RNA–Protein interactions for RNA: ENST00000618834.1

PCDHA4-204, Transcript of protocadherin alpha 4, humanhuman

BASIC

Gene PCDHA4, Length 10,557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-204ENST00000618834 PRM3Q9NNZ6 103 aa14.46□□□□□ -0.09
PCDHA4-204ENST00000618834 CCDC34Q96HJ3 373 aa14.46□□□□□ -0.1
PCDHA4-204ENST00000618834 ZNF771Q7L3S4 317 aaPredicted RBP14.44□□□□□ -0.1
PCDHA4-204ENST00000618834 ISY1Q9ULR0 285 aaKnown RBP14.44□□□□□ -0.1
PCDHA4-204ENST00000618834 MYO15BQ96JP2 1530 aa14.44□□□□□ -0.1
PCDHA4-204ENST00000618834 IPO9Q96P70 1041 aaKnown RBP14.44□□□□□ -0.1
PCDHA4-204ENST00000618834 RGL3Q3MIN7 710 aa14.43□□□□□ -0.1
PCDHA4-204ENST00000618834 VSIG10Q8N0Z9 540 aa14.43□□□□□ -0.1
PCDHA4-204ENST00000618834 TCERG1O14776 1098 aaKnown RBP14.43□□□□□ -0.1
PCDHA4-204ENST00000618834 TPM3P06753 285 aa14.43□□□□□ -0.1
PCDHA4-204ENST00000618834 DDX11L8A8MPP1 907 aa14.43□□□□□ -0.1
PCDHA4-204ENST00000618834 U2SURPO15042 1029 aaKnown RBP14.42□□□□□ -0.1
PCDHA4-204ENST00000618834 GPATCH3Q96I76 525 aa14.4□□□□□ -0.1
PCDHA4-204ENST00000618834 CALD1Q05682 793 aaKnown RBP14.4□□□□□ -0.1
PCDHA4-204ENST00000618834 IPO8O15397 1037 aaKnown RBP14.4□□□□□ -0.1
PCDHA4-204ENST00000618834 HSP90B1P14625 803 aaKnown RBP14.4□□□□□ -0.1
PCDHA4-204ENST00000618834 PDE4CQ08493 712 aa14.4□□□□□ -0.1
PCDHA4-204ENST00000618834 GPS2Q13227 327 aa14.4□□□□□ -0.1
PCDHA4-204ENST00000618834 CCER2I3L3R5 266 aa14.38□□□□□ -0.11
PCDHA4-204ENST00000618834 CCDC70Q6NSX1 233 aa14.38□□□□□ -0.11
PCDHA4-204ENST00000618834 RWDD1Q9H446 243 aaPredicted RBP14.38□□□□□ -0.11
PCDHA4-204ENST00000618834 KTN1Q86UP2 1357 aaKnown RBP14.38□□□□□ -0.11
PCDHA4-204ENST00000618834 TEX35Q5T0J7 233 aa14.38□□□□□ -0.11
PCDHA4-204ENST00000618834 EEA1Q15075 1411 aa14.36□□□□□ -0.11
PCDHA4-204ENST00000618834 POGKQ9P215 609 aa14.36□□□□□ -0.11
PCDHA4-204ENST00000618834 PATL2C9JE40 543 aaKnown RBP14.36□□□□□ -0.11
PCDHA4-204ENST00000618834 ITPRIPQ8IWB1 547 aa14.36□□□□□ -0.11
PCDHA4-204ENST00000618834 APBB1O00213 710 aa14.35□□□□□ -0.11
PCDHA4-204ENST00000618834 MFAP1P55081 439 aaKnown RBP14.35□□□□□ -0.11
PCDHA4-204ENST00000618834 RCAN3Q9UKA8 241 aa14.34□□□□□ -0.11
PCDHA4-204ENST00000618834 KIF16BQ96L93 1317 aa14.34□□□□□ -0.11
PCDHA4-204ENST00000618834 NOM1Q5C9Z4 860 aaKnown RBP14.34□□□□□ -0.11
PCDHA4-204ENST00000618834 CCAR2Q8N163 923 aaKnown RBP14.34□□□□□ -0.11
PCDHA4-204ENST00000618834 CEP89Q96ST8 783 aa14.33□□□□□ -0.12
PCDHA4-204ENST00000618834 CREBRFQ8IUR6 639 aa14.33□□□□□ -0.12
PCDHA4-204ENST00000618834 RASSF8Q8NHQ8 419 aa14.32□□□□□ -0.12
PCDHA4-204ENST00000618834 TMF1P82094 1093 aa14.32□□□□□ -0.12
PCDHA4-204ENST00000618834 PMFBP1Q8TBY8 1022 aa14.32□□□□□ -0.12
PCDHA4-204ENST00000618834 TSR1Q2NL82 804 aaKnown RBP14.31□□□□□ -0.12
PCDHA4-204ENST00000618834 ST18O60284 1047 aa14.31□□□□□ -0.12
PCDHA4-204ENST00000618834 RRP12Q5JTH9 1297 aaKnown RBP14.3□□□□□ -0.12
PCDHA4-204ENST00000618834 TSHZ2Q9NRE2 1034 aa14.29□□□□□ -0.12
PCDHA4-204ENST00000618834 RTF1Q92541 710 aaKnown RBP14.28□□□□□ -0.12
PCDHA4-204ENST00000618834 TRIM6-TRIM34B2RNG4 842 aa14.28□□□□□ -0.12
PCDHA4-204ENST00000618834 TPM1P09493 284 aa14.28□□□□□ -0.12
PCDHA4-204ENST00000618834 MORC1Q86VD1 984 aa14.28□□□□□ -0.12
PCDHA4-204ENST00000618834 SKOR2Q2VWA4 1001 aaPredicted RBP14.28□□□□□ -0.12
PCDHA4-204ENST00000618834 KAT6BQ8WYB5 2073 aa14.28□□□□□ -0.12
PCDHA4-204ENST00000618834 CEP164Q9UPV0 1460 aa14.28□□□□□ -0.12
PCDHA4-204ENST00000618834 LMOD2Q6P5Q4 547 aa14.28□□□□□ -0.12
PCDHA4-204ENST00000618834 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.28□□□□□ -0.12
PCDHA4-204ENST00000618834 GOLGA6L19H0YKK7 550 aa14.27□□□□□ -0.13
PCDHA4-204ENST00000618834 FOXD4L1Q9NU39 408 aa14.27□□□□□ -0.13
PCDHA4-204ENST00000618834 GSE1Q14687 1217 aa14.26□□□□□ -0.13
PCDHA4-204ENST00000618834 TPD52L1Q16890 204 aaPredicted RBP14.26□□□□□ -0.13
PCDHA4-204ENST00000618834 PES1O00541 588 aaKnown RBP14.25□□□□□ -0.13
PCDHA4-204ENST00000618834 KANK1Q14678 1352 aa14.25□□□□□ -0.13
PCDHA4-204ENST00000618834 KIF3AQ9Y496 699 aa14.25□□□□□ -0.13
PCDHA4-204ENST00000618834 TPM2P07951 284 aa14.24□□□□□ -0.13
PCDHA4-204ENST00000618834 ZNF592Q92610 1267 aa14.24□□□□□ -0.13
PCDHA4-204ENST00000618834 CFDP1Q9UEE9 299 aaPredicted RBP14.24□□□□□ -0.13
PCDHA4-204ENST00000618834 NOL8Q76FK4 1167 aaKnown RBP14.24□□□□□ -0.13
PCDHA4-204ENST00000618834 FAM13BQ9NYF5 915 aa14.24□□□□□ -0.13
PCDHA4-204ENST00000618834 HMMRO75330 724 aa14.23□□□□□ -0.13
PCDHA4-204ENST00000618834 CHMP7Q8WUX9 453 aaPredicted RBP14.23□□□□□ -0.13
PCDHA4-204ENST00000618834 TIMELESSQ9UNS1 1208 aa14.23□□□□□ -0.13
PCDHA4-204ENST00000618834 ATP6V1DQ9Y5K8 247 aa14.23□□□□□ -0.13
PCDHA4-204ENST00000618834 FOXD4L5Q5VV16 416 aaPredicted RBP14.23□□□□□ -0.13
PCDHA4-204ENST00000618834 FOXD4L4Q8WXT5 416 aaPredicted RBP14.23□□□□□ -0.13
PCDHA4-204ENST00000618834 APPP05067 770 aa14.23□□□□□ -0.13
PCDHA4-204ENST00000618834 AK7Q96M32 723 aa14.23□□□□□ -0.13
PCDHA4-204ENST00000618834 H3BQV1 296 aa14.22□□□□□ -0.13
PCDHA4-204ENST00000618834 IFFO2Q5TF58 517 aa14.22□□□□□ -0.13
PCDHA4-204ENST00000618834 PLEKHD1A6NEE1 506 aa14.22□□□□□ -0.13
PCDHA4-204ENST00000618834 SIN3AQ96ST3 1273 aa14.21□□□□□ -0.13
PCDHA4-204ENST00000618834 CCNB3Q8WWL7 1395 aa14.21□□□□□ -0.13
PCDHA4-204ENST00000618834 SF3A1Q15459 793 aaKnown RBP14.21□□□□□ -0.13
PCDHA4-204ENST00000618834 CWC15Q9P013 229 aaKnown RBP14.21□□□□□ -0.14
PCDHA4-204ENST00000618834 RALBP1Q15311 655 aa14.2□□□□□ -0.14
PCDHA4-204ENST00000618834 KCNH8Q96L42 1107 aa14.2□□□□□ -0.14
PCDHA4-204ENST00000618834 EIF3AQ14152 1382 aaKnown RBP14.2□□□□□ -0.14
PCDHA4-204ENST00000618834 GORABQ5T7V8 394 aa14.2□□□□□ -0.14
PCDHA4-204ENST00000618834 ARHGAP35Q9NRY4 1499 aa14.19□□□□□ -0.14
PCDHA4-204ENST00000618834 BECN2A8MW95 431 aa14.19□□□□□ -0.14
PCDHA4-204ENST00000618834 ROCK2O75116 1388 aaKnown RBP14.19□□□□□ -0.14
PCDHA4-204ENST00000618834 RUFY1Q96T51 708 aa14.18□□□□□ -0.14
PCDHA4-204ENST00000618834 SRPK2P78362 688 aaKnown RBP14.18□□□□□ -0.14
PCDHA4-204ENST00000618834 MAP7D2Q96T17 732 aa14.18□□□□□ -0.14
PCDHA4-204ENST00000618834 ACBD3Q9H3P7 528 aa14.18□□□□□ -0.14
PCDHA4-204ENST00000618834 DDX49Q9Y6V7 483 aaKnown RBP14.18□□□□□ -0.14
PCDHA4-204ENST00000618834 FHAD1B1AJZ9 1412 aa14.17□□□□□ -0.14
PCDHA4-204ENST00000618834 MTERF4Q7Z6M4 381 aaKnown RBP14.17□□□□□ -0.14
PCDHA4-204ENST00000618834 ARGLU1Q9NWB6 273 aaPredicted RBP14.17□□□□□ -0.14
PCDHA4-204ENST00000618834 DCAF11Q8TEB1 546 aa14.17□□□□□ -0.14
PCDHA4-204ENST00000618834 TAF7LQ5H9L4 462 aa14.16□□□□□ -0.14
PCDHA4-204ENST00000618834 SPAG9O60271 1321 aaKnown RBP14.16□□□□□ -0.14
PCDHA4-204ENST00000618834 VPS53Q5VIR6 699 aa14.16□□□□□ -0.14
PCDHA4-204ENST00000618834 SMC4Q9NTJ3 1288 aa14.16□□□□□ -0.14
PCDHA4-204ENST00000618834 IPO7O95373 1038 aaKnown RBP14.16□□□□□ -0.14
PCDHA4-204ENST00000618834 PHLDB1Q86UU1 1377 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms