RNA–Protein interactions for RNA: ENST00000618166.4

SCAMP1-206, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 2 BASIC

Gene SCAMP1, Length 1,358 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-206ENST00000618166 TEX14Q8IWB6 1497 aa13.11□□□□□ -0.31
SCAMP1-206ENST00000618166 ADAMTSL3P82987 1691 aa13.08□□□□□ -0.32
SCAMP1-206ENST00000618166 CUL7Q14999 1698 aa13.08□□□□□ -0.32
SCAMP1-206ENST00000618166 ERICH3Q5RHP9 1530 aa13.08□□□□□ -0.32
SCAMP1-206ENST00000618166 PTPRGP23470 1445 aa13.08□□□□□ -0.32
SCAMP1-206ENST00000618166 CD44P16070 742 aaKnown RBP13.07□□□□□ -0.32
SCAMP1-206ENST00000618166 CLCN6P51797 869 aa13.07□□□□□ -0.32
SCAMP1-206ENST00000618166 FARP1Q9Y4F1 1045 aaPredicted RBP13.05□□□□□ -0.32
SCAMP1-206ENST00000618166 WRNQ14191 1432 aaPredicted RBP eCLIP13.04□□□□□ -0.32
SCAMP1-206ENST00000618166 MADDQ8WXG6 1647 aa13.01□□□□□ -0.33
SCAMP1-206ENST00000618166 KIAA0586Q9BVV6 1533 aa12.99□□□□□ -0.33
SCAMP1-206ENST00000618166 UHRF1BP1LA0JNW5 1464 aa12.96□□□□□ -0.33
SCAMP1-206ENST00000618166 TNIKQ9UKE5 1360 aa12.95□□□□□ -0.34
SCAMP1-206ENST00000618166 BCORL1Q5H9F3 1711 aa12.94□□□□□ -0.34
SCAMP1-206ENST00000618166 KDM5BQ9UGL1 1544 aa12.94□□□□□ -0.34
SCAMP1-206ENST00000618166 UACAQ9BZF9 1416 aa12.93□□□□□ -0.34
SCAMP1-206ENST00000618166 ZCCHC11Q5TAX3 1644 aaKnown RBP12.93□□□□□ -0.34
SCAMP1-206ENST00000618166 MAGI3Q5TCQ9 1506 aa12.92□□□□□ -0.34
SCAMP1-206ENST00000618166 CD109Q6YHK3 1445 aa12.92□□□□□ -0.34
SCAMP1-206ENST00000618166 POTEMA6NI47 508 aa12.92□□□□□ -0.34
SCAMP1-206ENST00000618166 DCBLD2Q96PD2 775 aa12.92□□□□□ -0.34
SCAMP1-206ENST00000618166 RIMS1Q86UR5 1692 aaKnown RBP12.92□□□□□ -0.34
SCAMP1-206ENST00000618166 WDR7Q9Y4E6 1490 aa12.9□□□□□ -0.34
SCAMP1-206ENST00000618166 ARID4BQ4LE39 1312 aaPredicted RBP12.89□□□□□ -0.35
SCAMP1-206ENST00000618166 ZNF579Q8NAF0 562 aaKnown RBP12.88□□□□□ -0.35
SCAMP1-206ENST00000618166 BIVM-ERCC5R4GMW8 1640 aa12.87□□□□□ -0.35
SCAMP1-206ENST00000618166 ARAP3Q8WWN8 1544 aa12.85□□□□□ -0.35
SCAMP1-206ENST00000618166 KCNH8Q96L42 1107 aa12.85□□□□□ -0.35
SCAMP1-206ENST00000618166 CARMIL2Q6F5E8 1435 aa12.85□□□□□ -0.35
SCAMP1-206ENST00000618166 RAPGEF3O95398 923 aa12.84□□□□□ -0.35
SCAMP1-206ENST00000618166 CFAP43Q8NDM7 1665 aa12.84□□□□□ -0.35
SCAMP1-206ENST00000618166 POTEGQ6S5H5 508 aa12.82□□□□□ -0.36
SCAMP1-206ENST00000618166 ZRANB1Q9UGI0 708 aa12.81□□□□□ -0.36
SCAMP1-206ENST00000618166 DISP1Q96F81 1524 aa12.81□□□□□ -0.36
SCAMP1-206ENST00000618166 STRCQ7RTU9 1775 aa12.8□□□□□ -0.36
SCAMP1-206ENST00000618166 YEATS2Q9ULM3 1422 aa12.8□□□□□ -0.36
SCAMP1-206ENST00000618166 MED1Q15648 1581 aaPredicted RBP12.79□□□□□ -0.36
SCAMP1-206ENST00000618166 LTBP4Q8N2S1 1624 aa12.78□□□□□ -0.36
SCAMP1-206ENST00000618166 FRMPD1Q5SYB0 1578 aa12.77□□□□□ -0.37
SCAMP1-206ENST00000618166 IGF1RP08069 1367 aa12.76□□□□□ -0.37
SCAMP1-206ENST00000618166 OTUD5Q96G74 571 aa12.75□□□□□ -0.37
SCAMP1-206ENST00000618166 CREBZFQ9NS37 354 aa12.75□□□□□ -0.37
SCAMP1-206ENST00000618166 GALR2O43603 387 aaPredicted RBP12.74□□□□□ -0.37
SCAMP1-206ENST00000618166 SIGLEC1Q9BZZ2 1709 aa12.73□□□□□ -0.37
SCAMP1-206ENST00000618166 PCDH10Q9P2E7 1040 aa12.73□□□□□ -0.37
SCAMP1-206ENST00000618166 IQGAP2Q13576 1575 aa12.73□□□□□ -0.37
SCAMP1-206ENST00000618166 ARHGEF40Q8TER5 1519 aa12.71□□□□□ -0.38
SCAMP1-206ENST00000618166 IQSEC2Q5JU85 1478 aa12.7□□□□□ -0.38
SCAMP1-206ENST00000618166 UBAP1LF5GYI3 381 aa12.7□□□□□ -0.38
SCAMP1-206ENST00000618166 MLECQ14165 292 aa12.7□□□□□ -0.38
SCAMP1-206ENST00000618166 CEBPAP49715 358 aaPredicted RBP12.69□□□□□ -0.38
SCAMP1-206ENST00000618166 PREX1Q8TCU6 1659 aa12.69□□□□□ -0.38
SCAMP1-206ENST00000618166 POTEB2H3BUK9 544 aa12.69□□□□□ -0.38
SCAMP1-206ENST00000618166 TTC37Q6PGP7 1564 aa12.68□□□□□ -0.38
SCAMP1-206ENST00000618166 PTPRTO14522 1441 aa12.68□□□□□ -0.38
SCAMP1-206ENST00000618166 STAG3Q9UJ98 1225 aa12.68□□□□□ -0.38
SCAMP1-206ENST00000618166 HSPA1LP34931 641 aa12.67□□□□□ -0.38
SCAMP1-206ENST00000618166 KIAA0556O60303 1618 aa12.65□□□□□ -0.38
SCAMP1-206ENST00000618166 FER1L4A9Z1Z3 1794 aa12.64□□□□□ -0.39
SCAMP1-206ENST00000618166 ARID3CA6NKF2 412 aa12.64□□□□□ -0.39
SCAMP1-206ENST00000618166 FANCAO15360 1455 aa12.63□□□□□ -0.39
SCAMP1-206ENST00000618166 PHLDB1Q86UU1 1377 aa12.63□□□□□ -0.39
SCAMP1-206ENST00000618166 POGZQ7Z3K3 1410 aa12.63□□□□□ -0.39
SCAMP1-206ENST00000618166 CARMIL1Q5VZK9 1371 aa12.62□□□□□ -0.39
SCAMP1-206ENST00000618166 NEO1Q92859 1461 aa12.62□□□□□ -0.39
SCAMP1-206ENST00000618166 UGGT2Q9NYU1 1516 aa12.61□□□□□ -0.39
SCAMP1-206ENST00000618166 UHRF1BP1Q6BDS2 1440 aa12.61□□□□□ -0.39
SCAMP1-206ENST00000618166 ABCA9Q8IUA7 1624 aa12.6□□□□□ -0.39
SCAMP1-206ENST00000618166 ZNF335Q9H4Z2 1342 aaPredicted RBP12.6□□□□□ -0.39
SCAMP1-206ENST00000618166 ABCA8O94911 1581 aa12.6□□□□□ -0.39
SCAMP1-206ENST00000618166 PAK3O75914 559 aaPredicted RBP12.58□□□□□ -0.4
SCAMP1-206ENST00000618166 PHF12Q96QT6 1004 aa12.58□□□□□ -0.4
SCAMP1-206ENST00000618166 AKNAQ7Z591 1439 aa12.58□□□□□ -0.4
SCAMP1-206ENST00000618166 KIF27Q86VH2 1401 aa12.58□□□□□ -0.4
SCAMP1-206ENST00000618166 PIP4K2BP78356 416 aa12.57□□□□□ -0.4
SCAMP1-206ENST00000618166 ARHGEF12Q9NZN5 1544 aa12.57□□□□□ -0.4
SCAMP1-206ENST00000618166 RICTORQ6R327 1708 aa12.56□□□□□ -0.4
SCAMP1-206ENST00000618166 PELP1Q8IZL8 1130 aaKnown RBP12.56□□□□□ -0.4
SCAMP1-206ENST00000618166 DENND4BO75064 1496 aaPredicted RBP12.55□□□□□ -0.4
SCAMP1-206ENST00000618166 ZFYVE16Q7Z3T8 1539 aa12.54□□□□□ -0.4
SCAMP1-206ENST00000618166 RGS17Q9UGC6 210 aaPredicted RBP12.54□□□□□ -0.4
SCAMP1-206ENST00000618166 NCOA1Q15788 1441 aa12.54□□□□□ -0.4
SCAMP1-206ENST00000618166 FHOD3Q2V2M9 1422 aa12.53□□□□□ -0.4
SCAMP1-206ENST00000618166 SRCAPQ6ZRS2 3230 aa12.52□□□□□ -0.4
SCAMP1-206ENST00000618166 ATP10BO94823 1461 aa12.51□□□□□ -0.41
SCAMP1-206ENST00000618166 ZMYM4Q5VZL5 1548 aa12.5□□□□□ -0.41
SCAMP1-206ENST00000618166 MNX1P50219 401 aaPredicted RBP12.49□□□□□ -0.41
SCAMP1-206ENST00000618166 EFCAB5A4FU69 1503 aa12.49□□□□□ -0.41
SCAMP1-206ENST00000618166 NCKAP5LQ9HCH0 1330 aa12.48□□□□□ -0.41
SCAMP1-206ENST00000618166 ASTLQ6HA08 431 aaPredicted RBP12.47□□□□□ -0.41
SCAMP1-206ENST00000618166 HECW1Q76N89 1606 aa12.46□□□□□ -0.41
SCAMP1-206ENST00000618166 CAMSAP1Q5T5Y3 1602 aa12.45□□□□□ -0.42
SCAMP1-206ENST00000618166 SPDYE4A6NLX3 237 aa12.44□□□□□ -0.42
SCAMP1-206ENST00000618166 METRNQ9UJH8 293 aa12.44□□□□□ -0.42
SCAMP1-206ENST00000618166 POTEJP0CG39 1038 aa12.43□□□□□ -0.42
SCAMP1-206ENST00000618166 SLC39A7Q92504 469 aa12.43□□□□□ -0.42
SCAMP1-206ENST00000618166 C3P01024 1663 aa12.42□□□□□ -0.42
SCAMP1-206ENST00000618166 ATMINO43313 823 aaPredicted RBP12.42□□□□□ -0.42
SCAMP1-206ENST00000618166 C7P10643 843 aa12.42□□□□□ -0.42
SCAMP1-206ENST00000618166 POTEAQ6S8J7 498 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms