RNA–Protein interactions for RNA: ENST00000622533.4

CHD1L-210, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5

Gene CHD1L, Length 2,937 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-210ENST00000622533 WASHC2AQ641Q2 1341 aa17.86■□□□□ 0.45
CHD1L-210ENST00000622533 CNTLNQ9NXG0 1405 aa17.86■□□□□ 0.45
CHD1L-210ENST00000622533 DENND4BO75064 1496 aaPredicted RBP17.84■□□□□ 0.45
CHD1L-210ENST00000622533 ROCK1Q13464 1354 aa17.83■□□□□ 0.45
CHD1L-210ENST00000622533 MPHOSPH9Q99550 1183 aa17.83■□□□□ 0.44
CHD1L-210ENST00000622533 PBRM1Q86U86 1689 aa17.82■□□□□ 0.44
CHD1L-210ENST00000622533 WDR62O43379 1518 aa17.81■□□□□ 0.44
CHD1L-210ENST00000622533 CCDC184Q52MB2 194 aa17.81■□□□□ 0.44
CHD1L-210ENST00000622533 CCDC136Q96JN2 1154 aa17.81■□□□□ 0.44
CHD1L-210ENST00000622533 CHIC2Q9UKJ5 165 aa17.81■□□□□ 0.44
CHD1L-210ENST00000622533 RTN4Q9NQC3 1192 aaKnown RBP17.8■□□□□ 0.44
CHD1L-210ENST00000622533 NCOA1Q15788 1441 aa17.8■□□□□ 0.44
CHD1L-210ENST00000622533 ADAMTS12P58397 1594 aa17.79■□□□□ 0.44
CHD1L-210ENST00000622533 KDM6BO15054 1643 aa17.78■□□□□ 0.44
CHD1L-210ENST00000622533 IL27Q8NEV9 243 aa17.78■□□□□ 0.44
CHD1L-210ENST00000622533 RPRD2Q5VT52 1461 aaKnown RBP17.77■□□□□ 0.44
CHD1L-210ENST00000622533 CCDC7Q96M83 1385 aa17.77■□□□□ 0.43
CHD1L-210ENST00000622533 L3MBTL2Q969R5 705 aa17.76■□□□□ 0.43
CHD1L-210ENST00000622533 CDK13Q14004 1512 aaKnown RBP17.76■□□□□ 0.43
CHD1L-210ENST00000622533 FAM9BQ8IZU0 186 aa17.75■□□□□ 0.43
CHD1L-210ENST00000622533 DAPK1P53355 1430 aa17.75■□□□□ 0.43
CHD1L-210ENST00000622533 ANKRD30BQ9BXX2 1392 aa17.75■□□□□ 0.43
CHD1L-210ENST00000622533 DNMT1P26358 1616 aaKnown RBP17.74■□□□□ 0.43
CHD1L-210ENST00000622533 RTL5Q5HYW3 569 aaPredicted RBP17.74■□□□□ 0.43
CHD1L-210ENST00000622533 POLR1AO95602 1720 aaPredicted RBP17.73■□□□□ 0.43
CHD1L-210ENST00000622533 PRKRIP1Q9H875 184 aaPredicted RBP17.73■□□□□ 0.43
CHD1L-210ENST00000622533 TEX14Q8IWB6 1497 aa17.72■□□□□ 0.43
CHD1L-210ENST00000622533 ZBED9Q6R2W3 1325 aa17.7■□□□□ 0.42
CHD1L-210ENST00000622533 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.7■□□□□ 0.42
CHD1L-210ENST00000622533 ABCC5O15440 1437 aa17.69■□□□□ 0.42
CHD1L-210ENST00000622533 IPO9Q96P70 1041 aaKnown RBP17.69■□□□□ 0.42
CHD1L-210ENST00000622533 ANP32AP39687 249 aaKnown RBP17.68■□□□□ 0.42
CHD1L-210ENST00000622533 SPATA31E1Q6ZUB1 1445 aa17.68■□□□□ 0.42
CHD1L-210ENST00000622533 ZBTB47Q9UFB7 747 aaPredicted RBP17.67■□□□□ 0.42
CHD1L-210ENST00000622533 MRS2Q9HD23 443 aa17.67■□□□□ 0.42
CHD1L-210ENST00000622533 KIAA0586Q9BVV6 1533 aa17.66■□□□□ 0.42
CHD1L-210ENST00000622533 KIAA0556O60303 1618 aa17.65■□□□□ 0.42
CHD1L-210ENST00000622533 MRC2Q9UBG0 1479 aa17.65■□□□□ 0.42
CHD1L-210ENST00000622533 SLC4A1APQ9BWU0 796 aaKnown RBP17.65■□□□□ 0.42
CHD1L-210ENST00000622533 C11orf95C9JLR9 678 aaPredicted RBP17.64■□□□□ 0.41
CHD1L-210ENST00000622533 RAPGEF6Q8TEU7 1601 aa17.63■□□□□ 0.41
CHD1L-210ENST00000622533 NBPF8Q3BBV2 869 aa17.63■□□□□ 0.41
CHD1L-210ENST00000622533 KIF7Q2M1P5 1343 aa17.63■□□□□ 0.41
CHD1L-210ENST00000622533 FOXD1Q16676 465 aa17.62■□□□□ 0.41
CHD1L-210ENST00000622533 NUP153P49790 1475 aaKnown RBP17.62■□□□□ 0.41
CHD1L-210ENST00000622533 ARID3CA6NKF2 412 aa17.61■□□□□ 0.41
CHD1L-210ENST00000622533 ITSN2Q9NZM3 1697 aa17.61■□□□□ 0.41
CHD1L-210ENST00000622533 ARID4BQ4LE39 1312 aaPredicted RBP17.61■□□□□ 0.41
CHD1L-210ENST00000622533 IFT140Q96RY7 1462 aa17.61■□□□□ 0.41
CHD1L-210ENST00000622533 DISP1Q96F81 1524 aa17.61■□□□□ 0.41
CHD1L-210ENST00000622533 ADGBQ8N7X0 1667 aa17.61■□□□□ 0.41
CHD1L-210ENST00000622533 SENP3-EIF4A1A0A087X0R7 540 aa17.6■□□□□ 0.41
CHD1L-210ENST00000622533 PZPP20742 1482 aa17.58■□□□□ 0.4
CHD1L-210ENST00000622533 NPM2Q86SE8 214 aaKnown RBP17.58■□□□□ 0.4
CHD1L-210ENST00000622533 ADGRL2O95490 1459 aa17.58■□□□□ 0.4
CHD1L-210ENST00000622533 MBD5Q9P267 1494 aa17.58■□□□□ 0.4
CHD1L-210ENST00000622533 TROQ12816 1431 aaPredicted RBP17.57■□□□□ 0.4
CHD1L-210ENST00000622533 CNGB1Q14028 1251 aaPredicted RBP17.57■□□□□ 0.4
CHD1L-210ENST00000622533 LAS1LQ9Y4W2 734 aaKnown RBP17.57■□□□□ 0.4
CHD1L-210ENST00000622533 CAMSAP2Q08AD1 1489 aa17.56■□□□□ 0.4
CHD1L-210ENST00000622533 KIAA1107Q9UPP5 1409 aa17.56■□□□□ 0.4
CHD1L-210ENST00000622533 SMG6Q86US8 1419 aaKnown RBP17.55■□□□□ 0.4
CHD1L-210ENST00000622533 KIF14Q15058 1648 aa17.55■□□□□ 0.4
CHD1L-210ENST00000622533 ADCY10Q96PN6 1610 aa17.54■□□□□ 0.4
CHD1L-210ENST00000622533 ZNF644Q9H582 1327 aaPredicted RBP17.54■□□□□ 0.4
CHD1L-210ENST00000622533 ROCK2O75116 1388 aaKnown RBP17.53■□□□□ 0.4
CHD1L-210ENST00000622533 CROCC2H7BZ55 1655 aa17.53■□□□□ 0.4
CHD1L-210ENST00000622533 CFDP1Q9UEE9 299 aaPredicted RBP17.52■□□□□ 0.4
CHD1L-210ENST00000622533 GRIN2AQ12879 1464 aa17.52■□□□□ 0.39
CHD1L-210ENST00000622533 NEFMP07197 916 aa17.51■□□□□ 0.39
CHD1L-210ENST00000622533 DHX29Q7Z478 1369 aaKnown RBP17.51■□□□□ 0.39
CHD1L-210ENST00000622533 USP47Q96K76 1375 aa17.51■□□□□ 0.39
CHD1L-210ENST00000622533 ANKRD30AQ9BXX3 1397 aa17.51■□□□□ 0.39
CHD1L-210ENST00000622533 GPATCH8Q9UKJ3 1502 aaKnown RBP17.5■□□□□ 0.39
CHD1L-210ENST00000622533 UHRF1BP1Q6BDS2 1440 aa17.49■□□□□ 0.39
CHD1L-210ENST00000622533 KDM5CP41229 1560 aa17.48■□□□□ 0.39
CHD1L-210ENST00000622533 PRG4Q92954 1404 aaPredicted RBP17.48■□□□□ 0.39
CHD1L-210ENST00000622533 NUDCQ9Y266 331 aa17.48■□□□□ 0.39
CHD1L-210ENST00000622533 ZNF608Q9ULD9 1512 aaPredicted RBP17.47■□□□□ 0.39
CHD1L-210ENST00000622533 ARHGEF12Q9NZN5 1544 aa17.47■□□□□ 0.39
CHD1L-210ENST00000622533 RALGAPBQ86X10 1494 aa17.46■□□□□ 0.39
CHD1L-210ENST00000622533 RNF123Q5XPI4 1314 aa17.46■□□□□ 0.39
CHD1L-210ENST00000622533 SHANK2Q9UPX8 1470 aa17.46■□□□□ 0.39
CHD1L-210ENST00000622533 KTN1Q86UP2 1357 aaKnown RBP17.45■□□□□ 0.38
CHD1L-210ENST00000622533 BCORL1Q5H9F3 1711 aa17.45■□□□□ 0.38
CHD1L-210ENST00000622533 PKD2Q13563 968 aa17.44■□□□□ 0.38
CHD1L-210ENST00000622533 ANKRD50Q9ULJ7 1429 aa17.44■□□□□ 0.38
CHD1L-210ENST00000622533 MAGI1Q96QZ7 1491 aaPredicted RBP17.44■□□□□ 0.38
CHD1L-210ENST00000622533 BRPF3Q9ULD4 1205 aa17.43■□□□□ 0.38
CHD1L-210ENST00000622533 CARMIL2Q6F5E8 1435 aa17.43■□□□□ 0.38
CHD1L-210ENST00000622533 EIF4G3O43432 1585 aaKnown RBP17.42■□□□□ 0.38
CHD1L-210ENST00000622533 KDM5DQ9BY66 1539 aa17.42■□□□□ 0.38
CHD1L-210ENST00000622533 KIF15Q9NS87 1388 aa17.41■□□□□ 0.38
CHD1L-210ENST00000622533 UBE2Q2Q8WVN8 375 aa17.41■□□□□ 0.38
CHD1L-210ENST00000622533 EIF5BO60841 1220 aaKnown RBP17.39■□□□□ 0.37
CHD1L-210ENST00000622533 PLB1Q6P1J6 1458 aa17.39■□□□□ 0.37
CHD1L-210ENST00000622533 ZNF326Q5BKZ1 582 aaKnown RBP17.38■□□□□ 0.37
CHD1L-210ENST00000622533 TMC1Q8TDI8 760 aa17.38■□□□□ 0.37
CHD1L-210ENST00000622533 ZNF777Q9ULD5 760 aaPredicted RBP17.38■□□□□ 0.37
CHD1L-210ENST00000622533 SYNJ2O15056 1496 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms