RNA–Protein interactions for RNA: ENST00000628267.2

UBE3A-215, Transcript of ubiquitin protein ligase E3A, human

TSL 5

Gene UBE3A, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3A-215	ENST00000628267	CDK11A	Q9UQ88	783 aa	Predicted RBP	33.31	■■■□□ 2.92
UBE3A-215	ENST00000628267	EFCAB2	Q5VUJ9	269 aa		33.27	■■■□□ 2.92
UBE3A-215	ENST00000628267	SIGLEC1	Q9BZZ2	1709 aa		33.27	■■■□□ 2.92
UBE3A-215	ENST00000628267	EHMT2	Q96KQ7	1210 aa		33.26	■■■□□ 2.91
UBE3A-215	ENST00000628267	ARHGAP35	Q9NRY4	1499 aa		33.25	■■■□□ 2.91
UBE3A-215	ENST00000628267	MYO5C	Q9NQX4	1742 aa		33.24	■■■□□ 2.91
UBE3A-215	ENST00000628267	MLEC	Q14165	292 aa		33.22	■■■□□ 2.91
UBE3A-215	ENST00000628267	PLPPR3	Q6T4P5	718 aa		33.22	■■■□□ 2.91
UBE3A-215	ENST00000628267	ATP10A	O60312	1499 aa		33.2	■■■□□ 2.91
UBE3A-215	ENST00000628267	HSPA2	P54652	639 aa		33.18	■■■□□ 2.9
UBE3A-215	ENST00000628267	FER1L4	A9Z1Z3	1794 aa		33.18	■■■□□ 2.9
UBE3A-215	ENST00000628267	KIF14	Q15058	1648 aa		33.16	■■■□□ 2.9
UBE3A-215	ENST00000628267	TRO	Q12816	1431 aa	Predicted RBP	33.15	■■■□□ 2.9
UBE3A-215	ENST00000628267	C9orf84	Q5VXU9	1444 aa		33.15	■■■□□ 2.9
UBE3A-215	ENST00000628267	CLIP1	P30622	1438 aa		33.12	■■■□□ 2.89
UBE3A-215	ENST00000628267	ARHGEF12	Q9NZN5	1544 aa		33.12	■■■□□ 2.89
UBE3A-215	ENST00000628267	ZNF518A	Q6AHZ1	1483 aa		33.12	■■■□□ 2.89
UBE3A-215	ENST00000628267	CHIC1	Q5VXU3	224 aa		33.1	■■■□□ 2.89
UBE3A-215	ENST00000628267	ARHGAP5	Q13017	1502 aa		33.09	■■■□□ 2.89
UBE3A-215	ENST00000628267	AFAP1	Q8N556	730 aa		33.05	■■■□□ 2.88
UBE3A-215	ENST00000628267	KDM5C	P41229	1560 aa		33.04	■■■□□ 2.88
UBE3A-215	ENST00000628267	LRRIQ1	Q96JM4	1722 aa		33.03	■■■□□ 2.88
UBE3A-215	ENST00000628267	MYT1L	Q9UL68	1186 aa		33.01	■■■□□ 2.87
UBE3A-215	ENST00000628267	PREX1	Q8TCU6	1659 aa		32.98	■■■□□ 2.87
UBE3A-215	ENST00000628267	CDC42BPB	Q9Y5S2	1711 aa		32.97	■■■□□ 2.87
UBE3A-215	ENST00000628267	CEBPA	P49715	358 aa	Predicted RBP	32.96	■■■□□ 2.87
UBE3A-215	ENST00000628267	CCDC18	Q5T9S5	1454 aa		32.94	■■■□□ 2.86
UBE3A-215	ENST00000628267	MLH3	Q9UHC1	1453 aa		32.93	■■■□□ 2.86
UBE3A-215	ENST00000628267	RERE	Q9P2R6	1566 aa		32.93	■■■□□ 2.86
UBE3A-215	ENST00000628267	DIP2C	Q9Y2E4	1556 aa		32.93	■■■□□ 2.86
UBE3A-215	ENST00000628267	CERK	Q8TCT0	537 aa		32.93	■■■□□ 2.86
UBE3A-215	ENST00000628267	CASKIN1	Q8WXD9	1431 aa		32.93	■■■□□ 2.86
UBE3A-215	ENST00000628267	PREX2	Q70Z35	1606 aa		32.91	■■■□□ 2.86
UBE3A-215	ENST00000628267	SETD1B	Q9UPS6	1966 aa	Known RBP	32.87	■■■□□ 2.85
UBE3A-215	ENST00000628267	ABCC1	P33527	1531 aa		32.87	■■■□□ 2.85
UBE3A-215	ENST00000628267	DMRT2	Q9Y5R5	561 aa		32.86	■■■□□ 2.85
UBE3A-215	ENST00000628267	ABCA6	Q8N139	1617 aa		32.86	■■■□□ 2.85
UBE3A-215	ENST00000628267	UHRF1BP1	Q6BDS2	1440 aa		32.85	■■■□□ 2.85
UBE3A-215	ENST00000628267	TRAPPC8	Q9Y2L5	1435 aa		32.85	■■■□□ 2.85
UBE3A-215	ENST00000628267	AGL	P35573	1532 aa		32.83	■■■□□ 2.85
UBE3A-215	ENST00000628267	ITSN2	Q9NZM3	1697 aa		32.82	■■■□□ 2.84
UBE3A-215	ENST00000628267	ESF1	Q9H501	851 aa	Known RBP	32.82	■■■□□ 2.84
UBE3A-215	ENST00000628267	CDC42BPA	Q5VT25	1732 aa		32.78	■■■□□ 2.84
UBE3A-215	ENST00000628267	FYCO1	Q9BQS8	1478 aa		32.78	■■■□□ 2.84
UBE3A-215	ENST00000628267	STRC	Q7RTU9	1775 aa		32.78	■■■□□ 2.84
UBE3A-215	ENST00000628267	C3	P01024	1663 aa		32.76	■■■□□ 2.84
UBE3A-215	ENST00000628267	KIDINS220	Q9ULH0	1771 aa		32.75	■■■□□ 2.83
UBE3A-215	ENST00000628267	CNTLN	Q9NXG0	1405 aa		32.7	■■■□□ 2.83
UBE3A-215	ENST00000628267	ZNF777	Q9ULD5	760 aa	Predicted RBP	32.7	■■■□□ 2.83
UBE3A-215	ENST00000628267	SAMD9L	Q8IVG5	1584 aa		32.67	■■■□□ 2.82
UBE3A-215	ENST00000628267	GPATCH8	Q9UKJ3	1502 aa	Known RBP	32.66	■■■□□ 2.82
UBE3A-215	ENST00000628267	PTPRT	O14522	1441 aa		32.65	■■■□□ 2.82
UBE3A-215	ENST00000628267	SPAG9	O60271	1321 aa	Known RBP	32.63	■■■□□ 2.81
UBE3A-215	ENST00000628267	SYCP2	Q9BX26	1530 aa		32.61	■■■□□ 2.81
UBE3A-215	ENST00000628267	HNRNPM	P52272	730 aa	Known RBP eCLIP	32.61	■■■□□ 2.81
UBE3A-215	ENST00000628267	KIAA1107	Q9UPP5	1409 aa		32.59	■■■□□ 2.81
UBE3A-215	ENST00000628267	CFDP1	Q9UEE9	299 aa	Predicted RBP	32.58	■■■□□ 2.81
UBE3A-215	ENST00000628267	PLEKHH2	Q8IVE3	1493 aa		32.58	■■■□□ 2.81
UBE3A-215	ENST00000628267	MROH2A	A6NES4	1674 aa		32.57	■■■□□ 2.8
UBE3A-215	ENST00000628267	NPAT	Q14207	1427 aa		32.56	■■■□□ 2.8
UBE3A-215	ENST00000628267	CCNB3	Q8WWL7	1395 aa		32.55	■■■□□ 2.8
UBE3A-215	ENST00000628267	ATP7A	Q04656	1500 aa		32.54	■■■□□ 2.8
UBE3A-215	ENST00000628267	ZMYM3	Q14202	1370 aa		32.54	■■■□□ 2.8
UBE3A-215	ENST00000628267	SUPT6H	Q7KZ85	1726 aa	Known RBP	32.53	■■■□□ 2.8
UBE3A-215	ENST00000628267	NCOA1	Q15788	1441 aa		32.51	■■■□□ 2.8
UBE3A-215	ENST00000628267	MTUS2	Q5JR59	1369 aa		32.5	■■■□□ 2.79
UBE3A-215	ENST00000628267	INO80	Q9ULG1	1556 aa	Predicted RBP	32.49	■■■□□ 2.79
UBE3A-215	ENST00000628267	A2M	P01023	1474 aa		32.48	■■■□□ 2.79
UBE3A-215	ENST00000628267	PLXNC1	O60486	1568 aa		32.47	■■■□□ 2.79
UBE3A-215	ENST00000628267	CAMSAP1	Q5T5Y3	1602 aa		32.44	■■■□□ 2.78
UBE3A-215	ENST00000628267	LTBP4	Q8N2S1	1624 aa		32.44	■■■□□ 2.78
UBE3A-215	ENST00000628267	CLTC	Q00610	1675 aa	Known RBP	32.43	■■■□□ 2.78
UBE3A-215	ENST00000628267	GGT6	Q6P531	493 aa		32.41	■■■□□ 2.78
UBE3A-215	ENST00000628267	PPP6R1	Q9UPN7	881 aa		32.41	■■■□□ 2.78
UBE3A-215	ENST00000628267	IQSEC2	Q5JU85	1478 aa		32.41	■■■□□ 2.78
UBE3A-215	ENST00000628267	ADGB	Q8N7X0	1667 aa		32.38	■■■□□ 2.77
UBE3A-215	ENST00000628267	PTPRK	Q15262	1439 aa		32.35	■■■□□ 2.77
UBE3A-215	ENST00000628267	DISP3	Q9P2K9	1392 aa		32.35	■■■□□ 2.77
UBE3A-215	ENST00000628267	ZNF644	Q9H582	1327 aa	Predicted RBP	32.35	■■■□□ 2.77
UBE3A-215	ENST00000628267	TIAM1	Q13009	1591 aa		32.35	■■■□□ 2.77
UBE3A-215	ENST00000628267	EHBP1L1	Q8N3D4	1523 aa		32.34	■■■□□ 2.77
UBE3A-215	ENST00000628267	ZNF142	P52746	1687 aa	Predicted RBP	32.34	■■■□□ 2.77
UBE3A-215	ENST00000628267	MYO3A	Q8NEV4	1616 aa		32.33	■■■□□ 2.77
UBE3A-215	ENST00000628267	NCKAP5L	Q9HCH0	1330 aa		32.33	■■■□□ 2.77
UBE3A-215	ENST00000628267	MBD5	Q9P267	1494 aa		32.33	■■■□□ 2.77
UBE3A-215	ENST00000628267	PLA2R1	Q13018	1463 aa		32.32	■■■□□ 2.76
UBE3A-215	ENST00000628267	PKD2	Q13563	968 aa		32.32	■■■□□ 2.76
UBE3A-215	ENST00000628267	RTEL1-TNFRSF6B	F6WH68	1400 aa		32.32	■■■□□ 2.76
UBE3A-215	ENST00000628267	CEP162	Q5TB80	1403 aa		32.3	■■■□□ 2.76
UBE3A-215	ENST00000628267	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	32.3	■■■□□ 2.76
UBE3A-215	ENST00000628267	DHX29	Q7Z478	1369 aa	Known RBP	32.25	■■■□□ 2.75
UBE3A-215	ENST00000628267	TCOF1	Q13428	1488 aa	Known RBP	32.24	■■■□□ 2.75
UBE3A-215	ENST00000628267	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	32.24	■■■□□ 2.75
UBE3A-215	ENST00000628267	RSPH4A	Q5TD94	716 aa		32.21	■■■□□ 2.75
UBE3A-215	ENST00000628267	ILDR2	Q71H61	639 aa		32.2	■■■□□ 2.75
UBE3A-215	ENST00000628267	A2ML1	A8K2U0	1454 aa		32.18	■■■□□ 2.74
UBE3A-215	ENST00000628267	CCDC141	Q6ZP82	1450 aa		32.16	■■■□□ 2.74
UBE3A-215	ENST00000628267	KIF3B	O15066	747 aa		32.16	■■■□□ 2.74
UBE3A-215	ENST00000628267	NCOA2	Q15596	1464 aa		32.14	■■■□□ 2.74
UBE3A-215	ENST00000628267	SPATA31D1	Q6ZQQ2	1576 aa		32.14	■■■□□ 2.74

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