RNA–Protein interactions for RNA: ENST00000623364.3

CDKL5-204, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 3

Gene CDKL5, Length 483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-204ENST00000623364 CAMSAP1Q5T5Y3 1602 aa12.17□□□□□ -0.46
CDKL5-204ENST00000623364 ZFYVE16Q7Z3T8 1539 aa12.16□□□□□ -0.46
CDKL5-204ENST00000623364 DENND4BO75064 1496 aaPredicted RBP12.16□□□□□ -0.46
CDKL5-204ENST00000623364 EFCAB5A4FU69 1503 aa12.16□□□□□ -0.46
CDKL5-204ENST00000623364 DISP1Q96F81 1524 aa12.16□□□□□ -0.46
CDKL5-204ENST00000623364 PKD2Q13563 968 aa12.14□□□□□ -0.47
CDKL5-204ENST00000623364 IQGAP2Q13576 1575 aa12.13□□□□□ -0.47
CDKL5-204ENST00000623364 FHOD3Q2V2M9 1422 aa12.13□□□□□ -0.47
CDKL5-204ENST00000623364 TRAPPC8Q9Y2L5 1435 aa12.13□□□□□ -0.47
CDKL5-204ENST00000623364 CPS1P31327 1500 aa12.13□□□□□ -0.47
CDKL5-204ENST00000623364 ABCA9Q8IUA7 1624 aa12.12□□□□□ -0.47
CDKL5-204ENST00000623364 RICTORQ6R327 1708 aa12.12□□□□□ -0.47
CDKL5-204ENST00000623364 RBM33Q96EV2 1170 aaKnown RBP12.12□□□□□ -0.47
CDKL5-204ENST00000623364 PPP6R1Q9UPN7 881 aa12.12□□□□□ -0.47
CDKL5-204ENST00000623364 MAGI2Q86UL8 1455 aa12.11□□□□□ -0.47
CDKL5-204ENST00000623364 ZMYM4Q5VZL5 1548 aa12.1□□□□□ -0.47
CDKL5-204ENST00000623364 BIVM-ERCC5R4GMW8 1640 aa12.09□□□□□ -0.47
CDKL5-204ENST00000623364 ZRANB1Q9UGI0 708 aa12.09□□□□□ -0.47
CDKL5-204ENST00000623364 ALKQ9UM73 1620 aa12.08□□□□□ -0.48
CDKL5-204ENST00000623364 TRIM52Q96A61 297 aa12.07□□□□□ -0.48
CDKL5-204ENST00000623364 ESF1Q9H501 851 aaKnown RBP12.06□□□□□ -0.48
CDKL5-204ENST00000623364 C3P01024 1663 aa12.06□□□□□ -0.48
CDKL5-204ENST00000623364 ATP10AO60312 1499 aa12.04□□□□□ -0.48
CDKL5-204ENST00000623364 PLA2R1Q13018 1463 aa12.04□□□□□ -0.48
CDKL5-204ENST00000623364 C9orf84Q5VXU9 1444 aa12.03□□□□□ -0.48
CDKL5-204ENST00000623364 SHANK2Q9UPX8 1470 aa12.03□□□□□ -0.48
CDKL5-204ENST00000623364 IGF1RP08069 1367 aa12.03□□□□□ -0.48
CDKL5-204ENST00000623364 TCOF1Q13428 1488 aaKnown RBP12.02□□□□□ -0.49
CDKL5-204ENST00000623364 ADRA2BP18089 450 aa12□□□□□ -0.49
CDKL5-204ENST00000623364 RAPGEF2Q9Y4G8 1499 aa12□□□□□ -0.49
CDKL5-204ENST00000623364 UGGT2Q9NYU1 1516 aa12□□□□□ -0.49
CDKL5-204ENST00000623364 ABCA8O94911 1581 aa12□□□□□ -0.49
CDKL5-204ENST00000623364 HECW1Q76N89 1606 aa11.99□□□□□ -0.49
CDKL5-204ENST00000623364 SETBP1Q9Y6X0 1596 aa11.98□□□□□ -0.49
CDKL5-204ENST00000623364 CFAP74Q9C0B2 1584 aa11.96□□□□□ -0.49
CDKL5-204ENST00000623364 ARID3CA6NKF2 412 aa11.96□□□□□ -0.49
CDKL5-204ENST00000623364 SUPT6HQ7KZ85 1726 aaKnown RBP11.96□□□□□ -0.49
CDKL5-204ENST00000623364 LRRC7Q96NW7 1537 aa11.96□□□□□ -0.5
CDKL5-204ENST00000623364 NPATQ14207 1427 aa11.95□□□□□ -0.5
CDKL5-204ENST00000623364 ZNF772Q68DY9 489 aaPredicted RBP11.95□□□□□ -0.5
CDKL5-204ENST00000623364 CARMIL1Q5VZK9 1371 aa11.93□□□□□ -0.5
CDKL5-204ENST00000623364 RXRBP28702 533 aa11.93□□□□□ -0.5
CDKL5-204ENST00000623364 YY1P25490 414 aa11.92□□□□□ -0.5
CDKL5-204ENST00000623364 RNF17Q9BXT8 1623 aaKnown RBP11.92□□□□□ -0.5
CDKL5-204ENST00000623364 ATP10BO94823 1461 aa11.91□□□□□ -0.5
CDKL5-204ENST00000623364 CNTLNQ9NXG0 1405 aa11.91□□□□□ -0.5
CDKL5-204ENST00000623364 CDK12Q9NYV4 1490 aaPredicted RBP11.9□□□□□ -0.5
CDKL5-204ENST00000623364 FAM9AQ8IZU1 332 aaPredicted RBP11.9□□□□□ -0.5
CDKL5-204ENST00000623364 ZNF142P52746 1687 aaPredicted RBP11.89□□□□□ -0.51
CDKL5-204ENST00000623364 KIF27Q86VH2 1401 aa11.88□□□□□ -0.51
CDKL5-204ENST00000623364 SENP3-EIF4A1A0A087X0R7 540 aa11.88□□□□□ -0.51
CDKL5-204ENST00000623364 CEP170BQ9Y4F5 1589 aaPredicted RBP11.87□□□□□ -0.51
CDKL5-204ENST00000623364 VWDEQ8N2E2 1590 aa11.86□□□□□ -0.51
CDKL5-204ENST00000623364 SCAPERQ9BY12 1400 aa11.86□□□□□ -0.51
CDKL5-204ENST00000623364 MEX3CQ5U5Q3 659 aaKnown RBP11.85□□□□□ -0.51
CDKL5-204ENST00000623364 MYO3AQ8NEV4 1616 aa11.85□□□□□ -0.51
CDKL5-204ENST00000623364 AGLP35573 1532 aa11.85□□□□□ -0.51
CDKL5-204ENST00000623364 FAM135BQ49AJ0 1406 aa11.85□□□□□ -0.51
CDKL5-204ENST00000623364 GOLGA3Q08378 1498 aa11.84□□□□□ -0.51
CDKL5-204ENST00000623364 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.84□□□□□ -0.51
CDKL5-204ENST00000623364 HNRNPUL2Q1KMD3 747 aaKnown RBP11.84□□□□□ -0.51
CDKL5-204ENST00000623364 LRP5O75197 1615 aa11.83□□□□□ -0.52
CDKL5-204ENST00000623364 NUTM2BA6NNL0 878 aaPredicted RBP11.83□□□□□ -0.52
CDKL5-204ENST00000623364 NUTM2EB1AL46 878 aaPredicted RBP11.83□□□□□ -0.52
CDKL5-204ENST00000623364 NUTM2DQ5VT03 806 aaPredicted RBP11.83□□□□□ -0.52
CDKL5-204ENST00000623364 NUTM2AQ8IVF1 878 aaPredicted RBP11.83□□□□□ -0.52
CDKL5-204ENST00000623364 MYT1LQ9UL68 1186 aa11.82□□□□□ -0.52
CDKL5-204ENST00000623364 RAPGEF6Q8TEU7 1601 aa11.82□□□□□ -0.52
CDKL5-204ENST00000623364 ZMYM3Q14202 1370 aa11.81□□□□□ -0.52
CDKL5-204ENST00000623364 POLR1AO95602 1720 aaPredicted RBP11.81□□□□□ -0.52
CDKL5-204ENST00000623364 JCADQ9P266 1359 aa11.79□□□□□ -0.52
CDKL5-204ENST00000623364 SYNMO15061 1565 aa11.79□□□□□ -0.52
CDKL5-204ENST00000623364 NEURL4Q96JN8 1562 aa11.79□□□□□ -0.52
CDKL5-204ENST00000623364 MROH2AA6NES4 1674 aa11.79□□□□□ -0.52
CDKL5-204ENST00000623364 ATAD2Q6PL18 1390 aa11.79□□□□□ -0.52
CDKL5-204ENST00000623364 REREQ9P2R6 1566 aa11.78□□□□□ -0.52
CDKL5-204ENST00000623364 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.77□□□□□ -0.52
CDKL5-204ENST00000623364 ANKLE2Q86XL3 938 aa11.77□□□□□ -0.53
CDKL5-204ENST00000623364 CDK13Q14004 1512 aaKnown RBP11.76□□□□□ -0.53
CDKL5-204ENST00000623364 A2ML1A8K2U0 1454 aa11.75□□□□□ -0.53
CDKL5-204ENST00000623364 SPATA31A6Q5VVP1 1343 aa11.74□□□□□ -0.53
CDKL5-204ENST00000623364 DNMT1P26358 1616 aaKnown RBP11.74□□□□□ -0.53
CDKL5-204ENST00000623364 PLEKHD1A6NEE1 506 aa11.73□□□□□ -0.53
CDKL5-204ENST00000623364 RGS12O14924 1447 aa11.73□□□□□ -0.53
CDKL5-204ENST00000623364 ZNF518AQ6AHZ1 1483 aa11.73□□□□□ -0.53
CDKL5-204ENST00000623364 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.73□□□□□ -0.53
CDKL5-204ENST00000623364 DIP2CQ9Y2E4 1556 aa11.73□□□□□ -0.53
CDKL5-204ENST00000623364 NPHP4O75161 1426 aaPredicted RBP11.72□□□□□ -0.53
CDKL5-204ENST00000623364 CCDC125Q86Z20 511 aa11.72□□□□□ -0.53
CDKL5-204ENST00000623364 STRCP1A6NGW2 1772 aa11.72□□□□□ -0.53
CDKL5-204ENST00000623364 ROBO1Q9Y6N7 1651 aa11.71□□□□□ -0.54
CDKL5-204ENST00000623364 LRP6O75581 1613 aa11.71□□□□□ -0.54
CDKL5-204ENST00000623364 SLC34A2O95436 690 aa11.69□□□□□ -0.54
CDKL5-204ENST00000623364 RBM6P78332 1123 aaKnown RBP11.69□□□□□ -0.54
CDKL5-204ENST00000623364 AFAP1Q8N556 730 aa11.68□□□□□ -0.54
CDKL5-204ENST00000623364 MED14O60244 1454 aa11.68□□□□□ -0.54
CDKL5-204ENST00000623364 PHLPP1O60346 1717 aa11.67□□□□□ -0.54
CDKL5-204ENST00000623364 KDM5CP41229 1560 aa11.67□□□□□ -0.54
CDKL5-204ENST00000623364 EFCAB2Q5VUJ9 269 aa11.66□□□□□ -0.54
CDKL5-204ENST00000623364 ABCA6Q8N139 1617 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms