RNA–Protein interactions for RNA: ENST00000631357.2

CHTF18-220, Transcript of chromosome transmission fidelity factor 18, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHTF18, Length 3,555 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTF18-220ENST00000631357 CDK11AQ9UQ88 783 aaPredicted RBP23.21■■□□□ 1.31
CHTF18-220ENST00000631357 KIAA0556O60303 1618 aa23.19■■□□□ 1.3
CHTF18-220ENST00000631357 ABCC5O15440 1437 aa23.16■■□□□ 1.3
CHTF18-220ENST00000631357 TCOF1Q13428 1488 aaKnown RBP23.16■■□□□ 1.3
CHTF18-220ENST00000631357 POLR3GLQ9BT43 218 aa23.15■■□□□ 1.3
CHTF18-220ENST00000631357 DAPK1P53355 1430 aa23.15■■□□□ 1.3
CHTF18-220ENST00000631357 NBPF8Q3BBV2 869 aa23.14■■□□□ 1.29
CHTF18-220ENST00000631357 C11orf95C9JLR9 678 aaPredicted RBP23.14■■□□□ 1.29
CHTF18-220ENST00000631357 CEP170Q5SW79 1584 aa23.13■■□□□ 1.29
CHTF18-220ENST00000631357 WASHC2AQ641Q2 1341 aa23.12■■□□□ 1.29
CHTF18-220ENST00000631357 MIA2Q96PC5 1412 aa23.12■■□□□ 1.29
CHTF18-220ENST00000631357 FKBP8Q14318 412 aa23.11■■□□□ 1.29
CHTF18-220ENST00000631357 KDM5BQ9UGL1 1544 aa23.1■■□□□ 1.29
CHTF18-220ENST00000631357 RAPGEF6Q8TEU7 1601 aa23.09■■□□□ 1.29
CHTF18-220ENST00000631357 EIF4G2P78344 907 aaKnown RBP eCLIP23.08■■□□□ 1.29
CHTF18-220ENST00000631357 SYNJ2O15056 1496 aa23.07■■□□□ 1.28
CHTF18-220ENST00000631357 SENP3-EIF4A1A0A087X0R7 540 aa23.06■■□□□ 1.28
CHTF18-220ENST00000631357 PLEKHD1A6NEE1 506 aa23.06■■□□□ 1.28
CHTF18-220ENST00000631357 CCDC184Q52MB2 194 aa23.06■■□□□ 1.28
CHTF18-220ENST00000631357 HNRNPMP52272 730 aaKnown RBP eCLIP23.05■■□□□ 1.281e-7■■■□□ 17.2
CHTF18-220ENST00000631357 TROQ12816 1431 aaPredicted RBP23.04■■□□□ 1.28
CHTF18-220ENST00000631357 KIF14Q15058 1648 aa23.03■■□□□ 1.28
CHTF18-220ENST00000631357 PKD2Q13563 968 aa23.02■■□□□ 1.28
CHTF18-220ENST00000631357 MAGI1Q96QZ7 1491 aaPredicted RBP23.01■■□□□ 1.27
CHTF18-220ENST00000631357 HNRNPUQ00839 825 aaKnown RBP eCLIP23.01■■□□□ 1.27
CHTF18-220ENST00000631357 CAMSAP2Q08AD1 1489 aa23■■□□□ 1.27
CHTF18-220ENST00000631357 CARMIL2Q6F5E8 1435 aa23■■□□□ 1.27
CHTF18-220ENST00000631357 ANKRD30BQ9BXX2 1392 aa23■■□□□ 1.27
CHTF18-220ENST00000631357 GCC2Q8IWJ2 1684 aa23■■□□□ 1.27
CHTF18-220ENST00000631357 GPATCH8Q9UKJ3 1502 aaKnown RBP23■■□□□ 1.27
CHTF18-220ENST00000631357 IRX6P78412 446 aaPredicted RBP22.99■■□□□ 1.27
CHTF18-220ENST00000631357 KDM2AQ9Y2K7 1162 aa22.98■■□□□ 1.27
CHTF18-220ENST00000631357 CCER2I3L3R5 266 aa22.97■■□□□ 1.27
CHTF18-220ENST00000631357 AKNAQ7Z591 1439 aa22.95■■□□□ 1.26
CHTF18-220ENST00000631357 FAM9BQ8IZU0 186 aa22.94■■□□□ 1.26
CHTF18-220ENST00000631357 NCOA1Q15788 1441 aa22.93■■□□□ 1.26
CHTF18-220ENST00000631357 DNMT1P26358 1616 aaKnown RBP22.93■■□□□ 1.26
CHTF18-220ENST00000631357 ROCK1Q13464 1354 aa22.92■■□□□ 1.26
CHTF18-220ENST00000631357 ATP10BO94823 1461 aa22.91■■□□□ 1.26
CHTF18-220ENST00000631357 NUP160Q12769 1436 aa22.91■■□□□ 1.26
CHTF18-220ENST00000631357 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.9■■□□□ 1.261e-6■■□□□ 14.5
CHTF18-220ENST00000631357 NUP155O75694 1391 aa22.89■■□□□ 1.26
CHTF18-220ENST00000631357 TSPY4P0CV99 314 aa22.89■■□□□ 1.25
CHTF18-220ENST00000631357 TSPY10P0CW01 314 aa22.89■■□□□ 1.25
CHTF18-220ENST00000631357 PZPP20742 1482 aa22.87■■□□□ 1.25
CHTF18-220ENST00000631357 PTPRGP23470 1445 aa22.87■■□□□ 1.25
CHTF18-220ENST00000631357 RPRD2Q5VT52 1461 aaKnown RBP22.87■■□□□ 1.25
CHTF18-220ENST00000631357 MYT1Q01538 1121 aa22.86■■□□□ 1.25
CHTF18-220ENST00000631357 KIF7Q2M1P5 1343 aa22.85■■□□□ 1.25
CHTF18-220ENST00000631357 ANKRD30AQ9BXX3 1397 aa22.85■■□□□ 1.25
CHTF18-220ENST00000631357 NEFLP07196 543 aa22.85■■□□□ 1.25
CHTF18-220ENST00000631357 ANKRD50Q9ULJ7 1429 aa22.84■■□□□ 1.25
CHTF18-220ENST00000631357 CCDC7Q96M83 1385 aa22.84■■□□□ 1.25
CHTF18-220ENST00000631357 MRS2Q9HD23 443 aa22.83■■□□□ 1.24
CHTF18-220ENST00000631357 TEX14Q8IWB6 1497 aa22.82■■□□□ 1.24
CHTF18-220ENST00000631357 RGL3Q3MIN7 710 aa22.82■■□□□ 1.24
CHTF18-220ENST00000631357 TSHZ2Q9NRE2 1034 aa22.8■■□□□ 1.24
CHTF18-220ENST00000631357 PRKRIP1Q9H875 184 aaPredicted RBP22.79■■□□□ 1.24
CHTF18-220ENST00000631357 C9orf84Q5VXU9 1444 aa22.79■■□□□ 1.24
CHTF18-220ENST00000631357 DCAF11Q8TEB1 546 aa22.78■■□□□ 1.24
CHTF18-220ENST00000631357 CNTLNQ9NXG0 1405 aa22.76■■□□□ 1.23
CHTF18-220ENST00000631357 KIF15Q9NS87 1388 aa22.76■■□□□ 1.23
CHTF18-220ENST00000631357 KIAA1107Q9UPP5 1409 aa22.75■■□□□ 1.23
CHTF18-220ENST00000631357 ABCA8O94911 1581 aa22.73■■□□□ 1.23
CHTF18-220ENST00000631357 CARD11Q9BXL7 1154 aa22.72■■□□□ 1.23
CHTF18-220ENST00000631357 ABCC10Q5T3U5 1492 aa22.72■■□□□ 1.23
CHTF18-220ENST00000631357 USP47Q96K76 1375 aa22.72■■□□□ 1.23
CHTF18-220ENST00000631357 ERCC6L2Q5T890 1561 aa22.7■■□□□ 1.23
CHTF18-220ENST00000631357 ITSN2Q9NZM3 1697 aa22.7■■□□□ 1.22
CHTF18-220ENST00000631357 CDC42BPAQ5VT25 1732 aa22.69■■□□□ 1.22
CHTF18-220ENST00000631357 ST20-MTHFSA0A0A6YYL1 179 aa22.66■■□□□ 1.22
CHTF18-220ENST00000631357 SPATA31E1Q6ZUB1 1445 aa22.66■■□□□ 1.22
CHTF18-220ENST00000631357 ADGRL2O95490 1459 aa22.63■■□□□ 1.21
CHTF18-220ENST00000631357 ADCY10Q96PN6 1610 aa22.61■■□□□ 1.21
CHTF18-220ENST00000631357 NBPF1Q3BBV0 1214 aa22.61■■□□□ 1.21
CHTF18-220ENST00000631357 ADGBQ8N7X0 1667 aa22.6■■□□□ 1.21
CHTF18-220ENST00000631357 MBD5Q9P267 1494 aa22.6■■□□□ 1.21
CHTF18-220ENST00000631357 CHD1O14646 1710 aa22.59■■□□□ 1.21
CHTF18-220ENST00000631357 ARHGAP5Q13017 1502 aa22.58■■□□□ 1.2
CHTF18-220ENST00000631357 SALL2Q9Y467 1007 aaPredicted RBP22.57■■□□□ 1.2
CHTF18-220ENST00000631357 CROCC2H7BZ55 1655 aa22.57■■□□□ 1.2
CHTF18-220ENST00000631357 MYT1LQ9UL68 1186 aa22.57■■□□□ 1.2
CHTF18-220ENST00000631357 SYCP2Q9BX26 1530 aa22.56■■□□□ 1.2
CHTF18-220ENST00000631357 SAMD9LQ8IVG5 1584 aa22.55■■□□□ 1.2
CHTF18-220ENST00000631357 BCORL1Q5H9F3 1711 aa22.54■■□□□ 1.2
CHTF18-220ENST00000631357 AFAP1Q8N556 730 aa22.53■■□□□ 1.2
CHTF18-220ENST00000631357 CCDC141Q6ZP82 1450 aa22.52■■□□□ 1.2
CHTF18-220ENST00000631357 TTC37Q6PGP7 1564 aa22.52■■□□□ 1.2
CHTF18-220ENST00000631357 ROCK2O75116 1388 aaKnown RBP22.52■■□□□ 1.2
CHTF18-220ENST00000631357 PLEKHH2Q8IVE3 1493 aa22.51■■□□□ 1.19
CHTF18-220ENST00000631357 DHX29Q7Z478 1369 aaKnown RBP22.5■■□□□ 1.19
CHTF18-220ENST00000631357 CDC42BPBQ9Y5S2 1711 aa22.49■■□□□ 1.19
CHTF18-220ENST00000631357 TMC1Q8TDI8 760 aa22.47■■□□□ 1.19
CHTF18-220ENST00000631357 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.47■■□□□ 1.197e-7■■■□□ 16.5
CHTF18-220ENST00000631357 B4GALNT3Q6L9W6 998 aa22.47■■□□□ 1.19
CHTF18-220ENST00000631357 SHANK2Q9UPX8 1470 aa22.46■■□□□ 1.19
CHTF18-220ENST00000631357 CCDC144AA2RUR9 1427 aa22.46■■□□□ 1.19
CHTF18-220ENST00000631357 FAM135AQ9P2D6 1515 aa22.45■■□□□ 1.18
CHTF18-220ENST00000631357 ARHGEF12Q9NZN5 1544 aa22.44■■□□□ 1.18
CHTF18-220ENST00000631357 RBM19Q9Y4C8 960 aaKnown RBP22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms