RNA–Protein interactions for RNA: ENST00000636016.1

EPB41L1-219, Transcript of erythrocyte membrane protein band 4.1 like 1, humanhuman

TSL 2

Gene EPB41L1, Length 6,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L1-219ENST00000636016 WWC1Q8IX03 1113 aa12.58□□□□□ -0.4
EPB41L1-219ENST00000636016 SIN3AQ96ST3 1273 aa12.57□□□□□ -0.4
EPB41L1-219ENST00000636016 PPP4R2Q9NY27 417 aa12.57□□□□□ -0.4
EPB41L1-219ENST00000636016 BCL11BQ9C0K0 894 aaPredicted RBP12.55□□□□□ -0.4
EPB41L1-219ENST00000636016 CHMP4BQ9H444 224 aaKnown RBP12.55□□□□□ -0.4
EPB41L1-219ENST00000636016 TRHP20396 242 aaPredicted RBP12.55□□□□□ -0.4
EPB41L1-219ENST00000636016 GNL2Q13823 731 aaKnown RBP12.55□□□□□ -0.4
EPB41L1-219ENST00000636016 GOLGA2Q08379 1002 aa12.54□□□□□ -0.4
EPB41L1-219ENST00000636016 ZNF771Q7L3S4 317 aaPredicted RBP12.54□□□□□ -0.4
EPB41L1-219ENST00000636016 SLKQ9H2G2 1235 aaPredicted RBP12.54□□□□□ -0.4
EPB41L1-219ENST00000636016 MS4A1P11836 297 aa12.53□□□□□ -0.4
EPB41L1-219ENST00000636016 APBB1O00213 710 aa12.53□□□□□ -0.4
EPB41L1-219ENST00000636016 HDGFP51858 240 aaKnown RBP12.52□□□□□ -0.4
EPB41L1-219ENST00000636016 FOXD4L1Q9NU39 408 aa12.52□□□□□ -0.4
EPB41L1-219ENST00000636016 SOX12O15370 315 aa12.52□□□□□ -0.4
EPB41L1-219ENST00000636016 APPP05067 770 aa12.52□□□□□ -0.41
EPB41L1-219ENST00000636016 HSP90B1P14625 803 aaKnown RBP12.51□□□□□ -0.41
EPB41L1-219ENST00000636016 CCAR2Q8N163 923 aaKnown RBP12.5□□□□□ -0.41
EPB41L1-219ENST00000636016 EEA1Q15075 1411 aa12.5□□□□□ -0.41
EPB41L1-219ENST00000636016 TMF1P82094 1093 aa12.49□□□□□ -0.41
EPB41L1-219ENST00000636016 DCAF11Q8TEB1 546 aa12.49□□□□□ -0.41
EPB41L1-219ENST00000636016 FOXD4L5Q5VV16 416 aaPredicted RBP12.48□□□□□ -0.41
EPB41L1-219ENST00000636016 FOXD4L4Q8WXT5 416 aaPredicted RBP12.48□□□□□ -0.41
EPB41L1-219ENST00000636016 SRPK2P78362 688 aaKnown RBP12.47□□□□□ -0.41
EPB41L1-219ENST00000636016 WRNQ14191 1432 aaPredicted RBP eCLIP12.47□□□□□ -0.41
EPB41L1-219ENST00000636016 KIF27Q86VH2 1401 aa12.47□□□□□ -0.41
EPB41L1-219ENST00000636016 SAFB2Q14151 953 aaKnown RBP eCLIP12.47□□□□□ -0.41
EPB41L1-219ENST00000636016 ERCC6Q03468 1493 aa12.46□□□□□ -0.41
EPB41L1-219ENST00000636016 MLECQ14165 292 aa12.46□□□□□ -0.41
EPB41L1-219ENST00000636016 HOMEZQ8IX15 550 aa12.46□□□□□ -0.41
EPB41L1-219ENST00000636016 NOL8Q76FK4 1167 aaKnown RBP12.46□□□□□ -0.41
EPB41L1-219ENST00000636016 RBM19Q9Y4C8 960 aaKnown RBP12.46□□□□□ -0.42
EPB41L1-219ENST00000636016 MORC1Q86VD1 984 aa12.46□□□□□ -0.42
EPB41L1-219ENST00000636016 CCNB3Q8WWL7 1395 aa12.46□□□□□ -0.42
EPB41L1-219ENST00000636016 DHX37Q8IY37 1157 aaKnown RBP12.45□□□□□ -0.42
EPB41L1-219ENST00000636016 MYO15BQ96JP2 1530 aa12.45□□□□□ -0.42
EPB41L1-219ENST00000636016 MCCP23508 829 aa12.45□□□□□ -0.42
EPB41L1-219ENST00000636016 KANK1Q14678 1352 aa12.44□□□□□ -0.42
EPB41L1-219ENST00000636016 GOLGA6L3A6NEY3 463 aa12.43□□□□□ -0.42
EPB41L1-219ENST00000636016 USP35Q9P2H5 1018 aa12.43□□□□□ -0.42
EPB41L1-219ENST00000636016 TNIKQ9UKE5 1360 aa12.42□□□□□ -0.42
EPB41L1-219ENST00000636016 RTF1Q92541 710 aaKnown RBP12.42□□□□□ -0.42
EPB41L1-219ENST00000636016 PLCD4Q9BRC7 762 aa12.42□□□□□ -0.42
EPB41L1-219ENST00000636016 CEP164Q9UPV0 1460 aa12.42□□□□□ -0.42
EPB41L1-219ENST00000636016 MAPK8IP2Q13387 824 aaPredicted RBP12.41□□□□□ -0.42
EPB41L1-219ENST00000636016 ZNF592Q92610 1267 aa12.41□□□□□ -0.42
EPB41L1-219ENST00000636016 PES1O00541 588 aaKnown RBP12.4□□□□□ -0.42
EPB41L1-219ENST00000636016 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.4□□□□□ -0.42
EPB41L1-219ENST00000636016 BAZ1BQ9UIG0 1483 aaKnown RBP12.4□□□□□ -0.42
EPB41L1-219ENST00000636016 STK26Q9P289 416 aa12.39□□□□□ -0.43
EPB41L1-219ENST00000636016 RRP12Q5JTH9 1297 aaKnown RBP12.39□□□□□ -0.43
EPB41L1-219ENST00000636016 FOXD4L6Q3SYB3 417 aaPredicted RBP12.38□□□□□ -0.43
EPB41L1-219ENST00000636016 FOXD4L3Q6VB84 417 aaPredicted RBP12.38□□□□□ -0.43
EPB41L1-219ENST00000636016 EIF4G1Q04637 1599 aaKnown RBP12.37□□□□□ -0.43
EPB41L1-219ENST00000636016 FAM13BQ9NYF5 915 aa12.37□□□□□ -0.43
EPB41L1-219ENST00000636016 TMX4Q9H1E5 349 aaPredicted RBP12.37□□□□□ -0.43
EPB41L1-219ENST00000636016 HSPA5P11021 654 aaKnown RBP12.36□□□□□ -0.43
EPB41L1-219ENST00000636016 GBP4Q96PP9 640 aa12.36□□□□□ -0.43
EPB41L1-219ENST00000636016 TPM4P67936 248 aa12.36□□□□□ -0.43
EPB41L1-219ENST00000636016 ZNF330Q9Y3S2 320 aaPredicted RBP12.36□□□□□ -0.43
EPB41L1-219ENST00000636016 KIAA1211Q6ZU35 1233 aa12.36□□□□□ -0.43
EPB41L1-219ENST00000636016 HDGFL2Q7Z4V5 671 aaPredicted RBP12.36□□□□□ -0.43
EPB41L1-219ENST00000636016 PAK3O75914 559 aaPredicted RBP12.35□□□□□ -0.43
EPB41L1-219ENST00000636016 GGT6Q6P531 493 aa12.35□□□□□ -0.43
EPB41L1-219ENST00000636016 RASSF8Q8NHQ8 419 aa12.35□□□□□ -0.43
EPB41L1-219ENST00000636016 CEP89Q96ST8 783 aa12.35□□□□□ -0.43
EPB41L1-219ENST00000636016 RB1CC1Q8TDY2 1594 aa12.35□□□□□ -0.43
EPB41L1-219ENST00000636016 CFAP44Q96MT7 982 aa12.35□□□□□ -0.43
EPB41L1-219ENST00000636016 IPO8O15397 1037 aaKnown RBP12.34□□□□□ -0.43
EPB41L1-219ENST00000636016 KTN1Q86UP2 1357 aaKnown RBP12.34□□□□□ -0.43
EPB41L1-219ENST00000636016 ITPRIPQ8IWB1 547 aa12.34□□□□□ -0.43
EPB41L1-219ENST00000636016 TPM3P06753 285 aa12.34□□□□□ -0.43
EPB41L1-219ENST00000636016 CCDC180Q9P1Z9 1646 aa12.33□□□□□ -0.43
EPB41L1-219ENST00000636016 MFAP1P55081 439 aaKnown RBP12.33□□□□□ -0.44
EPB41L1-219ENST00000636016 CSB-PGBD3P0DP91 1061 aa12.33□□□□□ -0.44
EPB41L1-219ENST00000636016 FOXD1Q16676 465 aa12.32□□□□□ -0.44
EPB41L1-219ENST00000636016 U2AF1L5P0DN76 240 aaPredicted RBP12.32□□□□□ -0.44
EPB41L1-219ENST00000636016 U2AF1Q01081 240 aaKnown RBP eCLIP12.32□□□□□ -0.44
EPB41L1-219ENST00000636016 CCER2I3L3R5 266 aa12.32□□□□□ -0.44
EPB41L1-219ENST00000636016 PKD2Q13563 968 aa12.32□□□□□ -0.44
EPB41L1-219ENST00000636016 MEX3CQ5U5Q3 659 aaKnown RBP12.31□□□□□ -0.44
EPB41L1-219ENST00000636016 VPS53Q5VIR6 699 aa12.31□□□□□ -0.44
EPB41L1-219ENST00000636016 MAP7D2Q96T17 732 aa12.31□□□□□ -0.44
EPB41L1-219ENST00000636016 FHAD1B1AJZ9 1412 aa12.31□□□□□ -0.44
EPB41L1-219ENST00000636016 SKIDA1Q1XH10 827 aa12.31□□□□□ -0.44
EPB41L1-219ENST00000636016 RSPH6AQ9H0K4 717 aa12.3□□□□□ -0.44
EPB41L1-219ENST00000636016 RWDD1Q9H446 243 aaPredicted RBP12.3□□□□□ -0.44
EPB41L1-219ENST00000636016 SLC4A3P48751 1232 aa12.29□□□□□ -0.44
EPB41L1-219ENST00000636016 CCDC9Q9Y3X0 531 aaKnown RBP12.29□□□□□ -0.44
EPB41L1-219ENST00000636016 CALD1Q05682 793 aaKnown RBP12.28□□□□□ -0.44
EPB41L1-219ENST00000636016 HSP90AB3PQ58FF7 597 aa12.28□□□□□ -0.44
EPB41L1-219ENST00000636016 PKNOX2Q96KN3 472 aa12.28□□□□□ -0.44
EPB41L1-219ENST00000636016 RCAN3Q9UKA8 241 aa12.28□□□□□ -0.44
EPB41L1-219ENST00000636016 SYAP1Q96A49 352 aaPredicted RBP12.28□□□□□ -0.44
EPB41L1-219ENST00000636016 KCNA4P22459 653 aa12.28□□□□□ -0.44
EPB41L1-219ENST00000636016 ROCK2O75116 1388 aaKnown RBP12.27□□□□□ -0.44
EPB41L1-219ENST00000636016 SETD5Q9C0A6 1442 aa12.27□□□□□ -0.44
EPB41L1-219ENST00000636016 CARMIL1Q5VZK9 1371 aa12.27□□□□□ -0.44
EPB41L1-219ENST00000636016 CHMP3Q9Y3E7 222 aa12.27□□□□□ -0.45
EPB41L1-219ENST00000636016 FBXW7Q969H0 707 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms