RNA–Protein interactions for RNA: ENST00000622817.4

CBWD3-219, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,877 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-219ENST00000622817 FAM50AQ14320 339 aaKnown RBP10.55□□□□□ -0.72
CBWD3-219ENST00000622817 ADCY10Q96PN6 1610 aa10.54□□□□□ -0.72
CBWD3-219ENST00000622817 KDM5BQ9UGL1 1544 aa10.54□□□□□ -0.72
CBWD3-219ENST00000622817 MIA2Q96PC5 1412 aa10.53□□□□□ -0.72
CBWD3-219ENST00000622817 KIF14Q15058 1648 aa10.52□□□□□ -0.73
CBWD3-219ENST00000622817 ZCCHC11Q5TAX3 1644 aaKnown RBP10.51□□□□□ -0.73
CBWD3-219ENST00000622817 PTPN23Q9H3S7 1636 aa10.51□□□□□ -0.73
CBWD3-219ENST00000622817 TCOF1Q13428 1488 aaKnown RBP10.5□□□□□ -0.73
CBWD3-219ENST00000622817 ITGAEP38570 1179 aa10.5□□□□□ -0.73
CBWD3-219ENST00000622817 CAPN15O75808 1086 aa10.49□□□□□ -0.73
CBWD3-219ENST00000622817 ABCC10Q5T3U5 1492 aa10.49□□□□□ -0.73
CBWD3-219ENST00000622817 GPATCH8Q9UKJ3 1502 aaKnown RBP10.49□□□□□ -0.73
CBWD3-219ENST00000622817 ITSN2Q9NZM3 1697 aa10.48□□□□□ -0.73
CBWD3-219ENST00000622817 NPM1P06748 294 aaKnown RBP eCLIP10.48□□□□□ -0.73
CBWD3-219ENST00000622817 CFDP1Q9UEE9 299 aaPredicted RBP10.48□□□□□ -0.73
CBWD3-219ENST00000622817 DSG3P32926 999 aa10.47□□□□□ -0.73
CBWD3-219ENST00000622817 MYCNP04198 464 aaPredicted RBP10.46□□□□□ -0.74
CBWD3-219ENST00000622817 HRCP23327 699 aa10.46□□□□□ -0.74
CBWD3-219ENST00000622817 RIMBP3CA6NJZ7 1639 aa10.45□□□□□ -0.74
CBWD3-219ENST00000622817 RIMBP3BA6NNM3 1639 aa10.45□□□□□ -0.74
CBWD3-219ENST00000622817 RIMBP3Q9UFD9 1639 aa10.45□□□□□ -0.74
CBWD3-219ENST00000622817 SAMD1Q6SPF0 538 aaPredicted RBP10.45□□□□□ -0.74
CBWD3-219ENST00000622817 KCNH8Q96L42 1107 aa10.45□□□□□ -0.74
CBWD3-219ENST00000622817 WDR7Q9Y4E6 1490 aa10.45□□□□□ -0.74
CBWD3-219ENST00000622817 CDC42BPAQ5VT25 1732 aa10.44□□□□□ -0.74
CBWD3-219ENST00000622817 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.44□□□□□ -0.74
CBWD3-219ENST00000622817 CCER1Q8TC90 406 aaPredicted RBP10.43□□□□□ -0.74
CBWD3-219ENST00000622817 FOXD4L1Q9NU39 408 aa10.43□□□□□ -0.74
CBWD3-219ENST00000622817 ZNF644Q9H582 1327 aaPredicted RBP10.43□□□□□ -0.74
CBWD3-219ENST00000622817 ASXL2Q76L83 1435 aa10.43□□□□□ -0.74
CBWD3-219ENST00000622817 SETD5Q9C0A6 1442 aa10.43□□□□□ -0.74
CBWD3-219ENST00000622817 CAMSAP2Q08AD1 1489 aa10.43□□□□□ -0.74
CBWD3-219ENST00000622817 CYB5RLQ6IPT4 315 aa10.42□□□□□ -0.74
CBWD3-219ENST00000622817 ZNF777Q9ULD5 760 aaPredicted RBP10.42□□□□□ -0.74
CBWD3-219ENST00000622817 PTPRKQ15262 1439 aa10.42□□□□□ -0.74
CBWD3-219ENST00000622817 TTC37Q6PGP7 1564 aa10.42□□□□□ -0.74
CBWD3-219ENST00000622817 ZEB1P37275 1124 aaPredicted RBP10.42□□□□□ -0.74
CBWD3-219ENST00000622817 PREX2Q70Z35 1606 aa10.41□□□□□ -0.74
CBWD3-219ENST00000622817 DNMT1P26358 1616 aaKnown RBP10.4□□□□□ -0.74
CBWD3-219ENST00000622817 DAPK1P53355 1430 aa10.4□□□□□ -0.74
CBWD3-219ENST00000622817 HFM1A2PYH4 1435 aa10.4□□□□□ -0.74
CBWD3-219ENST00000622817 ABCC5O15440 1437 aa10.4□□□□□ -0.74
CBWD3-219ENST00000622817 PLCH2O75038 1416 aa10.4□□□□□ -0.74
CBWD3-219ENST00000622817 MYO5CQ9NQX4 1742 aa10.39□□□□□ -0.75
CBWD3-219ENST00000622817 RAB3GAP2Q9H2M9 1393 aa10.39□□□□□ -0.75
CBWD3-219ENST00000622817 ZNF219Q9P2Y4 722 aaPredicted RBP10.39□□□□□ -0.75
CBWD3-219ENST00000622817 CDC42BPBQ9Y5S2 1711 aa10.39□□□□□ -0.75
CBWD3-219ENST00000622817 ARHGAP5Q13017 1502 aa10.39□□□□□ -0.75
CBWD3-219ENST00000622817 AKNAQ7Z591 1439 aa10.39□□□□□ -0.75
CBWD3-219ENST00000622817 ROCK1Q13464 1354 aa10.38□□□□□ -0.75
CBWD3-219ENST00000622817 ZBTB22O15209 634 aa10.38□□□□□ -0.75
CBWD3-219ENST00000622817 RSPH4AQ5TD94 716 aa10.38□□□□□ -0.75
CBWD3-219ENST00000622817 EFCAB2Q5VUJ9 269 aa10.38□□□□□ -0.75
CBWD3-219ENST00000622817 CHIC2Q9UKJ5 165 aa10.38□□□□□ -0.75
CBWD3-219ENST00000622817 ARAP3Q8WWN8 1544 aa10.38□□□□□ -0.75
CBWD3-219ENST00000622817 PLEKHH2Q8IVE3 1493 aa10.37□□□□□ -0.75
CBWD3-219ENST00000622817 ABCA9Q8IUA7 1624 aa10.37□□□□□ -0.75
CBWD3-219ENST00000622817 TRHP20396 242 aaPredicted RBP10.36□□□□□ -0.75
CBWD3-219ENST00000622817 NAIPQ13075 1403 aa10.36□□□□□ -0.75
CBWD3-219ENST00000622817 ARHGEF5Q12774 1597 aa10.36□□□□□ -0.75
CBWD3-219ENST00000622817 SAMD9LQ8IVG5 1584 aa10.36□□□□□ -0.75
CBWD3-219ENST00000622817 MAPKBP1O60336 1514 aa10.36□□□□□ -0.75
CBWD3-219ENST00000622817 KIAA1107Q9UPP5 1409 aa10.36□□□□□ -0.75
CBWD3-219ENST00000622817 RRP7BPQ9NSQ0 103 aa10.35□□□□□ -0.75
CBWD3-219ENST00000622817 MBD5Q9P267 1494 aa10.35□□□□□ -0.75
CBWD3-219ENST00000622817 SHANK2Q9UPX8 1470 aa10.35□□□□□ -0.75
CBWD3-219ENST00000622817 TSPY4P0CV99 314 aa10.34□□□□□ -0.75
CBWD3-219ENST00000622817 TSPY10P0CW01 314 aa10.34□□□□□ -0.75
CBWD3-219ENST00000622817 HNRNPMP52272 730 aaKnown RBP eCLIP10.34□□□□□ -0.75
CBWD3-219ENST00000622817 DHX57Q6P158 1386 aaKnown RBP10.34□□□□□ -0.75
CBWD3-219ENST00000622817 CLSPNQ9HAW4 1339 aa10.34□□□□□ -0.75
CBWD3-219ENST00000622817 ACIN1Q9UKV3 1341 aaKnown RBP10.34□□□□□ -0.75
CBWD3-219ENST00000622817 CROCC2H7BZ55 1655 aa10.34□□□□□ -0.75
CBWD3-219ENST00000622817 ADGRL2O95490 1459 aa10.33□□□□□ -0.76
CBWD3-219ENST00000622817 CCDC141Q6ZP82 1450 aa10.33□□□□□ -0.76
CBWD3-219ENST00000622817 GCC2Q8IWJ2 1684 aa10.33□□□□□ -0.76
CBWD3-219ENST00000622817 ANKRD30AQ9BXX3 1397 aa10.33□□□□□ -0.76
CBWD3-219ENST00000622817 C9orf84Q5VXU9 1444 aa10.32□□□□□ -0.76
CBWD3-219ENST00000622817 NCOA1Q15788 1441 aa10.32□□□□□ -0.76
CBWD3-219ENST00000622817 SYCP2Q9BX26 1530 aa10.32□□□□□ -0.76
CBWD3-219ENST00000622817 ADGBQ8N7X0 1667 aa10.32□□□□□ -0.76
CBWD3-219ENST00000622817 CD109Q6YHK3 1445 aa10.31□□□□□ -0.76
CBWD3-219ENST00000622817 FANCAO15360 1455 aa10.31□□□□□ -0.76
CBWD3-219ENST00000622817 ABCC1P33527 1531 aa10.31□□□□□ -0.76
CBWD3-219ENST00000622817 ARHGEF12Q9NZN5 1544 aa10.29□□□□□ -0.76
CBWD3-219ENST00000622817 GLI2P10070 1586 aa10.29□□□□□ -0.76
CBWD3-219ENST00000622817 MAST1Q9Y2H9 1570 aa10.28□□□□□ -0.76
CBWD3-219ENST00000622817 CFAP74Q9C0B2 1584 aa10.28□□□□□ -0.76
CBWD3-219ENST00000622817 ABCB7O75027 752 aa10.27□□□□□ -0.76
CBWD3-219ENST00000622817 ADGRL1O94910 1474 aa10.27□□□□□ -0.77
CBWD3-219ENST00000622817 KIF15Q9NS87 1388 aa10.27□□□□□ -0.77
CBWD3-219ENST00000622817 TRAPPC8Q9Y2L5 1435 aa10.26□□□□□ -0.77
CBWD3-219ENST00000622817 KDM6BO15054 1643 aa10.26□□□□□ -0.77
CBWD3-219ENST00000622817 SCAPERQ9BY12 1400 aa10.26□□□□□ -0.77
CBWD3-219ENST00000622817 ANKRD50Q9ULJ7 1429 aa10.26□□□□□ -0.77
CBWD3-219ENST00000622817 FAM69CQ0P6D2 419 aa10.25□□□□□ -0.77
CBWD3-219ENST00000622817 TRIM52Q96A61 297 aa10.25□□□□□ -0.77
CBWD3-219ENST00000622817 NEO1Q92859 1461 aa10.25□□□□□ -0.77
CBWD3-219ENST00000622817 SPAG9O60271 1321 aaKnown RBP10.25□□□□□ -0.77
CBWD3-219ENST00000622817 RTEL1-TNFRSF6BF6WH68 1400 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms