRB3-219ENST00000636466 APBB1O00213 710 aa18.32■□□□□ 0.52
GABRB3-219ENST00000636466 SPRYD3Q8NCJ5 442 aa18.32■□□□□ 0.52
GABRB3-219ENST00000636466 NUTM2FA1L443 756 aa18.31■□□□□ 0.52
GABRB3-219ENST00000636466 TRAK1Q9UPV9 953 aa18.31■□□□□ 0.52
GABRB3-219ENST00000636466 CCDC18Q5T9S5 1454 aa18.31■□□□□ 0.52
GABRB3-219ENST00000636466 GAPVD1Q14C86 1478 aa18.29■□□□□ 0.52
GABRB3-219ENST00000636466 CLUAP1Q96AJ1 413 aa18.28■□□□□ 0.52
GABRB3-219ENST00000636466 WASHC2CQ9Y4E1 1318 aa18.28■□□□□ 0.52
GABRB3-219ENST00000636466 PTPRGP23470 1445 aa18.28■□□□□ 0.52
GABRB3-219ENST00000636466 DNAJC5BQ9UF47 199 aa18.27■□□□□ 0.52
GABRB3-219ENST00000636466 CYB5RLQ6IPT4 315 aa18.27■□□□□ 0.51
GABRB3-219ENST00000636466 TSHZ2Q9NRE2 1034 aa18.26■□□□□ 0.51
GABRB3-219ENST00000636466 NCAPD3P42695 1498 aa18.26■□□□□ 0.51
GABRB3-219ENST00000636466 RALBP1Q15311 655 aa18.24■□□□□ 0.51
GABRB3-219ENST00000636466 NESP48681 1621 aa18.24■□□□□ 0.51
GABRB3-219ENST00000636466 KIF21BO75037 1637 aa18.24■□□□□ 0.51
GABRB3-219ENST00000636466 PAK3O75914 559 aaPredicted RBP18.23■□□□□ 0.51
GABRB3-219ENST00000636466 ARAP1Q96P48 1450 aa18.23■□□□□ 0.51
GABRB3-219ENST00000636466 OS9Q13438 667 aaPredicted RBP18.22■□□□□ 0.51
GABRB3-219ENST00000636466 GOLGA6L22H0YM25 854 aa18.22■□□□□ 0.51
GABRB3-219ENST00000636466 RRP7AQ9Y3A4 280 aaKnown RBP18.22■□□□□ 0.51
GABRB3-219ENST00000636466 NLRP13Q86W25 1043 aa18.22■□□□□ 0.51
GABRB3-219ENST00000636466 PANK3Q9H999 370 aa18.22■□□□□ 0.51
GABRB3-219ENST00000636466 PRKRIP1Q9H875 184 aaPredicted RBP18.22■□□□□ 0.51
GABRB3-219ENST00000636466 HDGFL2Q7Z4V5 671 aaPredicted RBP18.21■□□□□ 0.51
GABRB3-219ENST00000636466 RSPH4AQ5TD94 716 aa18.2■□□□□ 0.5
GABRB3-219ENST00000636466 TRIM44Q96DX7 344 aaPredicted RBP18.2■□□□□ 0.5
GABRB3-219ENST00000636466 SYNJ1O43426 1573 aa18.19■□□□□ 0.5
GABRB3-219ENST00000636466 PLIN1O60240 522 aa18.19■□□□□ 0.5
GABRB3-219ENST00000636466 CASC1Q6TDU7 716 aa18.19■□□□□ 0.5
GABRB3-219ENST00000636466 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.17■□□□□ 0.5
GABRB3-219ENST00000636466 HSP90AB1P08238 724 aaKnown RBP18.17■□□□□ 0.5
GABRB3-219ENST00000636466 MS4A1P11836 297 aa18.16■□□□□ 0.5
GABRB3-219ENST00000636466 BCL2L13Q9BXK5 485 aa18.16■□□□□ 0.5
GABRB3-219ENST00000636466 ITPRIPQ8IWB1 547 aa18.16■□□□□ 0.5
GABRB3-219ENST00000636466 FGD6Q6ZV73 1430 aa18.16■□□□□ 0.5
GABRB3-219ENST00000636466 PNNQ9H307 717 aaKnown RBP18.16■□□□□ 0.5
GABRB3-219ENST00000636466 HDGFP51858 240 aaKnown RBP18.15■□□□□ 0.5
GABRB3-219ENST00000636466 CCDC144AA2RUR9 1427 aa18.15■□□□□ 0.5
GABRB3-219ENST00000636466 GOLGA2Q08379 1002 aa18.15■□□□□ 0.5
GABRB3-219ENST00000636466 SLKQ9H2G2 1235 aaPredicted RBP18.14■□□□□ 0.49
GABRB3-219ENST00000636466 PLCB2Q00722 1185 aa18.14■□□□□ 0.49
GABRB3-219ENST00000636466 RTF1Q92541 710 aaKnown RBP18.14■□□□□ 0.49
GABRB3-219ENST00000636466 KCNJ4P48050 445 aa18.13■□□□□ 0.49
GABRB3-219ENST00000636466 USP47Q96K76 1375 aa18.13■□□□□ 0.49
GABRB3-219ENST00000636466 ELL2O00472 640 aaPredicted RBP18.12■□□□□ 0.49
GABRB3-219ENST00000636466 AFAP1Q8N556 730 aa18.11■□□□□ 0.49
GABRB3-219ENST00000636466 LRRC9Q6ZRR7 1453 aa18.11■□□□□ 0.49
GABRB3-219ENST00000636466 SMC4Q9NTJ3 1288 aa18.11■□□□□ 0.49
GABRB3-219ENST00000636466 NAP1L2Q9ULW6 460 aaPredicted RBP18.1■□□□□ 0.49
GABRB3-219ENST00000636466 PTMAP06454 111 aaKnown RBP18.09■□□□□ 0.49
GABRB3-219ENST00000636466 FGD1P98174 961 aa18.09■□□□□ 0.49
GABRB3-219ENST00000636466 CFTRP13569 1480 aa18.09■□□□□ 0.49
GABRB3-219ENST00000636466 LTV1Q96GA3 475 aaPredicted RBP18.09■□□□□ 0.49
GABRB3-219ENST00000636466 MYOM3Q5VTT5 1437 aa18.09■□□□□ 0.49
GABRB3-219ENST00000636466 CHMP4BQ9H444 224 aaKnown RBP18.08■□□□□ 0.48
GABRB3-219ENST00000636466 ZNF330Q9Y3S2 320 aaPredicted RBP18.07■□□□□ 0.48
GABRB3-219ENST00000636466 DEKP35659 375 aaKnown RBP18.07■□□□□ 0.48
GABRB3-219ENST00000636466 IPO8O15397 1037 aaKnown RBP18.06■□□□□ 0.48
GABRB3-219ENST00000636466 HSCBQ8IWL3 235 aa18.06■□□□□ 0.48
GABRB3-219ENST00000636466 TERF2IPQ9NYB0 399 aa18.06■□□□□ 0.48
GABRB3-219ENST00000636466 EXOC6Q8TAG9 804 aa18.05■□□□□ 0.48
GABRB3-219ENST00000636466 MINK1Q8N4C8 1332 aaPredicted RBP18.05■□□□□ 0.48
GABRB3-219ENST00000636466 OSCARQ8IYS5 282 aa18.04■□□□□ 0.48
GABRB3-219ENST00000636466 MYBBP1AQ9BQG0 1328 aaKnown RBP18.04■□□□□ 0.48
GABRB3-219ENST00000636466 KIF15Q9NS87 1388 aa18.04■□□□□ 0.48
GABRB3-219ENST00000636466 APAF1O14727 1248 aa18.04■□□□□ 0.48
GABRB3-219ENST00000636466 KIF7Q2M1P5 1343 aa18.04■□□□□ 0.48
GABRB3-219ENST00000636466 SLC4A10Q6U841 1118 aa18.03■□□□□ 0.48
GABRB3-219ENST00000636466 GZF1Q9H116 711 aaPredicted RBP18.03■□□□□ 0.48
GABRB3-219ENST00000636466 NPHP1O15259 732 aa18.03■□□□□ 0.48
GABRB3-219ENST00000636466 ERICH6BQ5W0A0 696 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms