RNA–Protein interactions for RNA: ENST00000619747.1

LAPTM4B-204, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 2,758 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-204ENST00000619747 TONSLQ96HA7 1378 aa27.68■■■□□ 2.02
LAPTM4B-204ENST00000619747 PRKCSHP14314 528 aaPredicted RBP27.68■■■□□ 2.02
LAPTM4B-204ENST00000619747 KDM6BO15054 1643 aa27.66■■■□□ 2.02
LAPTM4B-204ENST00000619747 PTPRGP23470 1445 aa27.63■■■□□ 2.01
LAPTM4B-204ENST00000619747 DAPK1P53355 1430 aa27.63■■■□□ 2.01
LAPTM4B-204ENST00000619747 ABCC5O15440 1437 aa27.63■■■□□ 2.01
LAPTM4B-204ENST00000619747 KIF14Q15058 1648 aa27.62■■■□□ 2.01
LAPTM4B-204ENST00000619747 MPHOSPH9Q99550 1183 aa27.61■■■□□ 2.01
LAPTM4B-204ENST00000619747 TIMELESSQ9UNS1 1208 aa27.6■■■□□ 2.01
LAPTM4B-204ENST00000619747 ATP10BO94823 1461 aa27.6■■■□□ 2.01
LAPTM4B-204ENST00000619747 GPATCH8Q9UKJ3 1502 aaKnown RBP27.58■■■□□ 2.01
LAPTM4B-204ENST00000619747 CHD1O14646 1710 aa27.58■■■□□ 2
LAPTM4B-204ENST00000619747 DDX10Q13206 875 aaKnown RBP27.57■■■□□ 2
LAPTM4B-204ENST00000619747 ABCA8O94911 1581 aa27.53■■■□□ 2
LAPTM4B-204ENST00000619747 CAMSAP2Q08AD1 1489 aa27.53■■■□□ 2
LAPTM4B-204ENST00000619747 DENND4BO75064 1496 aaPredicted RBP27.52■■■□□ 2
LAPTM4B-204ENST00000619747 GCC2Q8IWJ2 1684 aa27.5■■□□□ 1.99
LAPTM4B-204ENST00000619747 SLC4A1APQ9BWU0 796 aaKnown RBP27.49■■□□□ 1.99
LAPTM4B-204ENST00000619747 DNMT1P26358 1616 aaKnown RBP27.48■■□□□ 1.99
LAPTM4B-204ENST00000619747 AKNAQ7Z591 1439 aa27.48■■□□□ 1.99
LAPTM4B-204ENST00000619747 HNRNPMP52272 730 aaKnown RBP eCLIP27.46■■□□□ 1.993e-6■■■■□ 24.7
LAPTM4B-204ENST00000619747 ERCC6L2Q5T890 1561 aa27.45■■□□□ 1.99
LAPTM4B-204ENST00000619747 ROCK1Q13464 1354 aa27.45■■□□□ 1.98
LAPTM4B-204ENST00000619747 KCNH8Q96L42 1107 aa27.43■■□□□ 1.98
LAPTM4B-204ENST00000619747 NCOA1Q15788 1441 aa27.4■■□□□ 1.98
LAPTM4B-204ENST00000619747 L3MBTL2Q969R5 705 aa27.39■■□□□ 1.97
LAPTM4B-204ENST00000619747 ITSN2Q9NZM3 1697 aa27.38■■□□□ 1.97
LAPTM4B-204ENST00000619747 TSHZ2Q9NRE2 1034 aa27.38■■□□□ 1.97
LAPTM4B-204ENST00000619747 ABCC10Q5T3U5 1492 aa27.36■■□□□ 1.97
LAPTM4B-204ENST00000619747 ADCY10Q96PN6 1610 aa27.36■■□□□ 1.97
LAPTM4B-204ENST00000619747 TSPY4P0CV99 314 aa27.36■■□□□ 1.97
LAPTM4B-204ENST00000619747 TSPY10P0CW01 314 aa27.36■■□□□ 1.97
LAPTM4B-204ENST00000619747 CDC42BPAQ5VT25 1732 aa27.33■■□□□ 1.97
LAPTM4B-204ENST00000619747 ANKRD30AQ9BXX3 1397 aa27.32■■□□□ 1.96
LAPTM4B-204ENST00000619747 ANKRD30BQ9BXX2 1392 aa27.29■■□□□ 1.96
LAPTM4B-204ENST00000619747 KDM5BQ9UGL1 1544 aa27.29■■□□□ 1.96
LAPTM4B-204ENST00000619747 SUPT16HQ9Y5B9 1047 aaKnown RBP27.29■■□□□ 1.96
LAPTM4B-204ENST00000619747 PKD2Q13563 968 aa27.27■■□□□ 1.96
LAPTM4B-204ENST00000619747 ANKRD50Q9ULJ7 1429 aa27.26■■□□□ 1.95
LAPTM4B-204ENST00000619747 C9orf84Q5VXU9 1444 aa27.26■■□□□ 1.95
LAPTM4B-204ENST00000619747 SHROOM2Q13796 1616 aa27.24■■□□□ 1.95
LAPTM4B-204ENST00000619747 HSPA5P11021 654 aaKnown RBP27.22■■□□□ 1.95
LAPTM4B-204ENST00000619747 PZPP20742 1482 aa27.21■■□□□ 1.95
LAPTM4B-204ENST00000619747 NBPF8Q3BBV2 869 aa27.21■■□□□ 1.95
LAPTM4B-204ENST00000619747 NUP155O75694 1391 aa27.21■■□□□ 1.95
LAPTM4B-204ENST00000619747 ZNF326Q5BKZ1 582 aaKnown RBP27.2■■□□□ 1.95
LAPTM4B-204ENST00000619747 ADGRL2O95490 1459 aa27.18■■□□□ 1.94
LAPTM4B-204ENST00000619747 KIF15Q9NS87 1388 aa27.17■■□□□ 1.94
LAPTM4B-204ENST00000619747 ADGBQ8N7X0 1667 aa27.16■■□□□ 1.94
LAPTM4B-204ENST00000619747 CROCC2H7BZ55 1655 aa27.16■■□□□ 1.94
LAPTM4B-204ENST00000619747 ABCC2Q92887 1545 aa27.15■■□□□ 1.94
LAPTM4B-204ENST00000619747 RPRD2Q5VT52 1461 aaKnown RBP27.15■■□□□ 1.94
LAPTM4B-204ENST00000619747 MBD5Q9P267 1494 aa27.15■■□□□ 1.94
LAPTM4B-204ENST00000619747 EIF4G2P78344 907 aaKnown RBP eCLIP27.14■■□□□ 1.94
LAPTM4B-204ENST00000619747 ARHGAP5Q13017 1502 aa27.14■■□□□ 1.93
LAPTM4B-204ENST00000619747 CDC42BPBQ9Y5S2 1711 aa27.13■■□□□ 1.93
LAPTM4B-204ENST00000619747 TTC37Q6PGP7 1564 aa27.13■■□□□ 1.93
LAPTM4B-204ENST00000619747 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.12■■□□□ 1.93
LAPTM4B-204ENST00000619747 SAMD9LQ8IVG5 1584 aa27.12■■□□□ 1.93
LAPTM4B-204ENST00000619747 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.11■■□□□ 1.931e-8■■□□□ 11.6
LAPTM4B-204ENST00000619747 ANP32CO43423 234 aa27.11■■□□□ 1.93
LAPTM4B-204ENST00000619747 CLASP1Q7Z460 1538 aa27.1■■□□□ 1.93
LAPTM4B-204ENST00000619747 KIAA1107Q9UPP5 1409 aa27.09■■□□□ 1.93
LAPTM4B-204ENST00000619747 WASHC2AQ641Q2 1341 aa27.08■■□□□ 1.92
LAPTM4B-204ENST00000619747 SYCP2Q9BX26 1530 aa27.07■■□□□ 1.92
LAPTM4B-204ENST00000619747 CCDC141Q6ZP82 1450 aa27.06■■□□□ 1.92
LAPTM4B-204ENST00000619747 PREX2Q70Z35 1606 aa27.05■■□□□ 1.92
LAPTM4B-204ENST00000619747 SHANK2Q9UPX8 1470 aa27.05■■□□□ 1.92
LAPTM4B-204ENST00000619747 C11orf95C9JLR9 678 aaPredicted RBP27.05■■□□□ 1.92
LAPTM4B-204ENST00000619747 TEX14Q8IWB6 1497 aa27.05■■□□□ 1.92
LAPTM4B-204ENST00000619747 KDM2AQ9Y2K7 1162 aa27.03■■□□□ 1.92
LAPTM4B-204ENST00000619747 RSPH4AQ5TD94 716 aa27.02■■□□□ 1.92
LAPTM4B-204ENST00000619747 ZCCHC11Q5TAX3 1644 aaKnown RBP26.99■■□□□ 1.91
LAPTM4B-204ENST00000619747 ARHGEF5Q12774 1597 aa26.98■■□□□ 1.91
LAPTM4B-204ENST00000619747 EFCAB2Q5VUJ9 269 aa26.98■■□□□ 1.91
LAPTM4B-204ENST00000619747 POLR3GLQ9BT43 218 aa26.95■■□□□ 1.91
LAPTM4B-204ENST00000619747 ARHGEF12Q9NZN5 1544 aa26.95■■□□□ 1.9
LAPTM4B-204ENST00000619747 AFAP1Q8N556 730 aa26.94■■□□□ 1.9
LAPTM4B-204ENST00000619747 CNGB1Q14028 1251 aaPredicted RBP26.92■■□□□ 1.9
LAPTM4B-204ENST00000619747 PLCH2O75038 1416 aa26.92■■□□□ 1.9
LAPTM4B-204ENST00000619747 MYO5CQ9NQX4 1742 aa26.92■■□□□ 1.9
LAPTM4B-204ENST00000619747 RGL3Q3MIN7 710 aa26.92■■□□□ 1.9
LAPTM4B-204ENST00000619747 DCAF11Q8TEB1 546 aa26.91■■□□□ 1.9
LAPTM4B-204ENST00000619747 UHRF1BP1LA0JNW5 1464 aa26.89■■□□□ 1.89
LAPTM4B-204ENST00000619747 PLEKHH2Q8IVE3 1493 aa26.89■■□□□ 1.89
LAPTM4B-204ENST00000619747 MYT1LQ9UL68 1186 aa26.89■■□□□ 1.89
LAPTM4B-204ENST00000619747 ERICH6Q7L0X2 663 aa26.88■■□□□ 1.89
LAPTM4B-204ENST00000619747 OSCARQ8IYS5 282 aa26.87■■□□□ 1.89
LAPTM4B-204ENST00000619747 TRAPPC8Q9Y2L5 1435 aa26.87■■□□□ 1.89
LAPTM4B-204ENST00000619747 CCER2I3L3R5 266 aa26.86■■□□□ 1.89
LAPTM4B-204ENST00000619747 CCDC7Q96M83 1385 aa26.84■■□□□ 1.89
LAPTM4B-204ENST00000619747 FAM135AQ9P2D6 1515 aa26.84■■□□□ 1.89
LAPTM4B-204ENST00000619747 KIF7Q2M1P5 1343 aa26.82■■□□□ 1.88
LAPTM4B-204ENST00000619747 SPAG9O60271 1321 aaKnown RBP26.81■■□□□ 1.88
LAPTM4B-204ENST00000619747 CARD11Q9BXL7 1154 aa26.8■■□□□ 1.88
LAPTM4B-204ENST00000619747 SPATA31E1Q6ZUB1 1445 aa26.79■■□□□ 1.88
LAPTM4B-204ENST00000619747 USP47Q96K76 1375 aa26.79■■□□□ 1.88
LAPTM4B-204ENST00000619747 KDM5DQ9BY66 1539 aa26.77■■□□□ 1.88
LAPTM4B-204ENST00000619747 WDR7Q9Y4E6 1490 aa26.76■■□□□ 1.87
LAPTM4B-204ENST00000619747 CCDC184Q52MB2 194 aa26.75■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms