RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 SCAPERQ9BY12 1400 aa33.71■■■□□ 2.99
TARDBP-228ENST00000629725 PLCH2O75038 1416 aa33.7■■■□□ 2.99
TARDBP-228ENST00000629725 MYO5CQ9NQX4 1742 aa33.62■■■□□ 2.97
TARDBP-228ENST00000629725 ATP10AO60312 1499 aa33.62■■■□□ 2.97
TARDBP-228ENST00000629725 ARHGEF12Q9NZN5 1544 aa33.59■■■□□ 2.97
TARDBP-228ENST00000629725 CERKQ8TCT0 537 aa33.59■■■□□ 2.97
TARDBP-228ENST00000629725 ATP1B4Q9UN42 357 aaPredicted RBP33.59■■■□□ 2.97
TARDBP-228ENST00000629725 C9orf84Q5VXU9 1444 aa33.59■■■□□ 2.97
TARDBP-228ENST00000629725 EFCAB2Q5VUJ9 269 aa33.58■■■□□ 2.97
TARDBP-228ENST00000629725 PREX1Q8TCU6 1659 aa33.55■■■□□ 2.96
TARDBP-228ENST00000629725 FMN1Q68DA7 1419 aa33.55■■■□□ 2.96
TARDBP-228ENST00000629725 CDK11AQ9UQ88 783 aaPredicted RBP33.54■■■□□ 2.96
TARDBP-228ENST00000629725 ZNF518AQ6AHZ1 1483 aa33.5■■■□□ 2.95
TARDBP-228ENST00000629725 KIF14Q15058 1648 aa33.5■■■□□ 2.95
TARDBP-228ENST00000629725 UBTFP17480 764 aaKnown RBP33.49■■■□□ 2.95
TARDBP-228ENST00000629725 CEBPAP49715 358 aaPredicted RBP33.47■■■□□ 2.95
TARDBP-228ENST00000629725 EHMT2Q96KQ7 1210 aa33.47■■■□□ 2.95
TARDBP-228ENST00000629725 ARHGAP35Q9NRY4 1499 aa33.45■■■□□ 2.95
TARDBP-228ENST00000629725 ARHGAP5Q13017 1502 aa33.45■■■□□ 2.95
TARDBP-228ENST00000629725 KDM5CP41229 1560 aa33.43■■■□□ 2.94
TARDBP-228ENST00000629725 AFAP1Q8N556 730 aa33.43■■■□□ 2.94
TARDBP-228ENST00000629725 TROQ12816 1431 aaPredicted RBP33.42■■■□□ 2.94
TARDBP-228ENST00000629725 MYT1LQ9UL68 1186 aa33.41■■■□□ 2.94
TARDBP-228ENST00000629725 SETD1BQ9UPS6 1966 aaKnown RBP33.4■■■□□ 2.94
TARDBP-228ENST00000629725 STRCQ7RTU9 1775 aa33.39■■■□□ 2.94
TARDBP-228ENST00000629725 CLIP1P30622 1438 aa33.39■■■□□ 2.94
TARDBP-228ENST00000629725 DMRT2Q9Y5R5 561 aa33.39■■■□□ 2.94
TARDBP-228ENST00000629725 UHRF1BP1Q6BDS2 1440 aa33.37■■■□□ 2.93
TARDBP-228ENST00000629725 DIP2CQ9Y2E4 1556 aa33.36■■■□□ 2.93
TARDBP-228ENST00000629725 LRRIQ1Q96JM4 1722 aa33.36■■■□□ 2.93
TARDBP-228ENST00000629725 REREQ9P2R6 1566 aa33.34■■■□□ 2.93
TARDBP-228ENST00000629725 CDC42BPBQ9Y5S2 1711 aa33.33■■■□□ 2.93
TARDBP-228ENST00000629725 ABCA6Q8N139 1617 aa33.3■■■□□ 2.92
TARDBP-228ENST00000629725 MLH3Q9UHC1 1453 aa33.29■■■□□ 2.92
TARDBP-228ENST00000629725 C3P01024 1663 aa33.29■■■□□ 2.92
TARDBP-228ENST00000629725 PREX2Q70Z35 1606 aa33.24■■■□□ 2.91
TARDBP-228ENST00000629725 ESF1Q9H501 851 aaKnown RBP33.24■■■□□ 2.91
TARDBP-228ENST00000629725 ABCC1P33527 1531 aa33.22■■■□□ 2.91
TARDBP-228ENST00000629725 AGLP35573 1532 aa33.22■■■□□ 2.91
TARDBP-228ENST00000629725 TRAPPC8Q9Y2L5 1435 aa33.2■■■□□ 2.91
TARDBP-228ENST00000629725 ITSN2Q9NZM3 1697 aa33.2■■■□□ 2.91
TARDBP-228ENST00000629725 PTPRTO14522 1441 aa33.19■■■□□ 2.9
TARDBP-228ENST00000629725 DISP3Q9P2K9 1392 aa33.17■■■□□ 2.9
TARDBP-228ENST00000629725 CCDC18Q5T9S5 1454 aa33.15■■■□□ 2.9
TARDBP-228ENST00000629725 KIDINS220Q9ULH0 1771 aa33.15■■■□□ 2.9
TARDBP-228ENST00000629725 CDC42BPAQ5VT25 1732 aa33.12■■■□□ 2.89
TARDBP-228ENST00000629725 CASKIN1Q8WXD9 1431 aa33.11■■■□□ 2.89
TARDBP-228ENST00000629725 CNTLNQ9NXG0 1405 aa33.11■■■□□ 2.89
TARDBP-228ENST00000629725 ILDR2Q71H61 639 aa33.07■■■□□ 2.88
TARDBP-228ENST00000629725 NCOA1Q15788 1441 aa33.04■■■□□ 2.88
TARDBP-228ENST00000629725 LTBP4Q8N2S1 1624 aa33.04■■■□□ 2.88
TARDBP-228ENST00000629725 SAMD9LQ8IVG5 1584 aa33.03■■■□□ 2.88
TARDBP-228ENST00000629725 MROH2AA6NES4 1674 aa33.02■■■□□ 2.88
TARDBP-228ENST00000629725 CHIC1Q5VXU3 224 aa33.02■■■□□ 2.88
TARDBP-228ENST00000629725 ZNF777Q9ULD5 760 aaPredicted RBP33■■■□□ 2.87
TARDBP-228ENST00000629725 IQSEC2Q5JU85 1478 aa32.99■■■□□ 2.87
TARDBP-228ENST00000629725 SOCS7O14512 581 aa32.98■■■□□ 2.87
TARDBP-228ENST00000629725 NPATQ14207 1427 aa32.98■■■□□ 2.87
TARDBP-228ENST00000629725 CAMSAP1Q5T5Y3 1602 aa32.97■■■□□ 2.87
TARDBP-228ENST00000629725 SUPT6HQ7KZ85 1726 aaKnown RBP32.97■■■□□ 2.87
TARDBP-228ENST00000629725 FYCO1Q9BQS8 1478 aa32.96■■■□□ 2.87
TARDBP-228ENST00000629725 SYCP2Q9BX26 1530 aa32.96■■■□□ 2.87
TARDBP-228ENST00000629725 SPATA31D1Q6ZQQ2 1576 aa32.96■■■□□ 2.87
TARDBP-228ENST00000629725 ZMYM3Q14202 1370 aa32.96■■■□□ 2.87
TARDBP-228ENST00000629725 SPAG9O60271 1321 aaKnown RBP32.95■■■□□ 2.86
TARDBP-228ENST00000629725 GPATCH8Q9UKJ3 1502 aaKnown RBP32.92■■■□□ 2.86
TARDBP-228ENST00000629725 HNRNPMP52272 730 aaKnown RBP eCLIP32.91■■■□□ 2.867e-7■■□□□ 12.4
TARDBP-228ENST00000629725 CLTCQ00610 1675 aaKnown RBP32.89■■■□□ 2.86
TARDBP-228ENST00000629725 ATP7AQ04656 1500 aa32.88■■■□□ 2.85
TARDBP-228ENST00000629725 NCKAP5LQ9HCH0 1330 aa32.85■■■□□ 2.85
TARDBP-228ENST00000629725 PLXNC1O60486 1568 aa32.84■■■□□ 2.85
TARDBP-228ENST00000629725 KIAA1107Q9UPP5 1409 aa32.84■■■□□ 2.85
TARDBP-228ENST00000629725 INO80Q9ULG1 1556 aaPredicted RBP32.83■■■□□ 2.85
TARDBP-228ENST00000629725 ZNF142P52746 1687 aaPredicted RBP32.83■■■□□ 2.85
TARDBP-228ENST00000629725 PLEKHH2Q8IVE3 1493 aa32.83■■■□□ 2.85
TARDBP-228ENST00000629725 MYO3AQ8NEV4 1616 aa32.83■■■□□ 2.85
TARDBP-228ENST00000629725 A2MP01023 1474 aa32.82■■■□□ 2.84
TARDBP-228ENST00000629725 CFDP1Q9UEE9 299 aaPredicted RBP32.82■■■□□ 2.84
TARDBP-228ENST00000629725 ZNF335Q9H4Z2 1342 aaPredicted RBP32.79■■■□□ 2.84
TARDBP-228ENST00000629725 PLA2R1Q13018 1463 aa32.79■■■□□ 2.84
TARDBP-228ENST00000629725 PKD2Q13563 968 aa32.78■■■□□ 2.84
TARDBP-228ENST00000629725 GGT6Q6P531 493 aa32.78■■■□□ 2.84
TARDBP-228ENST00000629725 CEP170BQ9Y4F5 1589 aaPredicted RBP32.78■■■□□ 2.84
TARDBP-228ENST00000629725 CCNB3Q8WWL7 1395 aa32.77■■■□□ 2.84
TARDBP-228ENST00000629725 PTPRKQ15262 1439 aa32.77■■■□□ 2.84
TARDBP-228ENST00000629725 ADGBQ8N7X0 1667 aa32.74■■■□□ 2.83
TARDBP-228ENST00000629725 UBAP1LF5GYI3 381 aa32.73■■■□□ 2.83
TARDBP-228ENST00000629725 TCOF1Q13428 1488 aaKnown RBP32.73■■■□□ 2.83
TARDBP-228ENST00000629725 PPP6R1Q9UPN7 881 aa32.71■■■□□ 2.83
TARDBP-228ENST00000629725 MTUS2Q5JR59 1369 aa32.69■■■□□ 2.82
TARDBP-228ENST00000629725 ZNF644Q9H582 1327 aaPredicted RBP32.62■■■□□ 2.81
TARDBP-228ENST00000629725 DNMT1P26358 1616 aaKnown RBP32.61■■■□□ 2.81
TARDBP-228ENST00000629725 TIAM1Q13009 1591 aa32.61■■■□□ 2.81
TARDBP-228ENST00000629725 A2ML1A8K2U0 1454 aa32.61■■■□□ 2.81
TARDBP-228ENST00000629725 MBD5Q9P267 1494 aa32.59■■■□□ 2.81
TARDBP-228ENST00000629725 RTEL1-TNFRSF6BF6WH68 1400 aa32.58■■■□□ 2.81
TARDBP-228ENST00000629725 DHX29Q7Z478 1369 aaKnown RBP32.55■■■□□ 2.8
TARDBP-228ENST00000629725 POLR1AO95602 1720 aaPredicted RBP32.54■■■□□ 2.8
TARDBP-228ENST00000629725 EHBP1L1Q8N3D4 1523 aa32.54■■■□□ 2.8
TARDBP-228ENST00000629725 TNRQ92752 1358 aa32.48■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms