RNA–Protein interactions for RNA: ENST00000635994.1

GABRB3-218, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 5,192 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-218ENST00000635994 GRIN2BQ13224 1484 aa8.11□□□□□ -1.11
GABRB3-218ENST00000635994 DCAF8L1A6NGE4 600 aa8.1□□□□□ -1.11
GABRB3-218ENST00000635994 ANO8Q9HCE9 1232 aaPredicted RBP8.1□□□□□ -1.11
GABRB3-218ENST00000635994 KRI1Q8N9T8 703 aaKnown RBP8.09□□□□□ -1.11
GABRB3-218ENST00000635994 AQRO60306 1485 aaKnown RBP eCLIP8.09□□□□□ -1.11
GABRB3-218ENST00000635994 CALD1Q05682 793 aaKnown RBP8.09□□□□□ -1.11
GABRB3-218ENST00000635994 HTATSF1O43719 755 aaKnown RBP8.08□□□□□ -1.12
GABRB3-218ENST00000635994 RTF1Q92541 710 aaKnown RBP8.08□□□□□ -1.12
GABRB3-218ENST00000635994 JPH4Q96JJ6 628 aa8.08□□□□□ -1.12
GABRB3-218ENST00000635994 RAD54L2Q9Y4B4 1467 aa8.08□□□□□ -1.12
GABRB3-218ENST00000635994 DNTTIP2Q5QJE6 756 aaKnown RBP8.08□□□□□ -1.12
GABRB3-218ENST00000635994 DNMBPQ6XZF7 1577 aa8.08□□□□□ -1.12
GABRB3-218ENST00000635994 G3V3G9 751 aa8.07□□□□□ -1.12
GABRB3-218ENST00000635994 DCAF8Q5TAQ9 597 aa8.07□□□□□ -1.12
GABRB3-218ENST00000635994 GNL2Q13823 731 aaKnown RBP8.07□□□□□ -1.12
GABRB3-218ENST00000635994 NAP1L2Q9ULW6 460 aaPredicted RBP8.06□□□□□ -1.12
GABRB3-218ENST00000635994 RAPGEF2Q9Y4G8 1499 aa8.06□□□□□ -1.12
GABRB3-218ENST00000635994 TOPBP1Q92547 1522 aa8.06□□□□□ -1.12
GABRB3-218ENST00000635994 USP35Q9P2H5 1018 aa8.06□□□□□ -1.12
GABRB3-218ENST00000635994 RGL3Q3MIN7 710 aa8.06□□□□□ -1.12
GABRB3-218ENST00000635994 LAS1LQ9Y4W2 734 aaKnown RBP8.06□□□□□ -1.12
GABRB3-218ENST00000635994 CSB-PGBD3P0DP91 1061 aa8.06□□□□□ -1.12
GABRB3-218ENST00000635994 NCBP3Q53F19 620 aaKnown RBP8.06□□□□□ -1.12
GABRB3-218ENST00000635994 PRM3Q9NNZ6 103 aa8.06□□□□□ -1.12
GABRB3-218ENST00000635994 PTPRGP23470 1445 aa8.05□□□□□ -1.12
GABRB3-218ENST00000635994 CARD11Q9BXL7 1154 aa8.05□□□□□ -1.12
GABRB3-218ENST00000635994 HDGFL2Q7Z4V5 671 aaPredicted RBP8.05□□□□□ -1.12
GABRB3-218ENST00000635994 FHAD1B1AJZ9 1412 aa8.05□□□□□ -1.12
GABRB3-218ENST00000635994 CCDC9Q9Y3X0 531 aaKnown RBP8.03□□□□□ -1.12
GABRB3-218ENST00000635994 PEG3Q9GZU2 1588 aa8.03□□□□□ -1.12
GABRB3-218ENST00000635994 SNAPC4Q5SXM2 1469 aa8.03□□□□□ -1.12
GABRB3-218ENST00000635994 RRP7BPQ9NSQ0 103 aa8.03□□□□□ -1.12
GABRB3-218ENST00000635994 TMF1P82094 1093 aa8.03□□□□□ -1.12
GABRB3-218ENST00000635994 FOXD1Q16676 465 aa8.03□□□□□ -1.12
GABRB3-218ENST00000635994 CHMP4CQ96CF2 233 aa8.03□□□□□ -1.12
GABRB3-218ENST00000635994 FAM69CQ0P6D2 419 aa8.02□□□□□ -1.12
GABRB3-218ENST00000635994 ERICH6BQ5W0A0 696 aa8.02□□□□□ -1.12
GABRB3-218ENST00000635994 KIAA1211Q6ZU35 1233 aa8.02□□□□□ -1.12
GABRB3-218ENST00000635994 U2SURPO15042 1029 aaKnown RBP8.02□□□□□ -1.13
GABRB3-218ENST00000635994 EID1Q9Y6B2 187 aa8.02□□□□□ -1.13
GABRB3-218ENST00000635994 CCNB3Q8WWL7 1395 aa8.02□□□□□ -1.13
GABRB3-218ENST00000635994 IPO8O15397 1037 aaKnown RBP8.02□□□□□ -1.13
GABRB3-218ENST00000635994 PTMSP20962 102 aa8.02□□□□□ -1.13
GABRB3-218ENST00000635994 CEP89Q96ST8 783 aa8.02□□□□□ -1.13
GABRB3-218ENST00000635994 HSP90AB1P08238 724 aaKnown RBP8.01□□□□□ -1.13
GABRB3-218ENST00000635994 MLECQ14165 292 aa8.01□□□□□ -1.13
GABRB3-218ENST00000635994 SRPK2P78362 688 aaKnown RBP8.01□□□□□ -1.13
GABRB3-218ENST00000635994 GPATCH3Q96I76 525 aa8.01□□□□□ -1.13
GABRB3-218ENST00000635994 TPM4P67936 248 aa8□□□□□ -1.13
GABRB3-218ENST00000635994 GORABQ5T7V8 394 aa8□□□□□ -1.13
GABRB3-218ENST00000635994 SYNJ1O43426 1573 aa8□□□□□ -1.13
GABRB3-218ENST00000635994 NOC3LQ8WTT2 800 aaKnown RBP7.99□□□□□ -1.13
GABRB3-218ENST00000635994 TAF7LQ5H9L4 462 aa7.99□□□□□ -1.13
GABRB3-218ENST00000635994 SPAG9O60271 1321 aaKnown RBP7.99□□□□□ -1.13
GABRB3-218ENST00000635994 FMN1Q68DA7 1419 aa7.99□□□□□ -1.13
GABRB3-218ENST00000635994 PLCB2Q00722 1185 aa7.99□□□□□ -1.13
GABRB3-218ENST00000635994 POLA1P09884 1462 aaPredicted RBP7.98□□□□□ -1.13
GABRB3-218ENST00000635994 EFCAB2Q5VUJ9 269 aa7.98□□□□□ -1.13
GABRB3-218ENST00000635994 TNIKQ9UKE5 1360 aa7.98□□□□□ -1.13
GABRB3-218ENST00000635994 WASHC2AQ641Q2 1341 aa7.98□□□□□ -1.13
GABRB3-218ENST00000635994 PRG4Q92954 1404 aaPredicted RBP7.98□□□□□ -1.13
GABRB3-218ENST00000635994 GTF2E1P29083 439 aaPredicted RBP7.98□□□□□ -1.13
GABRB3-218ENST00000635994 HSCBQ8IWL3 235 aa7.98□□□□□ -1.13
GABRB3-218ENST00000635994 SENP3Q9H4L4 574 aaPredicted RBP7.98□□□□□ -1.13
GABRB3-218ENST00000635994 KIF3AQ9Y496 699 aa7.98□□□□□ -1.13
GABRB3-218ENST00000635994 NEUROD2Q15784 382 aa7.97□□□□□ -1.13
GABRB3-218ENST00000635994 MORC1Q86VD1 984 aa7.97□□□□□ -1.13
GABRB3-218ENST00000635994 STK31Q9BXU1 1019 aa7.97□□□□□ -1.13
GABRB3-218ENST00000635994 MAGI1Q96QZ7 1491 aaPredicted RBP7.96□□□□□ -1.13
GABRB3-218ENST00000635994 TAOK2Q9UL54 1235 aa7.96□□□□□ -1.14
GABRB3-218ENST00000635994 SYNJ2O15056 1496 aa7.96□□□□□ -1.14
GABRB3-218ENST00000635994 FRAT1Q92837 279 aaPredicted RBP7.96□□□□□ -1.14
GABRB3-218ENST00000635994 LMOD3Q0VAK6 560 aa7.95□□□□□ -1.14
GABRB3-218ENST00000635994 PAK3O75914 559 aaPredicted RBP7.95□□□□□ -1.14
GABRB3-218ENST00000635994 CSPP1Q1MSJ5 1256 aa7.95□□□□□ -1.14
GABRB3-218ENST00000635994 CTDP1Q9Y5B0 961 aaPredicted RBP7.95□□□□□ -1.14
GABRB3-218ENST00000635994 HMMRO75330 724 aa7.95□□□□□ -1.14
GABRB3-218ENST00000635994 NBR1Q14596 966 aa7.95□□□□□ -1.14
GABRB3-218ENST00000635994 AMOTL1Q8IY63 956 aa7.95□□□□□ -1.14
GABRB3-218ENST00000635994 MARCH6O60337 910 aa7.94□□□□□ -1.14
GABRB3-218ENST00000635994 LRRFIP1Q32MZ4 808 aaKnown RBP7.94□□□□□ -1.14
GABRB3-218ENST00000635994 DRC7Q8IY82 874 aa7.94□□□□□ -1.14
GABRB3-218ENST00000635994 SYAP1Q96A49 352 aaPredicted RBP7.94□□□□□ -1.14
GABRB3-218ENST00000635994 EIF3AQ14152 1382 aaKnown RBP7.94□□□□□ -1.14
GABRB3-218ENST00000635994 NOL10Q9BSC4 688 aaKnown RBP7.94□□□□□ -1.14
GABRB3-218ENST00000635994 CEP162Q5TB80 1403 aa7.94□□□□□ -1.14
GABRB3-218ENST00000635994 URB2Q14146 1524 aaKnown RBP7.94□□□□□ -1.14
GABRB3-218ENST00000635994 ZNF330Q9Y3S2 320 aaPredicted RBP7.94□□□□□ -1.14
GABRB3-218ENST00000635994 RASSF8Q8NHQ8 419 aa7.93□□□□□ -1.14
GABRB3-218ENST00000635994 FRAT2O75474 233 aaPredicted RBP7.93□□□□□ -1.14
GABRB3-218ENST00000635994 HMGB2P26583 209 aaKnown RBP7.93□□□□□ -1.14
GABRB3-218ENST00000635994 WWC1Q8IX03 1113 aa7.93□□□□□ -1.14
GABRB3-218ENST00000635994 TERF2IPQ9NYB0 399 aa7.93□□□□□ -1.14
GABRB3-218ENST00000635994 CUX1P39880 1505 aa7.92□□□□□ -1.14
GABRB3-218ENST00000635994 KIF21AQ7Z4S6 1674 aa7.92□□□□□ -1.14
GABRB3-218ENST00000635994 TRIM34Q9BYJ4 488 aa7.92□□□□□ -1.14
GABRB3-218ENST00000635994 TCEAL9Q9UHQ7 104 aa7.92□□□□□ -1.14
GABRB3-218ENST00000635994 TIMELESSQ9UNS1 1208 aa7.92□□□□□ -1.14
GABRB3-218ENST00000635994 A0A0U1RQG5 324 aaPredicted RBP7.92□□□□□ -1.14
GABRB3-218ENST00000635994 CWC22Q9HCG8 908 aaKnown RBP7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms