RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 ZMYM4Q5VZL5 1548 aa25.52■■□□□ 1.68
SNRNP48-203ENST00000634363 HECW1Q76N89 1606 aa25.52■■□□□ 1.68
SNRNP48-203ENST00000634363 EFCAB2Q5VUJ9 269 aa25.51■■□□□ 1.67
SNRNP48-203ENST00000634363 FBXO41Q8TF61 875 aa25.51■■□□□ 1.67
SNRNP48-203ENST00000634363 ARHGAP35Q9NRY4 1499 aa25.51■■□□□ 1.67
SNRNP48-203ENST00000634363 LMTK3Q96Q04 1460 aa25.5■■□□□ 1.67
SNRNP48-203ENST00000634363 SIGLEC1Q9BZZ2 1709 aa25.49■■□□□ 1.67
SNRNP48-203ENST00000634363 MAGI2Q86UL8 1455 aa25.49■■□□□ 1.67
SNRNP48-203ENST00000634363 HSPA2P54652 639 aa25.48■■□□□ 1.67
SNRNP48-203ENST00000634363 MYO5CQ9NQX4 1742 aa25.48■■□□□ 1.67
SNRNP48-203ENST00000634363 MYT1LQ9UL68 1186 aa25.45■■□□□ 1.66
SNRNP48-203ENST00000634363 KIF14Q15058 1648 aa25.43■■□□□ 1.66
SNRNP48-203ENST00000634363 FER1L4A9Z1Z3 1794 aa25.41■■□□□ 1.66
SNRNP48-203ENST00000634363 ATP10AO60312 1499 aa25.41■■□□□ 1.66
SNRNP48-203ENST00000634363 AFAP1Q8N556 730 aa25.39■■□□□ 1.66
SNRNP48-203ENST00000634363 CLIP1P30622 1438 aa25.38■■□□□ 1.65
SNRNP48-203ENST00000634363 TROQ12816 1431 aaPredicted RBP25.38■■□□□ 1.65
SNRNP48-203ENST00000634363 ARHGAP5Q13017 1502 aa25.38■■□□□ 1.65
SNRNP48-203ENST00000634363 LRRIQ1Q96JM4 1722 aa25.37■■□□□ 1.65
SNRNP48-203ENST00000634363 C9orf84Q5VXU9 1444 aa25.36■■□□□ 1.65
SNRNP48-203ENST00000634363 CEBPAP49715 358 aaPredicted RBP25.34■■□□□ 1.65
SNRNP48-203ENST00000634363 ZNF518AQ6AHZ1 1483 aa25.33■■□□□ 1.65
SNRNP48-203ENST00000634363 ARHGEF12Q9NZN5 1544 aa25.29■■□□□ 1.64
SNRNP48-203ENST00000634363 CDC42BPBQ9Y5S2 1711 aa25.29■■□□□ 1.64
SNRNP48-203ENST00000634363 KDM5CP41229 1560 aa25.24■■□□□ 1.63
SNRNP48-203ENST00000634363 CASKIN1Q8WXD9 1431 aa25.23■■□□□ 1.63
SNRNP48-203ENST00000634363 PREX1Q8TCU6 1659 aa25.22■■□□□ 1.63
SNRNP48-203ENST00000634363 CCDC18Q5T9S5 1454 aa25.21■■□□□ 1.63
SNRNP48-203ENST00000634363 ESF1Q9H501 851 aaKnown RBP25.21■■□□□ 1.63
SNRNP48-203ENST00000634363 PREX2Q70Z35 1606 aa25.2■■□□□ 1.62
SNRNP48-203ENST00000634363 DIP2CQ9Y2E4 1556 aa25.2■■□□□ 1.62
SNRNP48-203ENST00000634363 CERKQ8TCT0 537 aa25.2■■□□□ 1.62
SNRNP48-203ENST00000634363 ZNF777Q9ULD5 760 aaPredicted RBP25.2■■□□□ 1.62
SNRNP48-203ENST00000634363 TRAPPC8Q9Y2L5 1435 aa25.2■■□□□ 1.62
SNRNP48-203ENST00000634363 MLH3Q9UHC1 1453 aa25.17■■□□□ 1.62
SNRNP48-203ENST00000634363 ABCA6Q8N139 1617 aa25.17■■□□□ 1.62
SNRNP48-203ENST00000634363 ABCC1P33527 1531 aa25.15■■□□□ 1.62
SNRNP48-203ENST00000634363 CDC42BPAQ5VT25 1732 aa25.15■■□□□ 1.62
SNRNP48-203ENST00000634363 ITSN2Q9NZM3 1697 aa25.14■■□□□ 1.62
SNRNP48-203ENST00000634363 SETD1BQ9UPS6 1966 aaKnown RBP25.14■■□□□ 1.61
SNRNP48-203ENST00000634363 UHRF1BP1Q6BDS2 1440 aa25.12■■□□□ 1.61
SNRNP48-203ENST00000634363 REREQ9P2R6 1566 aa25.11■■□□□ 1.61
SNRNP48-203ENST00000634363 DMRT2Q9Y5R5 561 aa25.11■■□□□ 1.61
SNRNP48-203ENST00000634363 C3P01024 1663 aa25.1■■□□□ 1.61
SNRNP48-203ENST00000634363 FYCO1Q9BQS8 1478 aa25.09■■□□□ 1.61
SNRNP48-203ENST00000634363 KIDINS220Q9ULH0 1771 aa25.09■■□□□ 1.61
SNRNP48-203ENST00000634363 HNRNPMP52272 730 aaKnown RBP eCLIP25.09■■□□□ 1.61
SNRNP48-203ENST00000634363 STRCQ7RTU9 1775 aa25.08■■□□□ 1.61
SNRNP48-203ENST00000634363 AGLP35573 1532 aa25.07■■□□□ 1.6
SNRNP48-203ENST00000634363 SPAG9O60271 1321 aaKnown RBP25.04■■□□□ 1.6
SNRNP48-203ENST00000634363 GPATCH8Q9UKJ3 1502 aaKnown RBP25.03■■□□□ 1.6
SNRNP48-203ENST00000634363 SAMD9LQ8IVG5 1584 aa25.03■■□□□ 1.6
SNRNP48-203ENST00000634363 CFDP1Q9UEE9 299 aaPredicted RBP25.03■■□□□ 1.6
SNRNP48-203ENST00000634363 SYCP2Q9BX26 1530 aa25.02■■□□□ 1.6
SNRNP48-203ENST00000634363 SUPT6HQ7KZ85 1726 aaKnown RBP25■■□□□ 1.59
SNRNP48-203ENST00000634363 CNTLNQ9NXG0 1405 aa24.98■■□□□ 1.59
SNRNP48-203ENST00000634363 CCNB3Q8WWL7 1395 aa24.98■■□□□ 1.59
SNRNP48-203ENST00000634363 MTUS2Q5JR59 1369 aa24.96■■□□□ 1.59
SNRNP48-203ENST00000634363 ZMYM3Q14202 1370 aa24.93■■□□□ 1.58
SNRNP48-203ENST00000634363 GGT6Q6P531 493 aa24.92■■□□□ 1.58
SNRNP48-203ENST00000634363 PTPRTO14522 1441 aa24.92■■□□□ 1.58
SNRNP48-203ENST00000634363 ATP7AQ04656 1500 aa24.91■■□□□ 1.58
SNRNP48-203ENST00000634363 PLEKHH2Q8IVE3 1493 aa24.91■■□□□ 1.58
SNRNP48-203ENST00000634363 KIAA1107Q9UPP5 1409 aa24.91■■□□□ 1.58
SNRNP48-203ENST00000634363 ZNF644Q9H582 1327 aaPredicted RBP24.89■■□□□ 1.58
SNRNP48-203ENST00000634363 A2MP01023 1474 aa24.89■■□□□ 1.57
SNRNP48-203ENST00000634363 MROH2AA6NES4 1674 aa24.88■■□□□ 1.57
SNRNP48-203ENST00000634363 CLTCQ00610 1675 aaKnown RBP24.88■■□□□ 1.57
SNRNP48-203ENST00000634363 NPATQ14207 1427 aa24.86■■□□□ 1.57
SNRNP48-203ENST00000634363 INO80Q9ULG1 1556 aaPredicted RBP24.85■■□□□ 1.57
SNRNP48-203ENST00000634363 CAMSAP1Q5T5Y3 1602 aa24.85■■□□□ 1.57
SNRNP48-203ENST00000634363 NCOA1Q15788 1441 aa24.85■■□□□ 1.57
SNRNP48-203ENST00000634363 NCKAP5LQ9HCH0 1330 aa24.85■■□□□ 1.57
SNRNP48-203ENST00000634363 PLXNC1O60486 1568 aa24.8■■□□□ 1.56
SNRNP48-203ENST00000634363 TIAM1Q13009 1591 aa24.8■■□□□ 1.56
SNRNP48-203ENST00000634363 ADGBQ8N7X0 1667 aa24.79■■□□□ 1.56
SNRNP48-203ENST00000634363 LTBP4Q8N2S1 1624 aa24.78■■□□□ 1.56
SNRNP48-203ENST00000634363 DISP3Q9P2K9 1392 aa24.78■■□□□ 1.56
SNRNP48-203ENST00000634363 EHBP1L1Q8N3D4 1523 aa24.77■■□□□ 1.56
SNRNP48-203ENST00000634363 PPP6R1Q9UPN7 881 aa24.75■■□□□ 1.55
SNRNP48-203ENST00000634363 PTPRKQ15262 1439 aa24.75■■□□□ 1.55
SNRNP48-203ENST00000634363 MBD5Q9P267 1494 aa24.75■■□□□ 1.55
SNRNP48-203ENST00000634363 CEP162Q5TB80 1403 aa24.74■■□□□ 1.55
SNRNP48-203ENST00000634363 MYO3AQ8NEV4 1616 aa24.74■■□□□ 1.55
SNRNP48-203ENST00000634363 LOC105371045A0A1W2PR82 267 aa24.73■■□□□ 1.55
SNRNP48-203ENST00000634363 ZNF335Q9H4Z2 1342 aaPredicted RBP24.72■■□□□ 1.55
SNRNP48-203ENST00000634363 KIF3BO15066 747 aa24.72■■□□□ 1.55
SNRNP48-203ENST00000634363 PKD2Q13563 968 aa24.71■■□□□ 1.55
SNRNP48-203ENST00000634363 CEP170BQ9Y4F5 1589 aaPredicted RBP24.71■■□□□ 1.55
SNRNP48-203ENST00000634363 RTEL1-TNFRSF6BF6WH68 1400 aa24.7■■□□□ 1.55
SNRNP48-203ENST00000634363 DHX29Q7Z478 1369 aaKnown RBP24.7■■□□□ 1.55
SNRNP48-203ENST00000634363 ZNF142P52746 1687 aaPredicted RBP24.69■■□□□ 1.54
SNRNP48-203ENST00000634363 ILDR2Q71H61 639 aa24.67■■□□□ 1.54
SNRNP48-203ENST00000634363 NCOA2Q15596 1464 aa24.66■■□□□ 1.54
SNRNP48-203ENST00000634363 IQSEC2Q5JU85 1478 aa24.66■■□□□ 1.54
SNRNP48-203ENST00000634363 FBXO31Q5XUX0 539 aaPredicted RBP24.66■■□□□ 1.54
SNRNP48-203ENST00000634363 PLA2R1Q13018 1463 aa24.65■■□□□ 1.54
SNRNP48-203ENST00000634363 RSPH4AQ5TD94 716 aa24.65■■□□□ 1.54
SNRNP48-203ENST00000634363 CAMSAP2Q08AD1 1489 aa24.64■■□□□ 1.54
SNRNP48-203ENST00000634363 UBAP1LF5GYI3 381 aa24.64■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 135.8 ms