RNA–Protein interactions for RNA: ENST00000626019.2

NTRK3-220, Transcript of neurotrophic receptor tyrosine kinase 3, humanhuman

TSL 5 BASIC

Gene NTRK3, Length 2,741 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NTRK3-220ENST00000626019 PTPN23Q9H3S7 1636 aa13.98□□□□□ -0.17
NTRK3-220ENST00000626019 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.96□□□□□ -0.17
NTRK3-220ENST00000626019 PTPRKQ15262 1439 aa13.95□□□□□ -0.18
NTRK3-220ENST00000626019 MIA2Q96PC5 1412 aa13.95□□□□□ -0.18
NTRK3-220ENST00000626019 TCOF1Q13428 1488 aaKnown RBP13.95□□□□□ -0.18
NTRK3-220ENST00000626019 TSHZ2Q9NRE2 1034 aa13.94□□□□□ -0.18
NTRK3-220ENST00000626019 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.94□□□□□ -0.18
NTRK3-220ENST00000626019 CDC42BPAQ5VT25 1732 aa13.94□□□□□ -0.18
NTRK3-220ENST00000626019 MIER1Q8N108 512 aa13.94□□□□□ -0.18
NTRK3-220ENST00000626019 TTC37Q6PGP7 1564 aa13.93□□□□□ -0.18
NTRK3-220ENST00000626019 CFDP1Q9UEE9 299 aaPredicted RBP13.93□□□□□ -0.18
NTRK3-220ENST00000626019 ASXL2Q76L83 1435 aa13.92□□□□□ -0.18
NTRK3-220ENST00000626019 ZNF777Q9ULD5 760 aaPredicted RBP13.92□□□□□ -0.18
NTRK3-220ENST00000626019 WDR7Q9Y4E6 1490 aa13.91□□□□□ -0.18
NTRK3-220ENST00000626019 NPM1P06748 294 aaKnown RBP eCLIP13.91□□□□□ -0.18
NTRK3-220ENST00000626019 ITSN2Q9NZM3 1697 aa13.9□□□□□ -0.18
NTRK3-220ENST00000626019 CAMSAP2Q08AD1 1489 aa13.89□□□□□ -0.19
NTRK3-220ENST00000626019 CDC42BPBQ9Y5S2 1711 aa13.89□□□□□ -0.19
NTRK3-220ENST00000626019 SUPT16HQ9Y5B9 1047 aaKnown RBP13.88□□□□□ -0.19
NTRK3-220ENST00000626019 CHIC2Q9UKJ5 165 aa13.88□□□□□ -0.19
NTRK3-220ENST00000626019 PREX2Q70Z35 1606 aa13.87□□□□□ -0.19
NTRK3-220ENST00000626019 ABCC5O15440 1437 aa13.86□□□□□ -0.19
NTRK3-220ENST00000626019 CLSPNQ9HAW4 1339 aa13.85□□□□□ -0.19
NTRK3-220ENST00000626019 DAPK1P53355 1430 aa13.85□□□□□ -0.19
NTRK3-220ENST00000626019 RAB3GAP2Q9H2M9 1393 aa13.84□□□□□ -0.19
NTRK3-220ENST00000626019 MYO5CQ9NQX4 1742 aa13.84□□□□□ -0.19
NTRK3-220ENST00000626019 SAMD9LQ8IVG5 1584 aa13.84□□□□□ -0.19
NTRK3-220ENST00000626019 PLCH2O75038 1416 aa13.84□□□□□ -0.19
NTRK3-220ENST00000626019 HNRNPMP52272 730 aaKnown RBP eCLIP13.84□□□□□ -0.19
NTRK3-220ENST00000626019 DNMT1P26358 1616 aaKnown RBP13.83□□□□□ -0.2
NTRK3-220ENST00000626019 ARHGAP5Q13017 1502 aa13.83□□□□□ -0.2
NTRK3-220ENST00000626019 SETD5Q9C0A6 1442 aa13.83□□□□□ -0.2
NTRK3-220ENST00000626019 RRP7BPQ9NSQ0 103 aa13.83□□□□□ -0.2
NTRK3-220ENST00000626019 ABCA9Q8IUA7 1624 aa13.81□□□□□ -0.2
NTRK3-220ENST00000626019 MBD5Q9P267 1494 aa13.8□□□□□ -0.2
NTRK3-220ENST00000626019 NAIPQ13075 1403 aa13.8□□□□□ -0.2
NTRK3-220ENST00000626019 HFM1A2PYH4 1435 aa13.79□□□□□ -0.2
NTRK3-220ENST00000626019 MAPKBP1O60336 1514 aa13.79□□□□□ -0.2
NTRK3-220ENST00000626019 ARHGEF12Q9NZN5 1544 aa13.79□□□□□ -0.2
NTRK3-220ENST00000626019 AKNAQ7Z591 1439 aa13.78□□□□□ -0.2
NTRK3-220ENST00000626019 EFCAB2Q5VUJ9 269 aa13.77□□□□□ -0.2
NTRK3-220ENST00000626019 SYCP2Q9BX26 1530 aa13.77□□□□□ -0.2
NTRK3-220ENST00000626019 KDM6BO15054 1643 aa13.76□□□□□ -0.21
NTRK3-220ENST00000626019 DHX57Q6P158 1386 aaKnown RBP13.76□□□□□ -0.21
NTRK3-220ENST00000626019 CROCC2H7BZ55 1655 aa13.76□□□□□ -0.21
NTRK3-220ENST00000626019 ARHGEF5Q12774 1597 aa13.75□□□□□ -0.21
NTRK3-220ENST00000626019 CD109Q6YHK3 1445 aa13.74□□□□□ -0.21
NTRK3-220ENST00000626019 ROCK1Q13464 1354 aa13.74□□□□□ -0.21
NTRK3-220ENST00000626019 FANCAO15360 1455 aa13.74□□□□□ -0.21
NTRK3-220ENST00000626019 ARAP3Q8WWN8 1544 aa13.74□□□□□ -0.21
NTRK3-220ENST00000626019 NCOA1Q15788 1441 aa13.74□□□□□ -0.21
NTRK3-220ENST00000626019 KIAA1107Q9UPP5 1409 aa13.73□□□□□ -0.21
NTRK3-220ENST00000626019 C9orf84Q5VXU9 1444 aa13.73□□□□□ -0.21
NTRK3-220ENST00000626019 CCDC141Q6ZP82 1450 aa13.73□□□□□ -0.21
NTRK3-220ENST00000626019 ABCC1P33527 1531 aa13.73□□□□□ -0.21
NTRK3-220ENST00000626019 TRAPPC8Q9Y2L5 1435 aa13.72□□□□□ -0.21
NTRK3-220ENST00000626019 GCC2Q8IWJ2 1684 aa13.72□□□□□ -0.21
NTRK3-220ENST00000626019 TSPY4P0CV99 314 aa13.72□□□□□ -0.21
NTRK3-220ENST00000626019 TSPY10P0CW01 314 aa13.72□□□□□ -0.21
NTRK3-220ENST00000626019 ADGRL2O95490 1459 aa13.71□□□□□ -0.21
NTRK3-220ENST00000626019 PLEKHH2Q8IVE3 1493 aa13.71□□□□□ -0.22
NTRK3-220ENST00000626019 SHANK2Q9UPX8 1470 aa13.71□□□□□ -0.22
NTRK3-220ENST00000626019 ADGBQ8N7X0 1667 aa13.7□□□□□ -0.22
NTRK3-220ENST00000626019 FAM69CQ0P6D2 419 aa13.7□□□□□ -0.22
NTRK3-220ENST00000626019 AFAP1Q8N556 730 aa13.7□□□□□ -0.22
NTRK3-220ENST00000626019 RSPH4AQ5TD94 716 aa13.7□□□□□ -0.22
NTRK3-220ENST00000626019 DIP2BQ9P265 1576 aa13.69□□□□□ -0.22
NTRK3-220ENST00000626019 ANKRD30AQ9BXX3 1397 aa13.69□□□□□ -0.22
NTRK3-220ENST00000626019 MAP3K4Q9Y6R4 1608 aa13.68□□□□□ -0.22
NTRK3-220ENST00000626019 ADGRL1O94910 1474 aa13.68□□□□□ -0.22
NTRK3-220ENST00000626019 GLI2P10070 1586 aa13.68□□□□□ -0.22
NTRK3-220ENST00000626019 SCAPERQ9BY12 1400 aa13.68□□□□□ -0.22
NTRK3-220ENST00000626019 ERICH6Q7L0X2 663 aa13.67□□□□□ -0.22
NTRK3-220ENST00000626019 DNAJC5Q9H3Z4 198 aa13.66□□□□□ -0.22
NTRK3-220ENST00000626019 MAST1Q9Y2H9 1570 aa13.65□□□□□ -0.22
NTRK3-220ENST00000626019 KIF15Q9NS87 1388 aa13.65□□□□□ -0.22
NTRK3-220ENST00000626019 TRIM52Q96A61 297 aa13.64□□□□□ -0.23
NTRK3-220ENST00000626019 ANKRD50Q9ULJ7 1429 aa13.64□□□□□ -0.23
NTRK3-220ENST00000626019 DENND4BO75064 1496 aaPredicted RBP13.62□□□□□ -0.23
NTRK3-220ENST00000626019 SPAG9O60271 1321 aaKnown RBP13.62□□□□□ -0.23
NTRK3-220ENST00000626019 KIF13AQ9H1H9 1805 aa13.62□□□□□ -0.23
NTRK3-220ENST00000626019 TSPOAP1O95153 1857 aa13.62□□□□□ -0.23
NTRK3-220ENST00000626019 PPRC1Q5VV67 1664 aaKnown RBP13.61□□□□□ -0.23
NTRK3-220ENST00000626019 RAPGEF3O95398 923 aa13.61□□□□□ -0.23
NTRK3-220ENST00000626019 NEO1Q92859 1461 aa13.61□□□□□ -0.23
NTRK3-220ENST00000626019 CFAP74Q9C0B2 1584 aa13.61□□□□□ -0.23
NTRK3-220ENST00000626019 ZFYVE16Q7Z3T8 1539 aa13.6□□□□□ -0.23
NTRK3-220ENST00000626019 PLXNC1O60486 1568 aa13.6□□□□□ -0.23
NTRK3-220ENST00000626019 MPHOSPH9Q99550 1183 aa13.59□□□□□ -0.23
NTRK3-220ENST00000626019 SIN3AQ96ST3 1273 aa13.59□□□□□ -0.23
NTRK3-220ENST00000626019 RTEL1-TNFRSF6BF6WH68 1400 aa13.58□□□□□ -0.23
NTRK3-220ENST00000626019 FOXD1Q16676 465 aa13.58□□□□□ -0.24
NTRK3-220ENST00000626019 BCANQ96GW7 911 aa13.58□□□□□ -0.24
NTRK3-220ENST00000626019 POGZQ7Z3K3 1410 aa13.58□□□□□ -0.24
NTRK3-220ENST00000626019 INO80Q9ULG1 1556 aaPredicted RBP13.58□□□□□ -0.24
NTRK3-220ENST00000626019 ZNF518AQ6AHZ1 1483 aa13.57□□□□□ -0.24
NTRK3-220ENST00000626019 ATP7AQ04656 1500 aa13.57□□□□□ -0.24
NTRK3-220ENST00000626019 MYT1LQ9UL68 1186 aa13.57□□□□□ -0.24
NTRK3-220ENST00000626019 RBM19Q9Y4C8 960 aaKnown RBP13.56□□□□□ -0.24
NTRK3-220ENST00000626019 PZPP20742 1482 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms