RNA–Protein interactions for RNA: ENST00000618139.2

EEF1D-256, Transcript of eukaryotic translation elongation factor 1 delta, human

TSL 5 BASIC

Gene EEF1D, Length 2,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EEF1D-256	ENST00000618139	CFDP1	Q9UEE9	299 aa	Predicted RBP	32.98	■■■□□ 2.87
EEF1D-256	ENST00000618139	AKNA	Q7Z591	1439 aa		32.98	■■■□□ 2.87
EEF1D-256	ENST00000618139	CDC42BPA	Q5VT25	1732 aa		32.98	■■■□□ 2.87
EEF1D-256	ENST00000618139	CAMSAP2	Q08AD1	1489 aa		32.98	■■■□□ 2.87
EEF1D-256	ENST00000618139	ABCC10	Q5T3U5	1492 aa		32.95	■■■□□ 2.87
EEF1D-256	ENST00000618139	ZNF777	Q9ULD5	760 aa	Predicted RBP	32.92	■■■□□ 2.86
EEF1D-256	ENST00000618139	ROCK1	Q13464	1354 aa		32.86	■■■□□ 2.85
EEF1D-256	ENST00000618139	ABCC2	Q92887	1545 aa		32.85	■■■□□ 2.85
EEF1D-256	ENST00000618139	DENND4B	O75064	1496 aa	Predicted RBP	32.82	■■■□□ 2.84
EEF1D-256	ENST00000618139	CROCC2	H7BZ55	1655 aa		32.81	■■■□□ 2.84
EEF1D-256	ENST00000618139	TRIM52	Q96A61	297 aa		32.8	■■■□□ 2.84
EEF1D-256	ENST00000618139	ADGB	Q8N7X0	1667 aa		32.77	■■■□□ 2.84
EEF1D-256	ENST00000618139	CDC42BPB	Q9Y5S2	1711 aa		32.75	■■■□□ 2.83
EEF1D-256	ENST00000618139	TIMELESS	Q9UNS1	1208 aa		32.73	■■■□□ 2.83
EEF1D-256	ENST00000618139	NCOA1	Q15788	1441 aa		32.72	■■■□□ 2.83
EEF1D-256	ENST00000618139	PREX2	Q70Z35	1606 aa		32.7	■■■□□ 2.83
EEF1D-256	ENST00000618139	TTC37	Q6PGP7	1564 aa		32.7	■■■□□ 2.83
EEF1D-256	ENST00000618139	ZCCHC11	Q5TAX3	1644 aa	Known RBP	32.69	■■■□□ 2.82
EEF1D-256	ENST00000618139	MPHOSPH9	Q99550	1183 aa		32.68	■■■□□ 2.82
EEF1D-256	ENST00000618139	ADGRL2	O95490	1459 aa		32.68	■■■□□ 2.82
EEF1D-256	ENST00000618139	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	32.66	■■■□□ 2.82	4e-6	■■■□□ 18.7
EEF1D-256	ENST00000618139	PPP1R15A	O75807	674 aa	Predicted RBP	32.66	■■■□□ 2.82
EEF1D-256	ENST00000618139	SAMD9L	Q8IVG5	1584 aa		32.65	■■■□□ 2.82
EEF1D-256	ENST00000618139	UHRF1BP1L	A0JNW5	1464 aa		32.64	■■■□□ 2.82
EEF1D-256	ENST00000618139	TONSL	Q96HA7	1378 aa		32.63	■■■□□ 2.81
EEF1D-256	ENST00000618139	HNRNPM	P52272	730 aa	Known RBP eCLIP	32.62	■■■□□ 2.81	2e-7	■■■■□ 20.7
EEF1D-256	ENST00000618139	FOXD1	Q16676	465 aa		32.62	■■■□□ 2.81
EEF1D-256	ENST00000618139	KDM5B	Q9UGL1	1544 aa		32.6	■■■□□ 2.81
EEF1D-256	ENST00000618139	MIER1	Q8N108	512 aa		32.59	■■■□□ 2.81
EEF1D-256	ENST00000618139	KCNH8	Q96L42	1107 aa		32.59	■■■□□ 2.81
EEF1D-256	ENST00000618139	MBD5	Q9P267	1494 aa		32.59	■■■□□ 2.81
EEF1D-256	ENST00000618139	ANKRD30A	Q9BXX3	1397 aa		32.58	■■■□□ 2.81
EEF1D-256	ENST00000618139	C9orf84	Q5VXU9	1444 aa		32.58	■■■□□ 2.81
EEF1D-256	ENST00000618139	SHANK2	Q9UPX8	1470 aa		32.57	■■■□□ 2.8
EEF1D-256	ENST00000618139	ARHGEF5	Q12774	1597 aa		32.56	■■■□□ 2.8
EEF1D-256	ENST00000618139	MYO5C	Q9NQX4	1742 aa		32.56	■■■□□ 2.8
EEF1D-256	ENST00000618139	ARHGAP5	Q13017	1502 aa		32.54	■■■□□ 2.8
EEF1D-256	ENST00000618139	PZP	P20742	1482 aa		32.5	■■■□□ 2.79
EEF1D-256	ENST00000618139	TSPY4	P0CV99	314 aa		32.5	■■■□□ 2.79
EEF1D-256	ENST00000618139	TSPY10	P0CW01	314 aa		32.5	■■■□□ 2.79
EEF1D-256	ENST00000618139	SLC4A1AP	Q9BWU0	796 aa	Known RBP	32.49	■■■□□ 2.79
EEF1D-256	ENST00000618139	ANKRD50	Q9ULJ7	1429 aa		32.49	■■■□□ 2.79
EEF1D-256	ENST00000618139	ACIN1	Q9UKV3	1341 aa	Known RBP	32.48	■■■□□ 2.79
EEF1D-256	ENST00000618139	SYCP2	Q9BX26	1530 aa		32.48	■■■□□ 2.79
EEF1D-256	ENST00000618139	CCDC141	Q6ZP82	1450 aa		32.47	■■■□□ 2.79
EEF1D-256	ENST00000618139	ANKRD30B	Q9BXX2	1392 aa		32.46	■■■□□ 2.79
EEF1D-256	ENST00000618139	OSCAR	Q8IYS5	282 aa		32.44	■■■□□ 2.78
EEF1D-256	ENST00000618139	KIF15	Q9NS87	1388 aa		32.4	■■■□□ 2.78
EEF1D-256	ENST00000618139	HIRIP3	Q9BW71	556 aa	Predicted RBP	32.39	■■■□□ 2.78
EEF1D-256	ENST00000618139	PLCH2	O75038	1416 aa		32.38	■■■□□ 2.77
EEF1D-256	ENST00000618139	ARHGEF12	Q9NZN5	1544 aa		32.36	■■■□□ 2.77
EEF1D-256	ENST00000618139	RSPH4A	Q5TD94	716 aa		32.35	■■■□□ 2.77
EEF1D-256	ENST00000618139	RPRD2	Q5VT52	1461 aa	Known RBP	32.35	■■■□□ 2.77
EEF1D-256	ENST00000618139	KIAA1107	Q9UPP5	1409 aa		32.32	■■■□□ 2.76
EEF1D-256	ENST00000618139	MAST1	Q9Y2H9	1570 aa		32.31	■■■□□ 2.76
EEF1D-256	ENST00000618139	L3MBTL2	Q969R5	705 aa		32.31	■■■□□ 2.76
EEF1D-256	ENST00000618139	WDR7	Q9Y4E6	1490 aa		32.3	■■■□□ 2.76
EEF1D-256	ENST00000618139	PLEKHH2	Q8IVE3	1493 aa		32.3	■■■□□ 2.76
EEF1D-256	ENST00000618139	NUP155	O75694	1391 aa		32.29	■■■□□ 2.76
EEF1D-256	ENST00000618139	PKD2	Q13563	968 aa		32.28	■■■□□ 2.76
EEF1D-256	ENST00000618139	EFCAB2	Q5VUJ9	269 aa		32.26	■■■□□ 2.75
EEF1D-256	ENST00000618139	KDM5D	Q9BY66	1539 aa		32.25	■■■□□ 2.75
EEF1D-256	ENST00000618139	TEX14	Q8IWB6	1497 aa		32.25	■■■□□ 2.75
EEF1D-256	ENST00000618139	ABCC1	P33527	1531 aa		32.24	■■■□□ 2.75
EEF1D-256	ENST00000618139	PLXNC1	O60486	1568 aa		32.2	■■■□□ 2.75
EEF1D-256	ENST00000618139	ASXL2	Q76L83	1435 aa		32.19	■■■□□ 2.74
EEF1D-256	ENST00000618139	TRAPPC8	Q9Y2L5	1435 aa		32.19	■■■□□ 2.74
EEF1D-256	ENST00000618139	YTHDC1	Q96MU7	727 aa	Known RBP	32.19	■■■□□ 2.74
EEF1D-256	ENST00000618139	DDX10	Q13206	875 aa	Known RBP	32.17	■■■□□ 2.74
EEF1D-256	ENST00000618139	ABCA9	Q8IUA7	1624 aa		32.17	■■■□□ 2.74
EEF1D-256	ENST00000618139	ARAP3	Q8WWN8	1544 aa		32.16	■■■□□ 2.74
EEF1D-256	ENST00000618139	NBPF8	Q3BBV2	869 aa		32.12	■■■□□ 2.73
EEF1D-256	ENST00000618139	FAM135A	Q9P2D6	1515 aa		32.12	■■■□□ 2.73
EEF1D-256	ENST00000618139	UNC13B	O14795	1591 aa		32.1	■■■□□ 2.73
EEF1D-256	ENST00000618139	DUOX2	Q9NRD8	1548 aa		32.08	■■■□□ 2.73
EEF1D-256	ENST00000618139	FANCA	O15360	1455 aa		32.07	■■■□□ 2.72
EEF1D-256	ENST00000618139	AFAP1	Q8N556	730 aa		32.07	■■■□□ 2.72
EEF1D-256	ENST00000618139	CENPB	P07199	599 aa	Predicted RBP	32.05	■■■□□ 2.72
EEF1D-256	ENST00000618139	HSPA5	P11021	654 aa	Known RBP	32.04	■■■□□ 2.72
EEF1D-256	ENST00000618139	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	32.03	■■■□□ 2.72	2e-9	■□□□□ 10
EEF1D-256	ENST00000618139	NPM1	P06748	294 aa	Known RBP eCLIP	32.02	■■■□□ 2.72
EEF1D-256	ENST00000618139	ZFYVE16	Q7Z3T8	1539 aa		32	■■■□□ 2.71
EEF1D-256	ENST00000618139	SPAG9	O60271	1321 aa	Known RBP	31.99	■■■□□ 2.71
EEF1D-256	ENST00000618139	ERBIN	Q96RT1	1412 aa		31.99	■■■□□ 2.71
EEF1D-256	ENST00000618139	IQGAP3	Q86VI3	1631 aa		31.99	■■■□□ 2.71
EEF1D-256	ENST00000618139	EIF4G2	P78344	907 aa	Known RBP eCLIP	31.96	■■■□□ 2.71	4e-8	■□□□□ 9.9
EEF1D-256	ENST00000618139	SCAF1	Q9H7N4	1312 aa	Known RBP	31.95	■■■□□ 2.71
EEF1D-256	ENST00000618139	ADGRL1	O94910	1474 aa		31.95	■■■□□ 2.71
EEF1D-256	ENST00000618139	RTEL1-TNFRSF6B	F6WH68	1400 aa		31.94	■■■□□ 2.7
EEF1D-256	ENST00000618139	MAGI2	Q86UL8	1455 aa		31.94	■■■□□ 2.7
EEF1D-256	ENST00000618139	SCAPER	Q9BY12	1400 aa		31.93	■■■□□ 2.7
EEF1D-256	ENST00000618139	INO80	Q9ULG1	1556 aa	Predicted RBP	31.91	■■■□□ 2.7
EEF1D-256	ENST00000618139	ATP7A	Q04656	1500 aa		31.89	■■■□□ 2.7
EEF1D-256	ENST00000618139	ZNF326	Q5BKZ1	582 aa	Known RBP	31.88	■■■□□ 2.69
EEF1D-256	ENST00000618139	WASHC2A	Q641Q2	1341 aa		31.88	■■■□□ 2.69
EEF1D-256	ENST00000618139	PLA2R1	Q13018	1463 aa		31.88	■■■□□ 2.69
EEF1D-256	ENST00000618139	SPATA31E1	Q6ZUB1	1445 aa		31.83	■■■□□ 2.69
EEF1D-256	ENST00000618139	C11orf95	C9JLR9	678 aa	Predicted RBP	31.83	■■■□□ 2.69
EEF1D-256	ENST00000618139	CD109	Q6YHK3	1445 aa		31.82	■■■□□ 2.68
EEF1D-256	ENST00000618139	CCDC144A	A2RUR9	1427 aa		31.81	■■■□□ 2.68

Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms