RNA–Protein interactions for RNA: ENST00000635832.1

GABRB3-217, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 5,593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-217ENST00000635832 MIER1Q8N108 512 aa12.3□□□□□ -0.44
GABRB3-217ENST00000635832 ZNF330Q9Y3S2 320 aaPredicted RBP12.3□□□□□ -0.44
GABRB3-217ENST00000635832 GORABQ5T7V8 394 aa12.29□□□□□ -0.44
GABRB3-217ENST00000635832 NAP1L5Q96NT1 182 aaPredicted RBP12.29□□□□□ -0.44
GABRB3-217ENST00000635832 NOC3LQ8WTT2 800 aaKnown RBP12.29□□□□□ -0.44
GABRB3-217ENST00000635832 RB1CC1Q8TDY2 1594 aa12.28□□□□□ -0.44
GABRB3-217ENST00000635832 PPP4R2Q9NY27 417 aa12.28□□□□□ -0.44
GABRB3-217ENST00000635832 TAF7LQ5H9L4 462 aa12.28□□□□□ -0.44
GABRB3-217ENST00000635832 PTMSP20962 102 aa12.27□□□□□ -0.45
GABRB3-217ENST00000635832 DCAF11Q8TEB1 546 aa12.27□□□□□ -0.45
GABRB3-217ENST00000635832 GPATCH3Q96I76 525 aa12.27□□□□□ -0.45
GABRB3-217ENST00000635832 TPM4P67936 248 aa12.27□□□□□ -0.45
GABRB3-217ENST00000635832 GGT6Q6P531 493 aa12.26□□□□□ -0.45
GABRB3-217ENST00000635832 SPAG9O60271 1321 aaKnown RBP12.26□□□□□ -0.45
GABRB3-217ENST00000635832 SUPT16HQ9Y5B9 1047 aaKnown RBP12.25□□□□□ -0.45
GABRB3-217ENST00000635832 BAZ1BQ9UIG0 1483 aaKnown RBP12.25□□□□□ -0.45
GABRB3-217ENST00000635832 MSNP26038 577 aaKnown RBP12.25□□□□□ -0.45
GABRB3-217ENST00000635832 STK31Q9BXU1 1019 aa12.25□□□□□ -0.45
GABRB3-217ENST00000635832 SAFB2Q14151 953 aaKnown RBP eCLIP12.24□□□□□ -0.45
GABRB3-217ENST00000635832 EID1Q9Y6B2 187 aa12.24□□□□□ -0.45
GABRB3-217ENST00000635832 STK26Q9P289 416 aa12.24□□□□□ -0.45
GABRB3-217ENST00000635832 WRNQ14191 1432 aaPredicted RBP eCLIP12.23□□□□□ -0.45
GABRB3-217ENST00000635832 SENP3-EIF4A1A0A087X0R7 540 aa12.23□□□□□ -0.45
GABRB3-217ENST00000635832 FHAD1B1AJZ9 1412 aa12.23□□□□□ -0.45
GABRB3-217ENST00000635832 CEP89Q96ST8 783 aa12.23□□□□□ -0.45
GABRB3-217ENST00000635832 GTF2E1P29083 439 aaPredicted RBP12.22□□□□□ -0.45
GABRB3-217ENST00000635832 CHMP3Q9Y3E7 222 aa12.21□□□□□ -0.45
GABRB3-217ENST00000635832 CEP162Q5TB80 1403 aa12.21□□□□□ -0.46
GABRB3-217ENST00000635832 RASSF8Q8NHQ8 419 aa12.21□□□□□ -0.46
GABRB3-217ENST00000635832 KRI1Q8N9T8 703 aaKnown RBP12.2□□□□□ -0.46
GABRB3-217ENST00000635832 CEP164Q9UPV0 1460 aa12.2□□□□□ -0.46
GABRB3-217ENST00000635832 SYAP1Q96A49 352 aaPredicted RBP12.2□□□□□ -0.46
GABRB3-217ENST00000635832 USP35Q9P2H5 1018 aa12.2□□□□□ -0.46
GABRB3-217ENST00000635832 HMMRO75330 724 aa12.19□□□□□ -0.46
GABRB3-217ENST00000635832 CARMIL2Q6F5E8 1435 aa12.19□□□□□ -0.46
GABRB3-217ENST00000635832 FRAT2O75474 233 aaPredicted RBP12.19□□□□□ -0.46
GABRB3-217ENST00000635832 GBP4Q96PP9 640 aa12.19□□□□□ -0.46
GABRB3-217ENST00000635832 MARCH6O60337 910 aa12.18□□□□□ -0.46
GABRB3-217ENST00000635832 KTN1Q86UP2 1357 aaKnown RBP12.18□□□□□ -0.46
GABRB3-217ENST00000635832 APBB1O00213 710 aa12.18□□□□□ -0.46
GABRB3-217ENST00000635832 EIF3AQ14152 1382 aaKnown RBP12.18□□□□□ -0.46
GABRB3-217ENST00000635832 CSPP1Q1MSJ5 1256 aa12.18□□□□□ -0.46
GABRB3-217ENST00000635832 RWDD1Q9H446 243 aaPredicted RBP12.18□□□□□ -0.46
GABRB3-217ENST00000635832 A0A0U1RQG5 324 aaPredicted RBP12.17□□□□□ -0.46
GABRB3-217ENST00000635832 U2AF1L5P0DN76 240 aaPredicted RBP12.17□□□□□ -0.46
GABRB3-217ENST00000635832 U2AF1Q01081 240 aaKnown RBP eCLIP12.17□□□□□ -0.46
GABRB3-217ENST00000635832 NOP58Q9Y2X3 529 aaKnown RBP12.17□□□□□ -0.46
GABRB3-217ENST00000635832 HSP90B1P14625 803 aaKnown RBP12.17□□□□□ -0.46
GABRB3-217ENST00000635832 TERF2IPQ9NYB0 399 aa12.17□□□□□ -0.46
GABRB3-217ENST00000635832 EIF4G1Q04637 1599 aaKnown RBP12.17□□□□□ -0.46
GABRB3-217ENST00000635832 EFCAB2Q5VUJ9 269 aa12.17□□□□□ -0.46
GABRB3-217ENST00000635832 TIMELESSQ9UNS1 1208 aa12.17□□□□□ -0.46
GABRB3-217ENST00000635832 LMOD3Q0VAK6 560 aa12.16□□□□□ -0.46
GABRB3-217ENST00000635832 KIF3AQ9Y496 699 aa12.16□□□□□ -0.46
GABRB3-217ENST00000635832 VPS53Q5VIR6 699 aa12.16□□□□□ -0.46
GABRB3-217ENST00000635832 NGDNQ8NEJ9 315 aaKnown RBP12.16□□□□□ -0.46
GABRB3-217ENST00000635832 CHMP4CQ96CF2 233 aa12.15□□□□□ -0.46
GABRB3-217ENST00000635832 ITPRIPQ8IWB1 547 aa12.14□□□□□ -0.47
GABRB3-217ENST00000635832 TNIKQ9UKE5 1360 aa12.13□□□□□ -0.47
GABRB3-217ENST00000635832 GOLGA6L1Q8N7Z2 621 aa12.13□□□□□ -0.47
GABRB3-217ENST00000635832 TOMM22Q9NS69 142 aa12.13□□□□□ -0.47
GABRB3-217ENST00000635832 AMPHP49418 695 aa12.12□□□□□ -0.47
GABRB3-217ENST00000635832 CTDP1Q9Y5B0 961 aaPredicted RBP12.12□□□□□ -0.47
GABRB3-217ENST00000635832 TPM3P06753 285 aa12.12□□□□□ -0.47
GABRB3-217ENST00000635832 PMFBP1Q8TBY8 1022 aa12.11□□□□□ -0.47
GABRB3-217ENST00000635832 SIN3AQ96ST3 1273 aa12.11□□□□□ -0.47
GABRB3-217ENST00000635832 AMOTL1Q8IY63 956 aa12.11□□□□□ -0.47
GABRB3-217ENST00000635832 NOL10Q9BSC4 688 aaKnown RBP12.11□□□□□ -0.47
GABRB3-217ENST00000635832 TRIM6-TRIM34B2RNG4 842 aa12.1□□□□□ -0.47
GABRB3-217ENST00000635832 TRIM34Q9BYJ4 488 aa12.1□□□□□ -0.47
GABRB3-217ENST00000635832 TCEAL9Q9UHQ7 104 aa12.1□□□□□ -0.47
GABRB3-217ENST00000635832 DCAF8L1A6NGE4 600 aa12.1□□□□□ -0.47
GABRB3-217ENST00000635832 PKD2Q13563 968 aa12.1□□□□□ -0.47
GABRB3-217ENST00000635832 RALBP1Q15311 655 aa12.09□□□□□ -0.47
GABRB3-217ENST00000635832 PDE4CQ08493 712 aa12.09□□□□□ -0.47
GABRB3-217ENST00000635832 CARMIL1Q5VZK9 1371 aa12.09□□□□□ -0.47
GABRB3-217ENST00000635832 MSH5O43196 834 aa12.08□□□□□ -0.47
GABRB3-217ENST00000635832 SPRYD3Q8NCJ5 442 aa12.08□□□□□ -0.47
GABRB3-217ENST00000635832 ROCK2O75116 1388 aaKnown RBP12.08□□□□□ -0.48
GABRB3-217ENST00000635832 LRRFIP1Q32MZ4 808 aaKnown RBP12.08□□□□□ -0.48
GABRB3-217ENST00000635832 EVA1CP58658 441 aa12.08□□□□□ -0.48
GABRB3-217ENST00000635832 AKAP17AQ02040 695 aaKnown RBP12.07□□□□□ -0.48
GABRB3-217ENST00000635832 TCERG1O14776 1098 aaKnown RBP12.07□□□□□ -0.48
GABRB3-217ENST00000635832 TPM2P07951 284 aa12.07□□□□□ -0.48
GABRB3-217ENST00000635832 B4GALNT3Q6L9W6 998 aa12.07□□□□□ -0.48
GABRB3-217ENST00000635832 AEBP2Q6ZN18 517 aaPredicted RBP12.07□□□□□ -0.48
GABRB3-217ENST00000635832 SF3A1Q15459 793 aaKnown RBP12.06□□□□□ -0.48
GABRB3-217ENST00000635832 SMC4Q9NTJ3 1288 aa12.06□□□□□ -0.48
GABRB3-217ENST00000635832 ANKRD30AQ9BXX3 1397 aa12.06□□□□□ -0.48
GABRB3-217ENST00000635832 KIF16BQ96L93 1317 aa12.06□□□□□ -0.48
GABRB3-217ENST00000635832 CREBRFQ8IUR6 639 aa12.06□□□□□ -0.48
GABRB3-217ENST00000635832 CCER2I3L3R5 266 aa12.05□□□□□ -0.48
GABRB3-217ENST00000635832 TSR1Q2NL82 804 aaKnown RBP12.05□□□□□ -0.48
GABRB3-217ENST00000635832 SLC4A10Q6U841 1118 aa12.05□□□□□ -0.48
GABRB3-217ENST00000635832 CNKSR2Q8WXI2 1034 aa12.05□□□□□ -0.48
GABRB3-217ENST00000635832 C1orf141Q5JVX7 400 aa12.05□□□□□ -0.48
GABRB3-217ENST00000635832 CWC22Q9HCG8 908 aaKnown RBP12.05□□□□□ -0.48
GABRB3-217ENST00000635832 MEX3CQ5U5Q3 659 aaKnown RBP12.05□□□□□ -0.48
GABRB3-217ENST00000635832 SYNE3Q6ZMZ3 975 aa12.05□□□□□ -0.48
GABRB3-217ENST00000635832 KIF3BO15066 747 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms