RNA–Protein interactions for RNA: ENST00000627212.2

RAPGEF6-215, Transcript of Rap guanine nucleotide exchange factor 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF6, Length 4,694 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF6-215ENST00000627212 CUX2O14529 1486 aa12.77□□□□□ -0.37
RAPGEF6-215ENST00000627212 IPO9Q96P70 1041 aaKnown RBP12.75□□□□□ -0.37
RAPGEF6-215ENST00000627212 SRPK2P78362 688 aaKnown RBP12.75□□□□□ -0.37
RAPGEF6-215ENST00000627212 NAP1L2Q9ULW6 460 aaPredicted RBP12.75□□□□□ -0.37
RAPGEF6-215ENST00000627212 KCNJ4P48050 445 aa12.75□□□□□ -0.37
RAPGEF6-215ENST00000627212 STK26Q9P289 416 aa12.75□□□□□ -0.37
RAPGEF6-215ENST00000627212 OS9Q13438 667 aaPredicted RBP12.74□□□□□ -0.37
RAPGEF6-215ENST00000627212 FHAD1B1AJZ9 1412 aa12.74□□□□□ -0.37
RAPGEF6-215ENST00000627212 CCDC146Q8IYE0 955 aa12.74□□□□□ -0.37
RAPGEF6-215ENST00000627212 FGD1P98174 961 aa12.74□□□□□ -0.37
RAPGEF6-215ENST00000627212 PLIN1O60240 522 aa12.73□□□□□ -0.37
RAPGEF6-215ENST00000627212 TULP1O00294 542 aaPredicted RBP12.73□□□□□ -0.37
RAPGEF6-215ENST00000627212 TCERG1O14776 1098 aaKnown RBP12.73□□□□□ -0.37
RAPGEF6-215ENST00000627212 U2AF1L5P0DN76 240 aaPredicted RBP12.73□□□□□ -0.37
RAPGEF6-215ENST00000627212 U2AF1Q01081 240 aaKnown RBP eCLIP12.73□□□□□ -0.37
RAPGEF6-215ENST00000627212 AMER1Q5JTC6 1135 aaPredicted RBP12.72□□□□□ -0.37
RAPGEF6-215ENST00000627212 KTN1Q86UP2 1357 aaKnown RBP12.72□□□□□ -0.37
RAPGEF6-215ENST00000627212 FOXD4L1Q9NU39 408 aa12.71□□□□□ -0.37
RAPGEF6-215ENST00000627212 MFAP1P55081 439 aaKnown RBP12.71□□□□□ -0.38
RAPGEF6-215ENST00000627212 MLECQ14165 292 aa12.7□□□□□ -0.38
RAPGEF6-215ENST00000627212 GGT6Q6P531 493 aa12.7□□□□□ -0.38
RAPGEF6-215ENST00000627212 MSNP26038 577 aaKnown RBP12.7□□□□□ -0.38
RAPGEF6-215ENST00000627212 ITPRIPQ8IWB1 547 aa12.7□□□□□ -0.38
RAPGEF6-215ENST00000627212 MS4A1P11836 297 aa12.69□□□□□ -0.38
RAPGEF6-215ENST00000627212 L1TD1Q5T7N2 865 aaKnown RBP12.69□□□□□ -0.38
RAPGEF6-215ENST00000627212 MROH2BQ7Z745 1585 aa12.69□□□□□ -0.38
RAPGEF6-215ENST00000627212 CDK11BP21127 795 aaKnown RBP12.68□□□□□ -0.38
RAPGEF6-215ENST00000627212 EIF4G1Q04637 1599 aaKnown RBP12.68□□□□□ -0.38
RAPGEF6-215ENST00000627212 ARHGAP35Q9NRY4 1499 aa12.68□□□□□ -0.38
RAPGEF6-215ENST00000627212 NUP155O75694 1391 aa12.68□□□□□ -0.38
RAPGEF6-215ENST00000627212 DHX57Q6P158 1386 aaKnown RBP12.68□□□□□ -0.38
RAPGEF6-215ENST00000627212 PNNQ9H307 717 aaKnown RBP12.67□□□□□ -0.38
RAPGEF6-215ENST00000627212 GOLGA6L4A6NEF3 574 aa12.67□□□□□ -0.38
RAPGEF6-215ENST00000627212 HAP1P54257 671 aaPredicted RBP12.67□□□□□ -0.38
RAPGEF6-215ENST00000627212 EXOC6Q8TAG9 804 aa12.67□□□□□ -0.38
RAPGEF6-215ENST00000627212 BCL2L13Q9BXK5 485 aa12.67□□□□□ -0.38
RAPGEF6-215ENST00000627212 ROCK2O75116 1388 aaKnown RBP12.67□□□□□ -0.38
RAPGEF6-215ENST00000627212 RRP7AQ9Y3A4 280 aaKnown RBP12.66□□□□□ -0.38
RAPGEF6-215ENST00000627212 ST20-MTHFSA0A0A6YYL1 179 aa12.65□□□□□ -0.38
RAPGEF6-215ENST00000627212 RALBP1Q15311 655 aa12.65□□□□□ -0.38
RAPGEF6-215ENST00000627212 BAZ1AQ9NRL2 1556 aaPredicted RBP12.65□□□□□ -0.38
RAPGEF6-215ENST00000627212 TDRD9Q8NDG6 1382 aaKnown RBP12.64□□□□□ -0.39
RAPGEF6-215ENST00000627212 GOLGA2Q08379 1002 aa12.64□□□□□ -0.39
RAPGEF6-215ENST00000627212 NUTM2DQ5VT03 806 aaPredicted RBP12.64□□□□□ -0.39
RAPGEF6-215ENST00000627212 PRKRIP1Q9H875 184 aaPredicted RBP12.64□□□□□ -0.39
RAPGEF6-215ENST00000627212 PDE4AP27815 886 aa12.64□□□□□ -0.39
RAPGEF6-215ENST00000627212 NOL8Q76FK4 1167 aaKnown RBP12.64□□□□□ -0.39
RAPGEF6-215ENST00000627212 NLRP13Q86W25 1043 aa12.64□□□□□ -0.39
RAPGEF6-215ENST00000627212 CHMP4BQ9H444 224 aaKnown RBP12.63□□□□□ -0.39
RAPGEF6-215ENST00000627212 RWDD1Q9H446 243 aaPredicted RBP12.63□□□□□ -0.39
RAPGEF6-215ENST00000627212 RUSC2Q8N2Y8 1516 aa12.63□□□□□ -0.39
RAPGEF6-215ENST00000627212 SMC4Q9NTJ3 1288 aa12.62□□□□□ -0.39
RAPGEF6-215ENST00000627212 DRC7Q8IY82 874 aa12.62□□□□□ -0.39
RAPGEF6-215ENST00000627212 FOXD4L5Q5VV16 416 aaPredicted RBP12.61□□□□□ -0.39
RAPGEF6-215ENST00000627212 FOXD4L4Q8WXT5 416 aaPredicted RBP12.61□□□□□ -0.39
RAPGEF6-215ENST00000627212 HNRNPMP52272 730 aaKnown RBP eCLIP12.61□□□□□ -0.392e-6■■■■□ 22.8
RAPGEF6-215ENST00000627212 GOLGA6L3A6NEY3 463 aa12.6□□□□□ -0.39
RAPGEF6-215ENST00000627212 ELL2O00472 640 aaPredicted RBP12.6□□□□□ -0.39
RAPGEF6-215ENST00000627212 GBP4Q96PP9 640 aa12.6□□□□□ -0.39
RAPGEF6-215ENST00000627212 FHOD3Q2V2M9 1422 aa12.59□□□□□ -0.39
RAPGEF6-215ENST00000627212 IPO8O15397 1037 aaKnown RBP12.59□□□□□ -0.39
RAPGEF6-215ENST00000627212 RAPGEF2Q9Y4G8 1499 aa12.59□□□□□ -0.39
RAPGEF6-215ENST00000627212 CRBNQ96SW2 442 aa12.58□□□□□ -0.4
RAPGEF6-215ENST00000627212 FMN1Q68DA7 1419 aa12.58□□□□□ -0.4
RAPGEF6-215ENST00000627212 CHAF1AQ13111 956 aaPredicted RBP12.57□□□□□ -0.4
RAPGEF6-215ENST00000627212 PANK3Q9H999 370 aa12.57□□□□□ -0.4
RAPGEF6-215ENST00000627212 MCCP23508 829 aa12.57□□□□□ -0.4
RAPGEF6-215ENST00000627212 FOXD4L6Q3SYB3 417 aaPredicted RBP12.57□□□□□ -0.4
RAPGEF6-215ENST00000627212 FOXD4L3Q6VB84 417 aaPredicted RBP12.57□□□□□ -0.4
RAPGEF6-215ENST00000627212 CENPJQ9HC77 1338 aaPredicted RBP12.57□□□□□ -0.4
RAPGEF6-215ENST00000627212 RTF1Q92541 710 aaKnown RBP12.56□□□□□ -0.4
RAPGEF6-215ENST00000627212 SLC4A10Q6U841 1118 aa12.56□□□□□ -0.4
RAPGEF6-215ENST00000627212 COG6Q9Y2V7 657 aa12.56□□□□□ -0.4
RAPGEF6-215ENST00000627212 NUTM2FA1L443 756 aa12.55□□□□□ -0.4
RAPGEF6-215ENST00000627212 RRP1P56182 461 aaKnown RBP12.54□□□□□ -0.4
RAPGEF6-215ENST00000627212 KIF3BO15066 747 aa12.54□□□□□ -0.4
RAPGEF6-215ENST00000627212 PMFBP1Q8TBY8 1022 aa12.54□□□□□ -0.4
RAPGEF6-215ENST00000627212 TRAK1Q9UPV9 953 aa12.54□□□□□ -0.4
RAPGEF6-215ENST00000627212 NACADO15069 1562 aa12.54□□□□□ -0.4
RAPGEF6-215ENST00000627212 KIAA1211Q6ZU35 1233 aa12.54□□□□□ -0.4
RAPGEF6-215ENST00000627212 TRIM6-TRIM34B2RNG4 842 aa12.53□□□□□ -0.4
RAPGEF6-215ENST00000627212 PDE3BQ13370 1112 aa12.53□□□□□ -0.4
RAPGEF6-215ENST00000627212 HDGFL2Q7Z4V5 671 aaPredicted RBP12.53□□□□□ -0.4
RAPGEF6-215ENST00000627212 KANK1Q14678 1352 aa12.53□□□□□ -0.4
RAPGEF6-215ENST00000627212 APAF1O14727 1248 aa12.52□□□□□ -0.4
RAPGEF6-215ENST00000627212 NRDCO43847 1150 aa12.52□□□□□ -0.4
RAPGEF6-215ENST00000627212 GSE1Q14687 1217 aa12.52□□□□□ -0.4
RAPGEF6-215ENST00000627212 ZNF330Q9Y3S2 320 aaPredicted RBP12.52□□□□□ -0.4
RAPGEF6-215ENST00000627212 CALD1Q05682 793 aaKnown RBP12.52□□□□□ -0.41
RAPGEF6-215ENST00000627212 PAK3O75914 559 aaPredicted RBP12.52□□□□□ -0.41
RAPGEF6-215ENST00000627212 ZBED9Q6R2W3 1325 aa12.52□□□□□ -0.41
RAPGEF6-215ENST00000627212 KIAA2012Q0VF49 1180 aa12.52□□□□□ -0.41
RAPGEF6-215ENST00000627212 GOLGA6L6A8MZA4 724 aa12.51□□□□□ -0.41
RAPGEF6-215ENST00000627212 FAM161AQ3B820 660 aa12.51□□□□□ -0.41
RAPGEF6-215ENST00000627212 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.51□□□□□ -0.411e-6■■■■□ 23
RAPGEF6-215ENST00000627212 MYBBP1AQ9BQG0 1328 aaKnown RBP12.51□□□□□ -0.41
RAPGEF6-215ENST00000627212 ANKRD30AQ9BXX3 1397 aa12.5□□□□□ -0.41
RAPGEF6-215ENST00000627212 NPHP1O15259 732 aa12.5□□□□□ -0.41
RAPGEF6-215ENST00000627212 FANCIQ9NVI1 1328 aa12.49□□□□□ -0.41
RAPGEF6-215ENST00000627212 CENPQQ7L2Z9 268 aaPredicted RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms