RNA–Protein interactions for RNA: ENST00000618621.4

LPP-221, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-221ENST00000618621 ARID4BQ4LE39 1312 aaPredicted RBP3.91□□□□□ -1.78
LPP-221ENST00000618621 ERCC6Q03468 1493 aa3.91□□□□□ -1.78
LPP-221ENST00000618621 RAB3GAP2Q9H2M9 1393 aa3.91□□□□□ -1.78
LPP-221ENST00000618621 PDE3BQ13370 1112 aa3.91□□□□□ -1.78
LPP-221ENST00000618621 CCDC88BA6NC98 1476 aa3.91□□□□□ -1.78
LPP-221ENST00000618621 PTMSP20962 102 aa3.91□□□□□ -1.78
LPP-221ENST00000618621 CYB5RLQ6IPT4 315 aa3.91□□□□□ -1.78
LPP-221ENST00000618621 MROH2BQ7Z745 1585 aa3.91□□□□□ -1.78
LPP-221ENST00000618621 TAF7LQ5H9L4 462 aa3.91□□□□□ -1.78
LPP-221ENST00000618621 NACADO15069 1562 aa3.91□□□□□ -1.78
LPP-221ENST00000618621 CARMIL1Q5VZK9 1371 aa3.91□□□□□ -1.78
LPP-221ENST00000618621 ARID3AQ99856 593 aa3.91□□□□□ -1.78
LPP-221ENST00000618621 GOLGA3Q08378 1498 aa3.91□□□□□ -1.78
LPP-221ENST00000618621 DHX57Q6P158 1386 aaKnown RBP3.9□□□□□ -1.78
LPP-221ENST00000618621 TMF1P82094 1093 aa3.9□□□□□ -1.78
LPP-221ENST00000618621 MPHOSPH9Q99550 1183 aa3.9□□□□□ -1.78
LPP-221ENST00000618621 JPH4Q96JJ6 628 aa3.9□□□□□ -1.79
LPP-221ENST00000618621 RWDD1Q9H446 243 aaPredicted RBP3.9□□□□□ -1.79
LPP-221ENST00000618621 NAP1L5Q96NT1 182 aaPredicted RBP3.9□□□□□ -1.79
LPP-221ENST00000618621 FBXO3Q9UK99 471 aa3.9□□□□□ -1.79
LPP-221ENST00000618621 VPS8Q8N3P4 1428 aa3.89□□□□□ -1.79
LPP-221ENST00000618621 CC2D1BQ5T0F9 858 aaKnown RBP3.89□□□□□ -1.79
LPP-221ENST00000618621 GGT6Q6P531 493 aa3.89□□□□□ -1.79
LPP-221ENST00000618621 ZBTB7CA1YPR0 619 aa3.89□□□□□ -1.79
LPP-221ENST00000618621 FGD1P98174 961 aa3.89□□□□□ -1.79
LPP-221ENST00000618621 HSP90AB1P08238 724 aaKnown RBP3.89□□□□□ -1.79
LPP-221ENST00000618621 PKNOX2Q96KN3 472 aa3.89□□□□□ -1.79
LPP-221ENST00000618621 HSCBQ8IWL3 235 aa3.89□□□□□ -1.79
LPP-221ENST00000618621 CUX2O14529 1486 aa3.89□□□□□ -1.79
LPP-221ENST00000618621 HNRNPMP52272 730 aaKnown RBP eCLIP3.89□□□□□ -1.791e-6■■■■□ 19.6
LPP-221ENST00000618621 FOXD1Q16676 465 aa3.89□□□□□ -1.79
LPP-221ENST00000618621 PDE4AP27815 886 aa3.89□□□□□ -1.79
LPP-221ENST00000618621 MSH5O43196 834 aa3.88□□□□□ -1.79
LPP-221ENST00000618621 KIF27Q86VH2 1401 aa3.88□□□□□ -1.79
LPP-221ENST00000618621 ZRSR1Q15695 479 aaKnown RBP3.88□□□□□ -1.79
LPP-221ENST00000618621 HDGFP51858 240 aaKnown RBP3.88□□□□□ -1.79
LPP-221ENST00000618621 PDCL3Q9H2J4 239 aa3.88□□□□□ -1.79
LPP-221ENST00000618621 CADPSQ9ULU8 1353 aa3.88□□□□□ -1.79
LPP-221ENST00000618621 HSP90B1P14625 803 aaKnown RBP3.88□□□□□ -1.79
LPP-221ENST00000618621 RSPH6AQ9H0K4 717 aa3.88□□□□□ -1.79
LPP-221ENST00000618621 PPP6R1Q9UPN7 881 aa3.88□□□□□ -1.79
LPP-221ENST00000618621 GBP4Q96PP9 640 aa3.87□□□□□ -1.79
LPP-221ENST00000618621 MCCP23508 829 aa3.87□□□□□ -1.79
LPP-221ENST00000618621 DCAF11Q8TEB1 546 aa3.87□□□□□ -1.79
LPP-221ENST00000618621 ZBTB4Q9P1Z0 1013 aaPredicted RBP3.87□□□□□ -1.79
LPP-221ENST00000618621 RGS3P49796 1198 aa3.87□□□□□ -1.79
LPP-221ENST00000618621 PAK3O75914 559 aaPredicted RBP3.87□□□□□ -1.79
LPP-221ENST00000618621 DNTTIP2Q5QJE6 756 aaKnown RBP3.87□□□□□ -1.79
LPP-221ENST00000618621 FRAT1Q92837 279 aaPredicted RBP3.87□□□□□ -1.79
LPP-221ENST00000618621 GOLGA6L6A8MZA4 724 aa3.87□□□□□ -1.79
LPP-221ENST00000618621 BRD2P25440 801 aaKnown RBP3.87□□□□□ -1.79
LPP-221ENST00000618621 RSPH4AQ5TD94 716 aa3.87□□□□□ -1.79
LPP-221ENST00000618621 CEP164Q9UPV0 1460 aa3.86□□□□□ -1.79
LPP-221ENST00000618621 CHAF1AQ13111 956 aaPredicted RBP3.86□□□□□ -1.79
LPP-221ENST00000618621 PAXIP1Q6ZW49 1069 aaPredicted RBP3.86□□□□□ -1.79
LPP-221ENST00000618621 PMFBP1Q8TBY8 1022 aa3.86□□□□□ -1.79
LPP-221ENST00000618621 NRDCO43847 1150 aa3.86□□□□□ -1.79
LPP-221ENST00000618621 MORC1Q86VD1 984 aa3.86□□□□□ -1.79
LPP-221ENST00000618621 ATAD2BQ9ULI0 1458 aa3.86□□□□□ -1.79
LPP-221ENST00000618621 GOLGA6L3A6NEY3 463 aa3.86□□□□□ -1.79
LPP-221ENST00000618621 KIAA1211Q6ZU35 1233 aa3.86□□□□□ -1.79
LPP-221ENST00000618621 CALD1Q05682 793 aaKnown RBP3.86□□□□□ -1.79
LPP-221ENST00000618621 CALRP27797 417 aaKnown RBP3.86□□□□□ -1.79
LPP-221ENST00000618621 PPP1R1BQ9UD71 204 aaPredicted RBP3.86□□□□□ -1.79
LPP-221ENST00000618621 RUSC2Q8N2Y8 1516 aa3.86□□□□□ -1.79
LPP-221ENST00000618621 PDS5BQ9NTI5 1447 aa3.86□□□□□ -1.79
LPP-221ENST00000618621 ZBED9Q6R2W3 1325 aa3.85□□□□□ -1.79
LPP-221ENST00000618621 PRKRIP1Q9H875 184 aaPredicted RBP3.85□□□□□ -1.79
LPP-221ENST00000618621 PKD2Q13563 968 aa3.85□□□□□ -1.79
LPP-221ENST00000618621 GOLGA2Q08379 1002 aa3.85□□□□□ -1.79
LPP-221ENST00000618621 GOLGA6L4A6NEF3 574 aa3.85□□□□□ -1.79
LPP-221ENST00000618621 NLRP13Q86W25 1043 aa3.85□□□□□ -1.79
LPP-221ENST00000618621 APPP05067 770 aa3.84□□□□□ -1.79
LPP-221ENST00000618621 BRPF3Q9ULD4 1205 aa3.84□□□□□ -1.79
LPP-221ENST00000618621 A0A0U1RQG5 324 aaPredicted RBP3.84□□□□□ -1.79
LPP-221ENST00000618621 SLC4A3P48751 1232 aa3.84□□□□□ -1.79
LPP-221ENST00000618621 NEUROD2Q15784 382 aa3.84□□□□□ -1.79
LPP-221ENST00000618621 NOP2P46087 812 aaKnown RBP3.84□□□□□ -1.79
LPP-221ENST00000618621 HDAC5Q9UQL6 1122 aa3.84□□□□□ -1.79
LPP-221ENST00000618621 PANK3Q9H999 370 aa3.84□□□□□ -1.79
LPP-221ENST00000618621 SKOR2Q2VWA4 1001 aaPredicted RBP3.84□□□□□ -1.79
LPP-221ENST00000618621 PNISRQ8TF01 805 aaKnown RBP3.84□□□□□ -1.79
LPP-221ENST00000618621 MSNP26038 577 aaKnown RBP3.84□□□□□ -1.79
LPP-221ENST00000618621 OSCARQ8IYS5 282 aa3.84□□□□□ -1.8
LPP-221ENST00000618621 EXOC6Q8TAG9 804 aa3.84□□□□□ -1.8
LPP-221ENST00000618621 CENPQQ7L2Z9 268 aaPredicted RBP3.84□□□□□ -1.8
LPP-221ENST00000618621 IL27Q8NEV9 243 aa3.84□□□□□ -1.8
LPP-221ENST00000618621 ZNF428Q96B54 188 aa3.84□□□□□ -1.8
LPP-221ENST00000618621 POGKQ9P215 609 aa3.84□□□□□ -1.8
LPP-221ENST00000618621 CCDC9Q9Y3X0 531 aaKnown RBP3.84□□□□□ -1.8
LPP-221ENST00000618621 KIAA2012Q0VF49 1180 aa3.84□□□□□ -1.8
LPP-221ENST00000618621 SAFB2Q14151 953 aaKnown RBP eCLIP3.84□□□□□ -1.8
LPP-221ENST00000618621 NUTM2DQ5VT03 806 aaPredicted RBP3.84□□□□□ -1.8
LPP-221ENST00000618621 SYAP1Q96A49 352 aaPredicted RBP3.83□□□□□ -1.8
LPP-221ENST00000618621 IGF1RP08069 1367 aa3.83□□□□□ -1.8
LPP-221ENST00000618621 CSPP1Q1MSJ5 1256 aa3.83□□□□□ -1.8
LPP-221ENST00000618621 NGEFQ8N5V2 710 aa3.83□□□□□ -1.8
LPP-221ENST00000618621 STK26Q9P289 416 aa3.83□□□□□ -1.8
LPP-221ENST00000618621 GSE1Q14687 1217 aa3.83□□□□□ -1.8
LPP-221ENST00000618621 CRBNQ96SW2 442 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms