RNA–Protein interactions for RNA: ENST00000619804.1

CPS1-212, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 5 BASIC

Gene CPS1, Length 1,542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-212ENST00000619804 UACAQ9BZF9 1416 aa9.58□□□□□ -0.88
CPS1-212ENST00000619804 MTUS2Q5JR59 1369 aa9.57□□□□□ -0.88
CPS1-212ENST00000619804 NPM1P06748 294 aaKnown RBP eCLIP9.57□□□□□ -0.88
CPS1-212ENST00000619804 TRIM26Q12899 539 aaPredicted RBP9.57□□□□□ -0.88
CPS1-212ENST00000619804 PLEKHD1A6NEE1 506 aa9.56□□□□□ -0.88
CPS1-212ENST00000619804 EPRSP07814 1512 aaKnown RBP9.56□□□□□ -0.88
CPS1-212ENST00000619804 ABCA8O94911 1581 aa9.55□□□□□ -0.88
CPS1-212ENST00000619804 PLCD3Q8N3E9 789 aa9.55□□□□□ -0.88
CPS1-212ENST00000619804 SPDYE1Q8NFV5 336 aaPredicted RBP9.55□□□□□ -0.88
CPS1-212ENST00000619804 LRRC9Q6ZRR7 1453 aa9.54□□□□□ -0.88
CPS1-212ENST00000619804 SUPT6HQ7KZ85 1726 aaKnown RBP9.54□□□□□ -0.88
CPS1-212ENST00000619804 EHBP1L1Q8N3D4 1523 aa9.53□□□□□ -0.88
CPS1-212ENST00000619804 ABCC2Q92887 1545 aa9.53□□□□□ -0.88
CPS1-212ENST00000619804 UHRF1BP1LA0JNW5 1464 aa9.53□□□□□ -0.88
CPS1-212ENST00000619804 PLB1Q6P1J6 1458 aa9.53□□□□□ -0.88
CPS1-212ENST00000619804 REM2Q8IYK8 340 aaPredicted RBP9.53□□□□□ -0.88
CPS1-212ENST00000619804 MIER1Q8N108 512 aa9.52□□□□□ -0.88
CPS1-212ENST00000619804 NUP153P49790 1475 aaKnown RBP9.52□□□□□ -0.89
CPS1-212ENST00000619804 ERCC6L2Q5T890 1561 aa9.52□□□□□ -0.89
CPS1-212ENST00000619804 PPARGC1BQ86YN6 1023 aaKnown RBP9.51□□□□□ -0.89
CPS1-212ENST00000619804 LRRIQ1Q96JM4 1722 aa9.51□□□□□ -0.89
CPS1-212ENST00000619804 ARHGEF11O15085 1522 aa9.51□□□□□ -0.89
CPS1-212ENST00000619804 KLHL34Q8N239 644 aa9.51□□□□□ -0.89
CPS1-212ENST00000619804 CLEC11AQ9Y240 323 aa9.5□□□□□ -0.89
CPS1-212ENST00000619804 PLEKHG5O94827 1062 aa9.49□□□□□ -0.89
CPS1-212ENST00000619804 KANK4Q5T7N3 995 aaPredicted RBP9.49□□□□□ -0.89
CPS1-212ENST00000619804 ATP10BO94823 1461 aa9.48□□□□□ -0.89
CPS1-212ENST00000619804 ARID3CA6NKF2 412 aa9.48□□□□□ -0.89
CPS1-212ENST00000619804 CDK13Q14004 1512 aaKnown RBP9.48□□□□□ -0.89
CPS1-212ENST00000619804 TROQ12816 1431 aaPredicted RBP9.48□□□□□ -0.89
CPS1-212ENST00000619804 RIMBP3CA6NJZ7 1639 aa9.47□□□□□ -0.89
CPS1-212ENST00000619804 RIMBP3BA6NNM3 1639 aa9.47□□□□□ -0.89
CPS1-212ENST00000619804 RIMBP3Q9UFD9 1639 aa9.47□□□□□ -0.89
CPS1-212ENST00000619804 KDM5BQ9UGL1 1544 aa9.47□□□□□ -0.89
CPS1-212ENST00000619804 KIF14Q15058 1648 aa9.47□□□□□ -0.89
CPS1-212ENST00000619804 ZCCHC11Q5TAX3 1644 aaKnown RBP9.46□□□□□ -0.9
CPS1-212ENST00000619804 ITSN2Q9NZM3 1697 aa9.46□□□□□ -0.9
CPS1-212ENST00000619804 SPOCK2Q92563 424 aa9.46□□□□□ -0.9
CPS1-212ENST00000619804 CCNB3Q8WWL7 1395 aa9.45□□□□□ -0.9
CPS1-212ENST00000619804 CYB5RLQ6IPT4 315 aa9.45□□□□□ -0.9
CPS1-212ENST00000619804 PCGF6Q9BYE7 350 aa9.45□□□□□ -0.9
CPS1-212ENST00000619804 ADCY10Q96PN6 1610 aa9.45□□□□□ -0.9
CPS1-212ENST00000619804 NCOA2Q15596 1464 aa9.45□□□□□ -0.9
CPS1-212ENST00000619804 PRR29P0C7W0 189 aa9.44□□□□□ -0.9
CPS1-212ENST00000619804 ZBTB47Q9UFB7 747 aaPredicted RBP9.44□□□□□ -0.9
CPS1-212ENST00000619804 PITPNM1O00562 1244 aa9.43□□□□□ -0.9
CPS1-212ENST00000619804 MYOM3Q5VTT5 1437 aa9.43□□□□□ -0.9
CPS1-212ENST00000619804 MIA2Q96PC5 1412 aa9.43□□□□□ -0.9
CPS1-212ENST00000619804 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.41□□□□□ -0.9
CPS1-212ENST00000619804 RRBP1Q9P2E9 1410 aaKnown RBP9.41□□□□□ -0.9
CPS1-212ENST00000619804 FAM50AQ14320 339 aaKnown RBP9.41□□□□□ -0.9
CPS1-212ENST00000619804 KCNH8Q96L42 1107 aa9.41□□□□□ -0.9
CPS1-212ENST00000619804 CFDP1Q9UEE9 299 aaPredicted RBP9.4□□□□□ -0.91
CPS1-212ENST00000619804 WDR7Q9Y4E6 1490 aa9.4□□□□□ -0.91
CPS1-212ENST00000619804 MAGI3Q5TCQ9 1506 aa9.39□□□□□ -0.91
CPS1-212ENST00000619804 MYO5CQ9NQX4 1742 aa9.39□□□□□ -0.91
CPS1-212ENST00000619804 FGD6Q6ZV73 1430 aa9.39□□□□□ -0.91
CPS1-212ENST00000619804 RSPH4AQ5TD94 716 aa9.38□□□□□ -0.91
CPS1-212ENST00000619804 PHLDB1Q86UU1 1377 aa9.38□□□□□ -0.91
CPS1-212ENST00000619804 ACIN1Q9UKV3 1341 aaKnown RBP9.38□□□□□ -0.91
CPS1-212ENST00000619804 PTPN23Q9H3S7 1636 aa9.37□□□□□ -0.91
CPS1-212ENST00000619804 ASXL2Q76L83 1435 aa9.37□□□□□ -0.91
CPS1-212ENST00000619804 MAPKBP1O60336 1514 aa9.37□□□□□ -0.91
CPS1-212ENST00000619804 CDC42BPAQ5VT25 1732 aa9.36□□□□□ -0.91
CPS1-212ENST00000619804 EFCAB2Q5VUJ9 269 aa9.36□□□□□ -0.91
CPS1-212ENST00000619804 PLEKHH2Q8IVE3 1493 aa9.35□□□□□ -0.91
CPS1-212ENST00000619804 PREX2Q70Z35 1606 aa9.35□□□□□ -0.91
CPS1-212ENST00000619804 CREBZFQ9NS37 354 aa9.35□□□□□ -0.91
CPS1-212ENST00000619804 ZNF777Q9ULD5 760 aaPredicted RBP9.35□□□□□ -0.91
CPS1-212ENST00000619804 GPATCH8Q9UKJ3 1502 aaKnown RBP9.35□□□□□ -0.91
CPS1-212ENST00000619804 ABCC10Q5T3U5 1492 aa9.34□□□□□ -0.91
CPS1-212ENST00000619804 ABCA9Q8IUA7 1624 aa9.34□□□□□ -0.91
CPS1-212ENST00000619804 PKD2Q13563 968 aa9.34□□□□□ -0.91
CPS1-212ENST00000619804 ARHGAP5Q13017 1502 aa9.34□□□□□ -0.91
CPS1-212ENST00000619804 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.34□□□□□ -0.91
CPS1-212ENST00000619804 ARAP3Q8WWN8 1544 aa9.34□□□□□ -0.91
CPS1-212ENST00000619804 TCOF1Q13428 1488 aaKnown RBP9.34□□□□□ -0.91
CPS1-212ENST00000619804 CFAP74Q9C0B2 1584 aa9.33□□□□□ -0.92
CPS1-212ENST00000619804 TSPY4P0CV99 314 aa9.33□□□□□ -0.92
CPS1-212ENST00000619804 TSPY10P0CW01 314 aa9.33□□□□□ -0.92
CPS1-212ENST00000619804 ITGAEP38570 1179 aa9.33□□□□□ -0.92
CPS1-212ENST00000619804 DNAJC5Q9H3Z4 198 aa9.33□□□□□ -0.92
CPS1-212ENST00000619804 PLCH2O75038 1416 aa9.33□□□□□ -0.92
CPS1-212ENST00000619804 CDC42BPBQ9Y5S2 1711 aa9.32□□□□□ -0.92
CPS1-212ENST00000619804 TTC37Q6PGP7 1564 aa9.31□□□□□ -0.92
CPS1-212ENST00000619804 CAMSAP2Q08AD1 1489 aa9.3□□□□□ -0.92
CPS1-212ENST00000619804 GLI2P10070 1586 aa9.3□□□□□ -0.92
CPS1-212ENST00000619804 CD109Q6YHK3 1445 aa9.3□□□□□ -0.92
CPS1-212ENST00000619804 KIAA1107Q9UPP5 1409 aa9.29□□□□□ -0.92
CPS1-212ENST00000619804 DNMT1P26358 1616 aaKnown RBP9.29□□□□□ -0.92
CPS1-212ENST00000619804 FAM69CQ0P6D2 419 aa9.28□□□□□ -0.92
CPS1-212ENST00000619804 FANCAO15360 1455 aa9.28□□□□□ -0.92
CPS1-212ENST00000619804 ARHGEF5Q12774 1597 aa9.28□□□□□ -0.92
CPS1-212ENST00000619804 TEX14Q8IWB6 1497 aa9.27□□□□□ -0.93
CPS1-212ENST00000619804 ECM2O94769 699 aaPredicted RBP9.27□□□□□ -0.93
CPS1-212ENST00000619804 HRCP23327 699 aa9.27□□□□□ -0.93
CPS1-212ENST00000619804 MNX1P50219 401 aaPredicted RBP9.27□□□□□ -0.93
CPS1-212ENST00000619804 CIZ1Q9ULV3 898 aaPredicted RBP9.27□□□□□ -0.93
CPS1-212ENST00000619804 DAPK1P53355 1430 aa9.27□□□□□ -0.93
CPS1-212ENST00000619804 ADGBQ8N7X0 1667 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms