RNA–Protein interactions for RNA: ENST00000628368.1

CPS1-IT1-201, CPS1 intronic transcript 1, humanhuman

BASIC

Gene CPS1-IT1, Length 2,306 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-IT1-201ENST00000628368 CFDP1Q9UEE9 299 aaPredicted RBP8.68□□□□□ -1.02
CPS1-IT1-201ENST00000628368 ZNF644Q9H582 1327 aaPredicted RBP8.68□□□□□ -1.02
CPS1-IT1-201ENST00000628368 CDC42BPAQ5VT25 1732 aa8.67□□□□□ -1.02
CPS1-IT1-201ENST00000628368 DHX57Q6P158 1386 aaKnown RBP8.66□□□□□ -1.02
CPS1-IT1-201ENST00000628368 CAMSAP2Q08AD1 1489 aa8.66□□□□□ -1.02
CPS1-IT1-201ENST00000628368 HFM1A2PYH4 1435 aa8.66□□□□□ -1.02
CPS1-IT1-201ENST00000628368 SLC4A1APQ9BWU0 796 aaKnown RBP8.65□□□□□ -1.02
CPS1-IT1-201ENST00000628368 DNMT1P26358 1616 aaKnown RBP8.65□□□□□ -1.02
CPS1-IT1-201ENST00000628368 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.65□□□□□ -1.03
CPS1-IT1-201ENST00000628368 ABCC5O15440 1437 aa8.65□□□□□ -1.03
CPS1-IT1-201ENST00000628368 DAPK1P53355 1430 aa8.65□□□□□ -1.03
CPS1-IT1-201ENST00000628368 NAIPQ13075 1403 aa8.65□□□□□ -1.03
CPS1-IT1-201ENST00000628368 ZNF777Q9ULD5 760 aaPredicted RBP8.64□□□□□ -1.03
CPS1-IT1-201ENST00000628368 TTC37Q6PGP7 1564 aa8.64□□□□□ -1.03
CPS1-IT1-201ENST00000628368 KCNH8Q96L42 1107 aa8.64□□□□□ -1.03
CPS1-IT1-201ENST00000628368 CHIC2Q9UKJ5 165 aa8.64□□□□□ -1.03
CPS1-IT1-201ENST00000628368 CDC42BPBQ9Y5S2 1711 aa8.63□□□□□ -1.03
CPS1-IT1-201ENST00000628368 CLSPNQ9HAW4 1339 aa8.63□□□□□ -1.03
CPS1-IT1-201ENST00000628368 PREX2Q70Z35 1606 aa8.63□□□□□ -1.03
CPS1-IT1-201ENST00000628368 AKNAQ7Z591 1439 aa8.63□□□□□ -1.03
CPS1-IT1-201ENST00000628368 RRP7BPQ9NSQ0 103 aa8.62□□□□□ -1.03
CPS1-IT1-201ENST00000628368 ROCK1Q13464 1354 aa8.61□□□□□ -1.03
CPS1-IT1-201ENST00000628368 WDR7Q9Y4E6 1490 aa8.61□□□□□ -1.03
CPS1-IT1-201ENST00000628368 GCC2Q8IWJ2 1684 aa8.61□□□□□ -1.03
CPS1-IT1-201ENST00000628368 MYO5CQ9NQX4 1742 aa8.61□□□□□ -1.03
CPS1-IT1-201ENST00000628368 SAMD9LQ8IVG5 1584 aa8.6□□□□□ -1.03
CPS1-IT1-201ENST00000628368 ASXL2Q76L83 1435 aa8.6□□□□□ -1.03
CPS1-IT1-201ENST00000628368 CROCC2H7BZ55 1655 aa8.59□□□□□ -1.03
CPS1-IT1-201ENST00000628368 NPM1P06748 294 aaKnown RBP eCLIP8.59□□□□□ -1.03
CPS1-IT1-201ENST00000628368 ARHGAP5Q13017 1502 aa8.59□□□□□ -1.03
CPS1-IT1-201ENST00000628368 PLCH2O75038 1416 aa8.59□□□□□ -1.03
CPS1-IT1-201ENST00000628368 MBD5Q9P267 1494 aa8.59□□□□□ -1.03
CPS1-IT1-201ENST00000628368 HNRNPMP52272 730 aaKnown RBP eCLIP8.59□□□□□ -1.03
CPS1-IT1-201ENST00000628368 MAPKBP1O60336 1514 aa8.59□□□□□ -1.03
CPS1-IT1-201ENST00000628368 ARHGEF5Q12774 1597 aa8.59□□□□□ -1.04
CPS1-IT1-201ENST00000628368 NCOA1Q15788 1441 aa8.58□□□□□ -1.04
CPS1-IT1-201ENST00000628368 ADGRL2O95490 1459 aa8.58□□□□□ -1.04
CPS1-IT1-201ENST00000628368 RIMBP3CA6NJZ7 1639 aa8.58□□□□□ -1.04
CPS1-IT1-201ENST00000628368 RIMBP3BA6NNM3 1639 aa8.58□□□□□ -1.04
CPS1-IT1-201ENST00000628368 KDM6BO15054 1643 aa8.58□□□□□ -1.04
CPS1-IT1-201ENST00000628368 RIMBP3Q9UFD9 1639 aa8.58□□□□□ -1.04
CPS1-IT1-201ENST00000628368 ADGBQ8N7X0 1667 aa8.58□□□□□ -1.04
CPS1-IT1-201ENST00000628368 MAPK8IP2Q13387 824 aaPredicted RBP8.57□□□□□ -1.04
CPS1-IT1-201ENST00000628368 SHANK2Q9UPX8 1470 aa8.57□□□□□ -1.04
CPS1-IT1-201ENST00000628368 KIAA1107Q9UPP5 1409 aa8.57□□□□□ -1.04
CPS1-IT1-201ENST00000628368 ABCA9Q8IUA7 1624 aa8.57□□□□□ -1.04
CPS1-IT1-201ENST00000628368 RSPH4AQ5TD94 716 aa8.57□□□□□ -1.04
CPS1-IT1-201ENST00000628368 EFCAB2Q5VUJ9 269 aa8.57□□□□□ -1.04
CPS1-IT1-201ENST00000628368 CYB5RLQ6IPT4 315 aa8.57□□□□□ -1.04
CPS1-IT1-201ENST00000628368 ARAP3Q8WWN8 1544 aa8.56□□□□□ -1.04
CPS1-IT1-201ENST00000628368 ANKRD30AQ9BXX3 1397 aa8.56□□□□□ -1.04
CPS1-IT1-201ENST00000628368 C9orf84Q5VXU9 1444 aa8.56□□□□□ -1.04
CPS1-IT1-201ENST00000628368 CCDC141Q6ZP82 1450 aa8.56□□□□□ -1.04
CPS1-IT1-201ENST00000628368 PLEKHH2Q8IVE3 1493 aa8.56□□□□□ -1.04
CPS1-IT1-201ENST00000628368 SYCP2Q9BX26 1530 aa8.56□□□□□ -1.04
CPS1-IT1-201ENST00000628368 TSPY4P0CV99 314 aa8.55□□□□□ -1.04
CPS1-IT1-201ENST00000628368 TSPY10P0CW01 314 aa8.55□□□□□ -1.04
CPS1-IT1-201ENST00000628368 ARHGEF12Q9NZN5 1544 aa8.55□□□□□ -1.04
CPS1-IT1-201ENST00000628368 ACIN1Q9UKV3 1341 aaKnown RBP8.54□□□□□ -1.04
CPS1-IT1-201ENST00000628368 ABCC1P33527 1531 aa8.53□□□□□ -1.04
CPS1-IT1-201ENST00000628368 TRIM52Q96A61 297 aa8.53□□□□□ -1.04
CPS1-IT1-201ENST00000628368 MAST1Q9Y2H9 1570 aa8.52□□□□□ -1.04
CPS1-IT1-201ENST00000628368 DENND4BO75064 1496 aaPredicted RBP8.52□□□□□ -1.05
CPS1-IT1-201ENST00000628368 ANKRD50Q9ULJ7 1429 aa8.52□□□□□ -1.05
CPS1-IT1-201ENST00000628368 SIN3AQ96ST3 1273 aa8.52□□□□□ -1.05
CPS1-IT1-201ENST00000628368 FANCAO15360 1455 aa8.51□□□□□ -1.05
CPS1-IT1-201ENST00000628368 PPP4R3CPQ6ZMV5 832 aa8.51□□□□□ -1.05
CPS1-IT1-201ENST00000628368 MPHOSPH9Q99550 1183 aa8.51□□□□□ -1.05
CPS1-IT1-201ENST00000628368 TRAPPC8Q9Y2L5 1435 aa8.51□□□□□ -1.05
CPS1-IT1-201ENST00000628368 KIF15Q9NS87 1388 aa8.51□□□□□ -1.05
CPS1-IT1-201ENST00000628368 CD109Q6YHK3 1445 aa8.5□□□□□ -1.05
CPS1-IT1-201ENST00000628368 NEUROD1Q13562 356 aa8.49□□□□□ -1.05
CPS1-IT1-201ENST00000628368 PLXNC1O60486 1568 aa8.48□□□□□ -1.05
CPS1-IT1-201ENST00000628368 AFAP1Q8N556 730 aa8.48□□□□□ -1.05
CPS1-IT1-201ENST00000628368 ADGRL1O94910 1474 aa8.48□□□□□ -1.05
CPS1-IT1-201ENST00000628368 PZPP20742 1482 aa8.48□□□□□ -1.05
CPS1-IT1-201ENST00000628368 TIMELESSQ9UNS1 1208 aa8.48□□□□□ -1.05
CPS1-IT1-201ENST00000628368 SCAPERQ9BY12 1400 aa8.47□□□□□ -1.05
CPS1-IT1-201ENST00000628368 RTEL1-TNFRSF6BF6WH68 1400 aa8.47□□□□□ -1.05
CPS1-IT1-201ENST00000628368 SPAG9O60271 1321 aaKnown RBP8.46□□□□□ -1.05
CPS1-IT1-201ENST00000628368 GLI2P10070 1586 aa8.46□□□□□ -1.05
CPS1-IT1-201ENST00000628368 DUOX2Q9NRD8 1548 aa8.46□□□□□ -1.06
CPS1-IT1-201ENST00000628368 CFAP74Q9C0B2 1584 aa8.46□□□□□ -1.06
CPS1-IT1-201ENST00000628368 ZFYVE16Q7Z3T8 1539 aa8.45□□□□□ -1.06
CPS1-IT1-201ENST00000628368 NUP155O75694 1391 aa8.45□□□□□ -1.06
CPS1-IT1-201ENST00000628368 MAP3K4Q9Y6R4 1608 aa8.45□□□□□ -1.06
CPS1-IT1-201ENST00000628368 KDM5DQ9BY66 1539 aa8.45□□□□□ -1.06
CPS1-IT1-201ENST00000628368 ANKRD30BQ9BXX2 1392 aa8.45□□□□□ -1.06
CPS1-IT1-201ENST00000628368 ERBINQ96RT1 1412 aa8.44□□□□□ -1.06
CPS1-IT1-201ENST00000628368 INO80Q9ULG1 1556 aaPredicted RBP8.44□□□□□ -1.06
CPS1-IT1-201ENST00000628368 NEO1Q92859 1461 aa8.44□□□□□ -1.06
CPS1-IT1-201ENST00000628368 ATP7AQ04656 1500 aa8.43□□□□□ -1.06
CPS1-IT1-201ENST00000628368 UNC13BO14795 1591 aa8.43□□□□□ -1.06
CPS1-IT1-201ENST00000628368 DIP2BQ9P265 1576 aa8.43□□□□□ -1.06
CPS1-IT1-201ENST00000628368 ZNF316A6NFI3 1004 aaPredicted RBP8.43□□□□□ -1.06
CPS1-IT1-201ENST00000628368 PKD2Q13563 968 aa8.43□□□□□ -1.06
CPS1-IT1-201ENST00000628368 ZNF518AQ6AHZ1 1483 aa8.43□□□□□ -1.06
CPS1-IT1-201ENST00000628368 PPP1R15AO75807 674 aaPredicted RBP8.42□□□□□ -1.06
CPS1-IT1-201ENST00000628368 FAM69CQ0P6D2 419 aa8.42□□□□□ -1.06
CPS1-IT1-201ENST00000628368 TONSLQ96HA7 1378 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms