RNA–Protein interactions for RNA: ENST00000635997.1

NEDD4L-238, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 5 BASIC

Gene NEDD4L, Length 4,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-238	ENST00000635997	NUTM2D	Q5VT03	806 aa	Predicted RBP	19.11	■□□□□ 0.65
NEDD4L-238	ENST00000635997	NEUROD2	Q15784	382 aa		19.11	■□□□□ 0.65
NEDD4L-238	ENST00000635997	ZNF608	Q9ULD9	1512 aa	Predicted RBP	19.1	■□□□□ 0.65
NEDD4L-238	ENST00000635997	AFAP1	Q8N556	730 aa		19.09	■□□□□ 0.65
NEDD4L-238	ENST00000635997	PAK3	O75914	559 aa	Predicted RBP	19.08	■□□□□ 0.64
NEDD4L-238	ENST00000635997	KNSTRN	Q9Y448	316 aa		19.07	■□□□□ 0.64
NEDD4L-238	ENST00000635997	CCDC18	Q5T9S5	1454 aa		19.06	■□□□□ 0.64
NEDD4L-238	ENST00000635997	SOX12	O15370	315 aa		19.06	■□□□□ 0.64
NEDD4L-238	ENST00000635997	CCDC136	Q96JN2	1154 aa		19.05	■□□□□ 0.64
NEDD4L-238	ENST00000635997	DNMBP	Q6XZF7	1577 aa		19.05	■□□□□ 0.64
NEDD4L-238	ENST00000635997	SYNJ2	O15056	1496 aa		19.04	■□□□□ 0.64
NEDD4L-238	ENST00000635997	CC2D1B	Q5T0F9	858 aa	Known RBP	19.03	■□□□□ 0.64
NEDD4L-238	ENST00000635997	POGZ	Q7Z3K3	1410 aa		19.03	■□□□□ 0.64
NEDD4L-238	ENST00000635997	ANKRD30A	Q9BXX3	1397 aa		19.02	■□□□□ 0.64
NEDD4L-238	ENST00000635997	ARX	Q96QS3	562 aa		19.02	■□□□□ 0.64
NEDD4L-238	ENST00000635997	NUTM2F	A1L443	756 aa		19.01	■□□□□ 0.63
NEDD4L-238	ENST00000635997	PIP4K2B	P78356	416 aa		19.01	■□□□□ 0.63
NEDD4L-238	ENST00000635997	URB2	Q14146	1524 aa	Known RBP	19	■□□□□ 0.63
NEDD4L-238	ENST00000635997	UNC13A	Q9UPW8	1703 aa		18.99	■□□□□ 0.63
NEDD4L-238	ENST00000635997	ARHGAP35	Q9NRY4	1499 aa		18.99	■□□□□ 0.63
NEDD4L-238	ENST00000635997	SRPK2	P78362	688 aa	Known RBP	18.99	■□□□□ 0.63
NEDD4L-238	ENST00000635997	NUP155	O75694	1391 aa		18.99	■□□□□ 0.63
NEDD4L-238	ENST00000635997	MPHOSPH9	Q99550	1183 aa		18.98	■□□□□ 0.63
NEDD4L-238	ENST00000635997	MAGI1	Q96QZ7	1491 aa	Predicted RBP	18.97	■□□□□ 0.63
NEDD4L-238	ENST00000635997	SETD5	Q9C0A6	1442 aa		18.97	■□□□□ 0.63
NEDD4L-238	ENST00000635997	RAB3GAP2	Q9H2M9	1393 aa		18.96	■□□□□ 0.63
NEDD4L-238	ENST00000635997	CSB-PGBD3	P0DP91	1061 aa		18.96	■□□□□ 0.63
NEDD4L-238	ENST00000635997	SYNJ1	O43426	1573 aa		18.94	■□□□□ 0.62
NEDD4L-238	ENST00000635997	CDCA8	Q53HL2	280 aa		18.94	■□□□□ 0.62
NEDD4L-238	ENST00000635997	ATF3	P18847	181 aa		18.94	■□□□□ 0.62
NEDD4L-238	ENST00000635997	UACA	Q9BZF9	1416 aa		18.93	■□□□□ 0.62
NEDD4L-238	ENST00000635997	CD109	Q6YHK3	1445 aa		18.93	■□□□□ 0.62
NEDD4L-238	ENST00000635997	ANP32A	P39687	249 aa	Known RBP	18.92	■□□□□ 0.62
NEDD4L-238	ENST00000635997	THEMIS	Q8N1K5	641 aa	Predicted RBP	18.92	■□□□□ 0.62
NEDD4L-238	ENST00000635997	NPHP1	O15259	732 aa		18.91	■□□□□ 0.62
NEDD4L-238	ENST00000635997	HSPA5	P11021	654 aa	Known RBP	18.9	■□□□□ 0.62
NEDD4L-238	ENST00000635997	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	18.9	■□□□□ 0.62
NEDD4L-238	ENST00000635997	NGDN	Q8NEJ9	315 aa	Known RBP	18.9	■□□□□ 0.62
NEDD4L-238	ENST00000635997	LAS1L	Q9Y4W2	734 aa	Known RBP	18.9	■□□□□ 0.62
NEDD4L-238	ENST00000635997	PROSER2	Q86WR7	435 aa	Predicted RBP	18.9	■□□□□ 0.62
NEDD4L-238	ENST00000635997	DMRT2	Q9Y5R5	561 aa		18.9	■□□□□ 0.62
NEDD4L-238	ENST00000635997	U2SURP	O15042	1029 aa	Known RBP	18.89	■□□□□ 0.62
NEDD4L-238	ENST00000635997	SUPT16H	Q9Y5B9	1047 aa	Known RBP	18.89	■□□□□ 0.62
NEDD4L-238	ENST00000635997	CFAP53	Q96M91	514 aa		18.89	■□□□□ 0.61
NEDD4L-238	ENST00000635997	TXNDC2	Q86VQ3	553 aa		18.88	■□□□□ 0.61
NEDD4L-238	ENST00000635997	KIAA0586	Q9BVV6	1533 aa		18.88	■□□□□ 0.61
NEDD4L-238	ENST00000635997	CUX1	P39880	1505 aa		18.88	■□□□□ 0.61
NEDD4L-238	ENST00000635997	L3MBTL2	Q969R5	705 aa		18.86	■□□□□ 0.61
NEDD4L-238	ENST00000635997	ANKLE2	Q86XL3	938 aa		18.86	■□□□□ 0.61
NEDD4L-238	ENST00000635997	GRIN2A	Q12879	1464 aa		18.86	■□□□□ 0.61
NEDD4L-238	ENST00000635997	TMF1	P82094	1093 aa		18.85	■□□□□ 0.61
NEDD4L-238	ENST00000635997	SCAPER	Q9BY12	1400 aa		18.83	■□□□□ 0.61
NEDD4L-238	ENST00000635997	HSP90AA1	P07900	732 aa	Known RBP	18.83	■□□□□ 0.6
NEDD4L-238	ENST00000635997	PRDM2	Q13029	1718 aa		18.82	■□□□□ 0.6
NEDD4L-238	ENST00000635997	EIF5B	O60841	1220 aa	Known RBP	18.82	■□□□□ 0.6
NEDD4L-238	ENST00000635997	CEBPA	P49715	358 aa	Predicted RBP	18.81	■□□□□ 0.6
NEDD4L-238	ENST00000635997	ZNF644	Q9H582	1327 aa	Predicted RBP	18.81	■□□□□ 0.6
NEDD4L-238	ENST00000635997	ABCA10	Q8WWZ4	1543 aa		18.8	■□□□□ 0.6
NEDD4L-238	ENST00000635997	NBR1	Q14596	966 aa		18.8	■□□□□ 0.6
NEDD4L-238	ENST00000635997	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	18.8	■□□□□ 0.6
NEDD4L-238	ENST00000635997	VGF	O15240	615 aa	Predicted RBP	18.79	■□□□□ 0.6
NEDD4L-238	ENST00000635997	TSHZ2	Q9NRE2	1034 aa		18.77	■□□□□ 0.6
NEDD4L-238	ENST00000635997	FRAT1	Q92837	279 aa	Predicted RBP	18.77	■□□□□ 0.59
NEDD4L-238	ENST00000635997	MAPK8IP3	Q9UPT6	1336 aa		18.76	■□□□□ 0.59
NEDD4L-238	ENST00000635997	ARHGAP5	Q13017	1502 aa		18.76	■□□□□ 0.59
NEDD4L-238	ENST00000635997	EVA1C	P58658	441 aa		18.76	■□□□□ 0.59
NEDD4L-238	ENST00000635997	UPF2	Q9HAU5	1272 aa	Known RBP	18.75	■□□□□ 0.59
NEDD4L-238	ENST00000635997	NUTM2B	A6NNL0	878 aa	Predicted RBP	18.75	■□□□□ 0.59
NEDD4L-238	ENST00000635997	NUTM2E	B1AL46	878 aa	Predicted RBP	18.75	■□□□□ 0.59
NEDD4L-238	ENST00000635997	NUTM2A	Q8IVF1	878 aa	Predicted RBP	18.75	■□□□□ 0.59
NEDD4L-238	ENST00000635997	NUDC	Q9Y266	331 aa		18.75	■□□□□ 0.59
NEDD4L-238	ENST00000635997	TIMELESS	Q9UNS1	1208 aa		18.74	■□□□□ 0.59
NEDD4L-238	ENST00000635997	UBAP1L	F5GYI3	381 aa		18.73	■□□□□ 0.59
NEDD4L-238	ENST00000635997	MORC1	Q86VD1	984 aa		18.72	■□□□□ 0.59
NEDD4L-238	ENST00000635997	DCAF8L1	A6NGE4	600 aa		18.72	■□□□□ 0.59
NEDD4L-238	ENST00000635997	HSPA2	P54652	639 aa		18.71	■□□□□ 0.59
NEDD4L-238	ENST00000635997	PLB1	Q6P1J6	1458 aa		18.7	■□□□□ 0.58
NEDD4L-238	ENST00000635997	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	18.69	■□□□□ 0.58
NEDD4L-238	ENST00000635997	TRAK1	Q9UPV9	953 aa		18.69	■□□□□ 0.58
NEDD4L-238	ENST00000635997	ROCK2	O75116	1388 aa	Known RBP	18.69	■□□□□ 0.58
NEDD4L-238	ENST00000635997	PSME1	Q06323	249 aa		18.68	■□□□□ 0.58
NEDD4L-238	ENST00000635997	SF3B2	Q13435	895 aa	Known RBP	18.68	■□□□□ 0.58
NEDD4L-238	ENST00000635997	SLC26A8	Q96RN1	970 aa		18.68	■□□□□ 0.58
NEDD4L-238	ENST00000635997	MYH16	Q9H6N6	1097 aa		18.68	■□□□□ 0.58
NEDD4L-238	ENST00000635997	PEG3	Q9GZU2	1588 aa		18.67	■□□□□ 0.58
NEDD4L-238	ENST00000635997	FTSJ3	Q8IY81	847 aa	Known RBP	18.65	■□□□□ 0.58
NEDD4L-238	ENST00000635997	ST20-MTHFS	A0A0A6YYL1	179 aa		18.63	■□□□□ 0.57
NEDD4L-238	ENST00000635997	PPP6R1	Q9UPN7	881 aa		18.63	■□□□□ 0.57
NEDD4L-238	ENST00000635997	TEX14	Q8IWB6	1497 aa		18.62	■□□□□ 0.57
NEDD4L-238	ENST00000635997	KIF15	Q9NS87	1388 aa		18.62	■□□□□ 0.57
NEDD4L-238	ENST00000635997	RGS3	P49796	1198 aa		18.62	■□□□□ 0.57
NEDD4L-238	ENST00000635997	B4GALNT3	Q6L9W6	998 aa		18.61	■□□□□ 0.57
NEDD4L-238	ENST00000635997	TOM1	O60784	492 aa		18.61	■□□□□ 0.57
NEDD4L-238	ENST00000635997	MSH5	O43196	834 aa		18.61	■□□□□ 0.57
NEDD4L-238	ENST00000635997	RBM19	Q9Y4C8	960 aa	Known RBP	18.6	■□□□□ 0.57
NEDD4L-238	ENST00000635997	ASXL2	Q76L83	1435 aa		18.6	■□□□□ 0.57
NEDD4L-238	ENST00000635997	U2AF1L5	P0DN76	240 aa	Predicted RBP	18.6	■□□□□ 0.57
NEDD4L-238	ENST00000635997	U2AF1	Q01081	240 aa	Known RBP eCLIP	18.6	■□□□□ 0.57	5e-7	■■■■□ 23
NEDD4L-238	ENST00000635997	AKNA	Q7Z591	1439 aa		18.6	■□□□□ 0.57
NEDD4L-238	ENST00000635997	TOP2B	Q02880	1626 aa		18.59	■□□□□ 0.57

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