RNA–Protein interactions for RNA: ENST00000621136.4

SYNRG-229, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 4,841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-229ENST00000621136 MTUS2Q5JR59 1369 aa16.35■□□□□ 0.21
SYNRG-229ENST00000621136 ARID3CA6NKF2 412 aa16.35■□□□□ 0.21
SYNRG-229ENST00000621136 ZBED9Q6R2W3 1325 aa16.34■□□□□ 0.21
SYNRG-229ENST00000621136 BECN1Q14457 450 aa16.34■□□□□ 0.21
SYNRG-229ENST00000621136 AKNAQ7Z591 1439 aa16.34■□□□□ 0.21
SYNRG-229ENST00000621136 UACAQ9BZF9 1416 aa16.33■□□□□ 0.2
SYNRG-229ENST00000621136 FRAT1Q92837 279 aaPredicted RBP16.33■□□□□ 0.2
SYNRG-229ENST00000621136 MAP3K1Q13233 1512 aa16.33■□□□□ 0.2
SYNRG-229ENST00000621136 PCF11O94913 1555 aaKnown RBP16.32■□□□□ 0.2
SYNRG-229ENST00000621136 PTPRKQ15262 1439 aa16.32■□□□□ 0.2
SYNRG-229ENST00000621136 AQRO60306 1485 aaKnown RBP eCLIP16.32■□□□□ 0.23e-7■■■■■ 29
SYNRG-229ENST00000621136 PLEKHG5O94827 1062 aa16.32■□□□□ 0.2
SYNRG-229ENST00000621136 FGD6Q6ZV73 1430 aa16.31■□□□□ 0.2
SYNRG-229ENST00000621136 L3MBTL2Q969R5 705 aa16.31■□□□□ 0.2
SYNRG-229ENST00000621136 ZMYND15Q9H091 742 aa16.3■□□□□ 0.2
SYNRG-229ENST00000621136 CNTLNQ9NXG0 1405 aa16.3■□□□□ 0.2
SYNRG-229ENST00000621136 L1TD1Q5T7N2 865 aaKnown RBP16.28■□□□□ 0.2
SYNRG-229ENST00000621136 USP35Q9P2H5 1018 aa16.28■□□□□ 0.2
SYNRG-229ENST00000621136 PDE4AP27815 886 aa16.26■□□□□ 0.19
SYNRG-229ENST00000621136 CCDC7Q96M83 1385 aa16.26■□□□□ 0.19
SYNRG-229ENST00000621136 HFM1A2PYH4 1435 aa16.25■□□□□ 0.19
SYNRG-229ENST00000621136 NAIPQ13075 1403 aa16.25■□□□□ 0.19
SYNRG-229ENST00000621136 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.25■□□□□ 0.19
SYNRG-229ENST00000621136 PTMAP06454 111 aaKnown RBP16.25■□□□□ 0.19
SYNRG-229ENST00000621136 NFKBIBQ15653 356 aa16.25■□□□□ 0.19
SYNRG-229ENST00000621136 FMN1Q68DA7 1419 aa16.23■□□□□ 0.19
SYNRG-229ENST00000621136 NUDCQ9Y266 331 aa16.22■□□□□ 0.19
SYNRG-229ENST00000621136 KIF7Q2M1P5 1343 aa16.21■□□□□ 0.19
SYNRG-229ENST00000621136 MSNP26038 577 aaKnown RBP16.21■□□□□ 0.18
SYNRG-229ENST00000621136 NBPF8Q3BBV2 869 aa16.21■□□□□ 0.18
SYNRG-229ENST00000621136 GOLGA6L3A6NEY3 463 aa16.2■□□□□ 0.18
SYNRG-229ENST00000621136 FAM13BQ9NYF5 915 aa16.2■□□□□ 0.18
SYNRG-229ENST00000621136 TCERG1O14776 1098 aaKnown RBP16.2■□□□□ 0.18
SYNRG-229ENST00000621136 MPHOSPH9Q99550 1183 aa16.2■□□□□ 0.18
SYNRG-229ENST00000621136 PTPN23Q9H3S7 1636 aa16.19■□□□□ 0.18
SYNRG-229ENST00000621136 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.19■□□□□ 0.18
SYNRG-229ENST00000621136 CFTRP13569 1480 aa16.18■□□□□ 0.18
SYNRG-229ENST00000621136 CFAP43Q8NDM7 1665 aa16.18■□□□□ 0.18
SYNRG-229ENST00000621136 FGD5Q6ZNL6 1462 aa16.18■□□□□ 0.18
SYNRG-229ENST00000621136 KDM5BQ9UGL1 1544 aa16.18■□□□□ 0.18
SYNRG-229ENST00000621136 CASKIN1Q8WXD9 1431 aa16.17■□□□□ 0.18
SYNRG-229ENST00000621136 PLCB2Q00722 1185 aa16.17■□□□□ 0.18
SYNRG-229ENST00000621136 FYCO1Q9BQS8 1478 aa16.17■□□□□ 0.18
SYNRG-229ENST00000621136 KDM2AQ9Y2K7 1162 aa16.16■□□□□ 0.18
SYNRG-229ENST00000621136 FRAT2O75474 233 aaPredicted RBP16.16■□□□□ 0.18
SYNRG-229ENST00000621136 NCOA2Q15596 1464 aa16.15■□□□□ 0.18
SYNRG-229ENST00000621136 MYH16Q9H6N6 1097 aa16.15■□□□□ 0.18
SYNRG-229ENST00000621136 NCOA1Q15788 1441 aa16.15■□□□□ 0.18
SYNRG-229ENST00000621136 EXOC6Q8TAG9 804 aa16.14■□□□□ 0.17
SYNRG-229ENST00000621136 SMG6Q86US8 1419 aaKnown RBP16.13■□□□□ 0.17
SYNRG-229ENST00000621136 PLIN1O60240 522 aa16.13■□□□□ 0.17
SYNRG-229ENST00000621136 MYOM3Q5VTT5 1437 aa16.12■□□□□ 0.17
SYNRG-229ENST00000621136 RBM10P98175 930 aaKnown RBP16.12■□□□□ 0.17
SYNRG-229ENST00000621136 MAPK8IP2Q13387 824 aaPredicted RBP16.12■□□□□ 0.17
SYNRG-229ENST00000621136 SKAP1Q86WV1 359 aa16.11■□□□□ 0.17
SYNRG-229ENST00000621136 WDR43Q15061 677 aaKnown RBP eCLIP16.1■□□□□ 0.17
SYNRG-229ENST00000621136 NCAPD3P42695 1498 aa16.1■□□□□ 0.17
SYNRG-229ENST00000621136 GOLGA6L22H0YM25 854 aa16.08■□□□□ 0.16
SYNRG-229ENST00000621136 RAD54L2Q9Y4B4 1467 aa16.08■□□□□ 0.16
SYNRG-229ENST00000621136 RCAN3Q9UKA8 241 aa16.08■□□□□ 0.16
SYNRG-229ENST00000621136 DENND4BO75064 1496 aaPredicted RBP16.04■□□□□ 0.16
SYNRG-229ENST00000621136 FOXD4L1Q9NU39 408 aa16.04■□□□□ 0.16
SYNRG-229ENST00000621136 RNF123Q5XPI4 1314 aa16.04■□□□□ 0.16
SYNRG-229ENST00000621136 FAM43AQ8N2R8 423 aa16.04■□□□□ 0.16
SYNRG-229ENST00000621136 RRP1P56182 461 aaKnown RBP16.03■□□□□ 0.16
SYNRG-229ENST00000621136 PNISRQ8TF01 805 aaKnown RBP16.03■□□□□ 0.16
SYNRG-229ENST00000621136 NEUROD2Q15784 382 aa16.03■□□□□ 0.16
SYNRG-229ENST00000621136 CADPSQ9ULU8 1353 aa16.01■□□□□ 0.15
SYNRG-229ENST00000621136 HMGXB3Q12766 1538 aa16.01■□□□□ 0.15
SYNRG-229ENST00000621136 HSP90AB1P08238 724 aaKnown RBP16.01■□□□□ 0.15
SYNRG-229ENST00000621136 BACH2Q9BYV9 841 aa16■□□□□ 0.15
SYNRG-229ENST00000621136 KDM6BO15054 1643 aa16■□□□□ 0.15
SYNRG-229ENST00000621136 SNAPC4Q5SXM2 1469 aa15.99■□□□□ 0.15
SYNRG-229ENST00000621136 EFCAB5A4FU69 1503 aa15.99■□□□□ 0.15
SYNRG-229ENST00000621136 SLC24A1O60721 1099 aa15.99■□□□□ 0.15
SYNRG-229ENST00000621136 ZNF777Q9ULD5 760 aaPredicted RBP15.98■□□□□ 0.15
SYNRG-229ENST00000621136 DHX29Q7Z478 1369 aaKnown RBP15.98■□□□□ 0.15
SYNRG-229ENST00000621136 CC2D1BQ5T0F9 858 aaKnown RBP15.97■□□□□ 0.15
SYNRG-229ENST00000621136 USP47Q96K76 1375 aa15.97■□□□□ 0.15
SYNRG-229ENST00000621136 ANKRD30BQ9BXX2 1392 aa15.96■□□□□ 0.15
SYNRG-229ENST00000621136 CDCA7LQ96GN5 454 aa15.96■□□□□ 0.14
SYNRG-229ENST00000621136 PRDM10Q9NQV6 1147 aa15.96■□□□□ 0.14
SYNRG-229ENST00000621136 ZNF644Q9H582 1327 aaPredicted RBP15.95■□□□□ 0.14
SYNRG-229ENST00000621136 TDRD9Q8NDG6 1382 aaKnown RBP15.95■□□□□ 0.14
SYNRG-229ENST00000621136 SPATA31E1Q6ZUB1 1445 aa15.94■□□□□ 0.14
SYNRG-229ENST00000621136 HSCBQ8IWL3 235 aa15.94■□□□□ 0.14
SYNRG-229ENST00000621136 POGKQ9P215 609 aa15.93■□□□□ 0.14
SYNRG-229ENST00000621136 R3HCC1Q9Y3T6 440 aaKnown RBP15.93■□□□□ 0.14
SYNRG-229ENST00000621136 RRP9O43818 475 aaKnown RBP15.92■□□□□ 0.14
SYNRG-229ENST00000621136 RPRD2Q5VT52 1461 aaKnown RBP15.92■□□□□ 0.14
SYNRG-229ENST00000621136 PDE4CQ08493 712 aa15.92■□□□□ 0.14
SYNRG-229ENST00000621136 CARD11Q9BXL7 1154 aa15.92■□□□□ 0.14
SYNRG-229ENST00000621136 SUPT6HQ7KZ85 1726 aaKnown RBP15.92■□□□□ 0.14
SYNRG-229ENST00000621136 ZHX1Q9UKY1 873 aaPredicted RBP15.91■□□□□ 0.14
SYNRG-229ENST00000621136 MFAP1P55081 439 aaKnown RBP15.91■□□□□ 0.14
SYNRG-229ENST00000621136 BCL11BQ9C0K0 894 aaPredicted RBP15.9■□□□□ 0.14
SYNRG-229ENST00000621136 WASHC2CQ9Y4E1 1318 aa15.9■□□□□ 0.14
SYNRG-229ENST00000621136 TNNT3P45378 269 aaPredicted RBP15.9■□□□□ 0.14
SYNRG-229ENST00000621136 CRBNQ96SW2 442 aa15.9■□□□□ 0.14
SYNRG-229ENST00000621136 TEX14Q8IWB6 1497 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 227.9 ms