RNA–Protein interactions for RNA: ENST00000618972.4

NEB-220, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-220ENST00000618972 UBE2Q2Q8WVN8 375 aa3.98□□□□□ -1.77
NEB-220ENST00000618972 TAF3Q5VWG9 929 aa3.98□□□□□ -1.77
NEB-220ENST00000618972 C14orf37Q86TY3 774 aa3.97□□□□□ -1.77
NEB-220ENST00000618972 PKD2Q13563 968 aa3.97□□□□□ -1.77
NEB-220ENST00000618972 ADAMTS8Q9UP79 889 aa3.97□□□□□ -1.77
NEB-220ENST00000618972 HSP90B1P14625 803 aaKnown RBP3.97□□□□□ -1.77
NEB-220ENST00000618972 FANCIQ9NVI1 1328 aa3.97□□□□□ -1.77
NEB-220ENST00000618972 BCAR3O75815 825 aa3.97□□□□□ -1.77
NEB-220ENST00000618972 ST20-MTHFSA0A0A6YYL1 179 aa3.97□□□□□ -1.77
NEB-220ENST00000618972 PANK1Q8TE04 598 aa3.97□□□□□ -1.77
NEB-220ENST00000618972 PDE4CQ08493 712 aa3.97□□□□□ -1.77
NEB-220ENST00000618972 FOXD4L5Q5VV16 416 aaPredicted RBP3.96□□□□□ -1.77
NEB-220ENST00000618972 FOXD4L4Q8WXT5 416 aaPredicted RBP3.96□□□□□ -1.77
NEB-220ENST00000618972 SPINK5Q9NQ38 1064 aaPredicted RBP3.96□□□□□ -1.77
NEB-220ENST00000618972 NUTM2DQ5VT03 806 aaPredicted RBP3.96□□□□□ -1.78
NEB-220ENST00000618972 CHAF1AQ13111 956 aaPredicted RBP3.96□□□□□ -1.78
NEB-220ENST00000618972 HNRNPMP52272 730 aaKnown RBP eCLIP3.96□□□□□ -1.78
NEB-220ENST00000618972 PKNOX2Q96KN3 472 aa3.96□□□□□ -1.78
NEB-220ENST00000618972 DMRT2Q9Y5R5 561 aa3.96□□□□□ -1.78
NEB-220ENST00000618972 BCCIPQ9P287 314 aaKnown RBP eCLIP3.95□□□□□ -1.78
NEB-220ENST00000618972 NRDCO43847 1150 aa3.95□□□□□ -1.78
NEB-220ENST00000618972 CLUAP1Q96AJ1 413 aa3.95□□□□□ -1.78
NEB-220ENST00000618972 APPP05067 770 aa3.95□□□□□ -1.78
NEB-220ENST00000618972 SKOR2Q2VWA4 1001 aaPredicted RBP3.95□□□□□ -1.78
NEB-220ENST00000618972 NFKBIBQ15653 356 aa3.95□□□□□ -1.78
NEB-220ENST00000618972 CHAMP1Q96JM3 812 aa3.95□□□□□ -1.78
NEB-220ENST00000618972 MS4A1P11836 297 aa3.95□□□□□ -1.78
NEB-220ENST00000618972 APAF1O14727 1248 aa3.95□□□□□ -1.78
NEB-220ENST00000618972 CCDC88BA6NC98 1476 aa3.94□□□□□ -1.78
NEB-220ENST00000618972 BCL11BQ9C0K0 894 aaPredicted RBP3.94□□□□□ -1.78
NEB-220ENST00000618972 DNTTIP2Q5QJE6 756 aaKnown RBP3.94□□□□□ -1.78
NEB-220ENST00000618972 ZNF428Q96B54 188 aa3.94□□□□□ -1.78
NEB-220ENST00000618972 CHMP4CQ96CF2 233 aa3.94□□□□□ -1.78
NEB-220ENST00000618972 RAB3GAP2Q9H2M9 1393 aa3.93□□□□□ -1.78
NEB-220ENST00000618972 BCL2L13Q9BXK5 485 aa3.93□□□□□ -1.78
NEB-220ENST00000618972 BACH2Q9BYV9 841 aa3.93□□□□□ -1.78
NEB-220ENST00000618972 RRAGDQ9NQL2 400 aaPredicted RBP3.93□□□□□ -1.78
NEB-220ENST00000618972 POGKQ9P215 609 aa3.93□□□□□ -1.78
NEB-220ENST00000618972 ELL2O00472 640 aaPredicted RBP3.93□□□□□ -1.78
NEB-220ENST00000618972 CHGAP10645 457 aaKnown RBP3.93□□□□□ -1.78
NEB-220ENST00000618972 COG6Q9Y2V7 657 aa3.93□□□□□ -1.78
NEB-220ENST00000618972 CSPP1Q1MSJ5 1256 aa3.92□□□□□ -1.78
NEB-220ENST00000618972 IGF1RP08069 1367 aa3.92□□□□□ -1.78
NEB-220ENST00000618972 JARID2Q92833 1246 aaPredicted RBP3.92□□□□□ -1.78
NEB-220ENST00000618972 CARD11Q9BXL7 1154 aa3.92□□□□□ -1.78
NEB-220ENST00000618972 MYH16Q9H6N6 1097 aa3.92□□□□□ -1.78
NEB-220ENST00000618972 GOLGA6L6A8MZA4 724 aa3.92□□□□□ -1.78
NEB-220ENST00000618972 SLKQ9H2G2 1235 aaPredicted RBP3.92□□□□□ -1.78
NEB-220ENST00000618972 SETQ01105 290 aaPredicted RBP3.92□□□□□ -1.78
NEB-220ENST00000618972 KIAA2012Q0VF49 1180 aa3.92□□□□□ -1.78
NEB-220ENST00000618972 NOM1Q5C9Z4 860 aaKnown RBP3.92□□□□□ -1.78
NEB-220ENST00000618972 KIF7Q2M1P5 1343 aa3.92□□□□□ -1.78
NEB-220ENST00000618972 HTATSF1O43719 755 aaKnown RBP3.92□□□□□ -1.78
NEB-220ENST00000618972 CLIP1P30622 1438 aa3.92□□□□□ -1.78
NEB-220ENST00000618972 KLHL34Q8N239 644 aa3.92□□□□□ -1.78
NEB-220ENST00000618972 VSIG10Q8N0Z9 540 aa3.92□□□□□ -1.78
NEB-220ENST00000618972 GSE1Q14687 1217 aa3.91□□□□□ -1.78
NEB-220ENST00000618972 RBM10P98175 930 aaKnown RBP3.91□□□□□ -1.78
NEB-220ENST00000618972 SAFB2Q14151 953 aaKnown RBP eCLIP3.91□□□□□ -1.78
NEB-220ENST00000618972 ABCC9O60706 1549 aa3.91□□□□□ -1.78
NEB-220ENST00000618972 ZRSR1Q15695 479 aaKnown RBP3.91□□□□□ -1.78
NEB-220ENST00000618972 PCDHB15Q9Y5E8 787 aa3.91□□□□□ -1.78
NEB-220ENST00000618972 NUDCQ9Y266 331 aa3.9□□□□□ -1.78
NEB-220ENST00000618972 GPS2Q13227 327 aa3.9□□□□□ -1.78
NEB-220ENST00000618972 CHMP4AQ9BY43 222 aa3.9□□□□□ -1.78
NEB-220ENST00000618972 APBB1O00213 710 aa3.9□□□□□ -1.79
NEB-220ENST00000618972 TSC1Q92574 1164 aa3.9□□□□□ -1.79
NEB-220ENST00000618972 C16orf71Q8IYS4 520 aaPredicted RBP3.9□□□□□ -1.79
NEB-220ENST00000618972 MSNP26038 577 aaKnown RBP3.9□□□□□ -1.79
NEB-220ENST00000618972 GOLGA6L1Q8N7Z2 621 aa3.9□□□□□ -1.79
NEB-220ENST00000618972 PDIA4P13667 645 aaKnown RBP3.9□□□□□ -1.79
NEB-220ENST00000618972 TAF7LQ5H9L4 462 aa3.89□□□□□ -1.79
NEB-220ENST00000618972 RBM42Q9BTD8 480 aaKnown RBP3.89□□□□□ -1.79
NEB-220ENST00000618972 CASC1Q6TDU7 716 aa3.89□□□□□ -1.79
NEB-220ENST00000618972 STK26Q9P289 416 aa3.89□□□□□ -1.79
NEB-220ENST00000618972 NAP1L5Q96NT1 182 aaPredicted RBP3.89□□□□□ -1.79
NEB-220ENST00000618972 LARP6Q9BRS8 491 aaKnown RBP3.89□□□□□ -1.79
NEB-220ENST00000618972 FAM177BA6PVY3 158 aa3.89□□□□□ -1.79
NEB-220ENST00000618972 RLBP1P12271 317 aa3.89□□□□□ -1.79
NEB-220ENST00000618972 TEX35Q5T0J7 233 aa3.89□□□□□ -1.79
NEB-220ENST00000618972 PDCL2Q8N4E4 241 aa3.89□□□□□ -1.79
NEB-220ENST00000618972 DHX8Q14562 1220 aaKnown RBP3.88□□□□□ -1.79
NEB-220ENST00000618972 FOXD4L6Q3SYB3 417 aaPredicted RBP3.88□□□□□ -1.79
NEB-220ENST00000618972 FOXD4L3Q6VB84 417 aaPredicted RBP3.88□□□□□ -1.79
NEB-220ENST00000618972 ZBTB9Q96C00 473 aa3.88□□□□□ -1.79
NEB-220ENST00000618972 RRP1P56182 461 aaKnown RBP3.88□□□□□ -1.79
NEB-220ENST00000618972 AAMPQ13685 434 aa3.88□□□□□ -1.79
NEB-220ENST00000618972 TMEM132EQ6IEE7 984 aa3.88□□□□□ -1.79
NEB-220ENST00000618972 TONSLQ96HA7 1378 aa3.88□□□□□ -1.79
NEB-220ENST00000618972 PANK2Q9BZ23 570 aa3.88□□□□□ -1.79
NEB-220ENST00000618972 SLC12A5Q9H2X9 1139 aa3.88□□□□□ -1.79
NEB-220ENST00000618972 THUMPD2Q9BTF0 503 aaKnown RBP3.87□□□□□ -1.79
NEB-220ENST00000618972 PDCL3Q9H2J4 239 aa3.87□□□□□ -1.79
NEB-220ENST00000618972 PTMAP06454 111 aaKnown RBP3.87□□□□□ -1.79
NEB-220ENST00000618972 XRCC6P12956 609 aaKnown RBP eCLIP3.87□□□□□ -1.79
NEB-220ENST00000618972 CARD14Q9BXL6 1004 aa3.87□□□□□ -1.79
NEB-220ENST00000618972 RRP9O43818 475 aaKnown RBP3.87□□□□□ -1.79
NEB-220ENST00000618972 AXDND1Q5T1B0 1012 aaPredicted RBP3.87□□□□□ -1.79
NEB-220ENST00000618972 STK11IPQ8N1F8 1099 aa3.87□□□□□ -1.79
NEB-220ENST00000618972 PDZRN3Q9UPQ7 1066 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms