RNA–Protein interactions for RNA: ENST00000624145.3

ANKRD28-215, Transcript of ankyrin repeat domain 28, human

TSL 2 BASIC

Gene ANKRD28, Length 6,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ANKRD28-215	ENST00000624145	SUPT16H	Q9Y5B9	1047 aa	Known RBP	5.09	□□□□□ -1.59
ANKRD28-215	ENST00000624145	SENP3-EIF4A1	A0A087X0R7	540 aa		5.09	□□□□□ -1.6
ANKRD28-215	ENST00000624145	GORAB	Q5T7V8	394 aa		5.09	□□□□□ -1.6
ANKRD28-215	ENST00000624145	HOMEZ	Q8IX15	550 aa		5.09	□□□□□ -1.6
ANKRD28-215	ENST00000624145	PATL2	C9JE40	543 aa	Known RBP	5.08	□□□□□ -1.6
ANKRD28-215	ENST00000624145	RRP7BP	Q9NSQ0	103 aa		5.08	□□□□□ -1.6
ANKRD28-215	ENST00000624145	CNKSR2	Q8WXI2	1034 aa		5.08	□□□□□ -1.6
ANKRD28-215	ENST00000624145	GPATCH3	Q96I76	525 aa		5.08	□□□□□ -1.6
ANKRD28-215	ENST00000624145	RRP12	Q5JTH9	1297 aa	Known RBP	5.08	□□□□□ -1.6
ANKRD28-215	ENST00000624145	MIER1	Q8N108	512 aa		5.08	□□□□□ -1.6
ANKRD28-215	ENST00000624145	ZNF330	Q9Y3S2	320 aa	Predicted RBP	5.08	□□□□□ -1.6
ANKRD28-215	ENST00000624145	HDGF	P51858	240 aa	Known RBP	5.07	□□□□□ -1.6
ANKRD28-215	ENST00000624145	CCDC70	Q6NSX1	233 aa		5.07	□□□□□ -1.6
ANKRD28-215	ENST00000624145	TSR1	Q2NL82	804 aa	Known RBP	5.07	□□□□□ -1.6
ANKRD28-215	ENST00000624145	TAF7L	Q5H9L4	462 aa		5.07	□□□□□ -1.6
ANKRD28-215	ENST00000624145	PLEKHD1	A6NEE1	506 aa		5.07	□□□□□ -1.6
ANKRD28-215	ENST00000624145	TPM2	P07951	284 aa		5.07	□□□□□ -1.6
ANKRD28-215	ENST00000624145	ANO8	Q9HCE9	1232 aa	Predicted RBP	5.07	□□□□□ -1.6
ANKRD28-215	ENST00000624145	APBB1	O00213	710 aa		5.07	□□□□□ -1.6
ANKRD28-215	ENST00000624145	SOX12	O15370	315 aa		5.06	□□□□□ -1.6
ANKRD28-215	ENST00000624145	GPS2	Q13227	327 aa		5.06	□□□□□ -1.6
ANKRD28-215	ENST00000624145	WWC1	Q8IX03	1113 aa		5.06	□□□□□ -1.6
ANKRD28-215	ENST00000624145	RSF1	Q96T23	1441 aa	Predicted RBP	5.06	□□□□□ -1.6
ANKRD28-215	ENST00000624145	PES1	O00541	588 aa	Known RBP	5.06	□□□□□ -1.6
ANKRD28-215	ENST00000624145	IPO8	O15397	1037 aa	Known RBP	5.06	□□□□□ -1.6
ANKRD28-215	ENST00000624145	TPD52L1	Q16890	204 aa	Predicted RBP	5.06	□□□□□ -1.6
ANKRD28-215	ENST00000624145	CC2D1B	Q5T0F9	858 aa	Known RBP	5.06	□□□□□ -1.6
ANKRD28-215	ENST00000624145	CHMP4A	Q9BY43	222 aa		5.06	□□□□□ -1.6
ANKRD28-215	ENST00000624145	CSB-PGBD3	P0DP91	1061 aa		5.06	□□□□□ -1.6
ANKRD28-215	ENST00000624145	TCEAL9	Q9UHQ7	104 aa		5.06	□□□□□ -1.6
ANKRD28-215	ENST00000624145	CHMP3	Q9Y3E7	222 aa		5.05	□□□□□ -1.6
ANKRD28-215	ENST00000624145	KIF3A	Q9Y496	699 aa		5.05	□□□□□ -1.6
ANKRD28-215	ENST00000624145	PHF14	O94880	888 aa		5.05	□□□□□ -1.6
ANKRD28-215	ENST00000624145	TPM1	P09493	284 aa		5.05	□□□□□ -1.6
ANKRD28-215	ENST00000624145	CALD1	Q05682	793 aa	Known RBP	5.05	□□□□□ -1.6
ANKRD28-215	ENST00000624145	HDAC5	Q9UQL6	1122 aa		5.05	□□□□□ -1.6
ANKRD28-215	ENST00000624145	DEK	P35659	375 aa	Known RBP	5.05	□□□□□ -1.6
ANKRD28-215	ENST00000624145	TOMM22	Q9NS69	142 aa		5.04	□□□□□ -1.6
ANKRD28-215	ENST00000624145	SRPK2	P78362	688 aa	Known RBP	5.04	□□□□□ -1.6
ANKRD28-215	ENST00000624145	GZF1	Q9H116	711 aa	Predicted RBP	5.04	□□□□□ -1.6
ANKRD28-215	ENST00000624145	GOLGA6L3	A6NEY3	463 aa		5.04	□□□□□ -1.6
ANKRD28-215	ENST00000624145	SF3A1	Q15459	793 aa	Known RBP	5.04	□□□□□ -1.6
ANKRD28-215	ENST00000624145	CCDC9	Q9Y3X0	531 aa	Known RBP	5.04	□□□□□ -1.6
ANKRD28-215	ENST00000624145	TMF1	P82094	1093 aa		5.04	□□□□□ -1.6
ANKRD28-215	ENST00000624145	FRAT2	O75474	233 aa	Predicted RBP	5.04	□□□□□ -1.6
ANKRD28-215	ENST00000624145	MORC1	Q86VD1	984 aa		5.04	□□□□□ -1.6
ANKRD28-215	ENST00000624145	CCAR2	Q8N163	923 aa	Known RBP	5.03	□□□□□ -1.6
ANKRD28-215	ENST00000624145	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	5.03	□□□□□ -1.6	3e-11	■■■■■ 217.2
ANKRD28-215	ENST00000624145	CTDP1	Q9Y5B0	961 aa	Predicted RBP	5.03	□□□□□ -1.6
ANKRD28-215	ENST00000624145	KIF16B	Q96L93	1317 aa		5.03	□□□□□ -1.6
ANKRD28-215	ENST00000624145	HMGB1	P09429	215 aa	Known RBP	5.03	□□□□□ -1.6
ANKRD28-215	ENST00000624145	KANK1	Q14678	1352 aa		5.03	□□□□□ -1.6
ANKRD28-215	ENST00000624145	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	5.03	□□□□□ -1.6
ANKRD28-215	ENST00000624145	TRIM6-TRIM34	B2RNG4	842 aa		5.03	□□□□□ -1.6
ANKRD28-215	ENST00000624145	STK31	Q9BXU1	1019 aa		5.03	□□□□□ -1.6
ANKRD28-215	ENST00000624145	RWDD1	Q9H446	243 aa	Predicted RBP	5.03	□□□□□ -1.6
ANKRD28-215	ENST00000624145	SPAG9	O60271	1321 aa	Known RBP	5.02	□□□□□ -1.61
ANKRD28-215	ENST00000624145	HMMR	O75330	724 aa		5.02	□□□□□ -1.61
ANKRD28-215	ENST00000624145	CDR1	P51861	262 aa		5.02	□□□□□ -1.61
ANKRD28-215	ENST00000624145	PODXL2	Q9NZ53	605 aa		5.02	□□□□□ -1.61
ANKRD28-215	ENST00000624145	TCERG1	O14776	1098 aa	Known RBP	5.02	□□□□□ -1.61
ANKRD28-215	ENST00000624145	B4GALNT3	Q6L9W6	998 aa		5.02	□□□□□ -1.61
ANKRD28-215	ENST00000624145	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	5.02	□□□□□ -1.61
ANKRD28-215	ENST00000624145	ITPRIP	Q8IWB1	547 aa		5.02	□□□□□ -1.61
ANKRD28-215	ENST00000624145	CFDP1	Q9UEE9	299 aa	Predicted RBP	5.02	□□□□□ -1.61
ANKRD28-215	ENST00000624145	CHMP4C	Q96CF2	233 aa		5.02	□□□□□ -1.61
ANKRD28-215	ENST00000624145	IPO7	O95373	1038 aa	Known RBP	5.02	□□□□□ -1.61
ANKRD28-215	ENST00000624145	AKAP17A	Q02040	695 aa	Known RBP	5.02	□□□□□ -1.61
ANKRD28-215	ENST00000624145	PAK3	O75914	559 aa	Predicted RBP	5.02	□□□□□ -1.61
ANKRD28-215	ENST00000624145	CCDC47	Q96A33	483 aa	Known RBP	5.02	□□□□□ -1.61
ANKRD28-215	ENST00000624145	TRIM34	Q9BYJ4	488 aa		5.02	□□□□□ -1.61
ANKRD28-215	ENST00000624145	GTF2E1	P29083	439 aa	Predicted RBP	5.01	□□□□□ -1.61
ANKRD28-215	ENST00000624145	SLK	Q9H2G2	1235 aa	Predicted RBP	5.01	□□□□□ -1.61
ANKRD28-215	ENST00000624145	GOLGA6L19	H0YKK7	550 aa		5.01	□□□□□ -1.61
ANKRD28-215	ENST00000624145		H3BQV1	296 aa		5.01	□□□□□ -1.61
ANKRD28-215	ENST00000624145	IFFO2	Q5TF58	517 aa		5.01	□□□□□ -1.61
ANKRD28-215	ENST00000624145	PCMTD1	Q96MG8	357 aa	Predicted RBP	5.01	□□□□□ -1.61
ANKRD28-215	ENST00000624145	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	5.01	□□□□□ -1.61
ANKRD28-215	ENST00000624145	AMOTL1	Q8IY63	956 aa		5.01	□□□□□ -1.61
ANKRD28-215	ENST00000624145	CWC22	Q9HCG8	908 aa	Known RBP	5.01	□□□□□ -1.61
ANKRD28-215	ENST00000624145	ANKRD20A12P	Q8NF67	263 aa		5	□□□□□ -1.61
ANKRD28-215	ENST00000624145	TEX35	Q5T0J7	233 aa		5	□□□□□ -1.61
ANKRD28-215	ENST00000624145	PMFBP1	Q8TBY8	1022 aa		5	□□□□□ -1.61
ANKRD28-215	ENST00000624145	NOL10	Q9BSC4	688 aa	Known RBP	5	□□□□□ -1.61
ANKRD28-215	ENST00000624145	MFAP1	P55081	439 aa	Known RBP	5	□□□□□ -1.61
ANKRD28-215	ENST00000624145	NOL8	Q76FK4	1167 aa	Known RBP	5	□□□□□ -1.61
ANKRD28-215	ENST00000624145	ZNF771	Q7L3S4	317 aa	Predicted RBP	5	□□□□□ -1.61
ANKRD28-215	ENST00000624145	ST18	O60284	1047 aa		5	□□□□□ -1.61
ANKRD28-215	ENST00000624145	RUFY1	Q96T51	708 aa		5	□□□□□ -1.61
ANKRD28-215	ENST00000624145	BECN2	A8MW95	431 aa		5	□□□□□ -1.61
ANKRD28-215	ENST00000624145	ODF2	Q5BJF6	829 aa		5	□□□□□ -1.61
ANKRD28-215	ENST00000624145	CCDC43	Q96MW1	224 aa	Known RBP	5	□□□□□ -1.61
ANKRD28-215	ENST00000624145	SYNE3	Q6ZMZ3	975 aa		4.99	□□□□□ -1.61
ANKRD28-215	ENST00000624145	FAM184A	Q8NB25	1140 aa		4.99	□□□□□ -1.61
ANKRD28-215	ENST00000624145	AK7	Q96M32	723 aa		4.99	□□□□□ -1.61
ANKRD28-215	ENST00000624145	TRH	P20396	242 aa	Predicted RBP	4.99	□□□□□ -1.61
ANKRD28-215	ENST00000624145	CT47A1	Q5JQC4	288 aa	Predicted RBP	4.99	□□□□□ -1.61
ANKRD28-215	ENST00000624145	DCAF1	Q9Y4B6	1507 aa		4.99	□□□□□ -1.61
ANKRD28-215	ENST00000624145	PRKCSH	P14314	528 aa	Predicted RBP	4.99	□□□□□ -1.61
ANKRD28-215	ENST00000624145	RAD21	O60216	631 aa		4.99	□□□□□ -1.61

Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms