RNA–Protein interactions for RNA: ENST00000618061.4

CBWD1-226, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 2,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-226ENST00000618061 FOXD1Q16676 465 aa19.98■□□□□ 0.79
CBWD1-226ENST00000618061 TIMELESSQ9UNS1 1208 aa19.97■□□□□ 0.79
CBWD1-226ENST00000618061 CFDP1Q9UEE9 299 aaPredicted RBP19.97■□□□□ 0.79
CBWD1-226ENST00000618061 GTF3C3Q9Y5Q9 886 aa19.97■□□□□ 0.79
CBWD1-226ENST00000618061 DNMT1P26358 1616 aaKnown RBP19.96■□□□□ 0.79
CBWD1-226ENST00000618061 ABCA8O94911 1581 aa19.95■□□□□ 0.78
CBWD1-226ENST00000618061 GPATCH8Q9UKJ3 1502 aaKnown RBP19.94■□□□□ 0.78
CBWD1-226ENST00000618061 AKNAQ7Z591 1439 aa19.94■□□□□ 0.78
CBWD1-226ENST00000618061 CAMSAP2Q08AD1 1489 aa19.93■□□□□ 0.78
CBWD1-226ENST00000618061 MPHOSPH9Q99550 1183 aa19.93■□□□□ 0.78
CBWD1-226ENST00000618061 ATP10BO94823 1461 aa19.93■□□□□ 0.78
CBWD1-226ENST00000618061 DDX10Q13206 875 aaKnown RBP19.91■□□□□ 0.78
CBWD1-226ENST00000618061 PLEKHD1A6NEE1 506 aa19.91■□□□□ 0.78
CBWD1-226ENST00000618061 ADCY10Q96PN6 1610 aa19.91■□□□□ 0.78
CBWD1-226ENST00000618061 ITSN2Q9NZM3 1697 aa19.9■□□□□ 0.78
CBWD1-226ENST00000618061 PTPRGP23470 1445 aa19.89■□□□□ 0.77
CBWD1-226ENST00000618061 ROCK1Q13464 1354 aa19.87■□□□□ 0.77
CBWD1-226ENST00000618061 KDM5BQ9UGL1 1544 aa19.86■□□□□ 0.77
CBWD1-226ENST00000618061 CDC42BPAQ5VT25 1732 aa19.85■□□□□ 0.77
CBWD1-226ENST00000618061 KCNH8Q96L42 1107 aa19.84■□□□□ 0.77
CBWD1-226ENST00000618061 ERCC6L2Q5T890 1561 aa19.84■□□□□ 0.77
CBWD1-226ENST00000618061 ABCC10Q5T3U5 1492 aa19.82■□□□□ 0.76
CBWD1-226ENST00000618061 SLC4A1APQ9BWU0 796 aaKnown RBP19.81■□□□□ 0.76
CBWD1-226ENST00000618061 NCOA1Q15788 1441 aa19.8■□□□□ 0.76
CBWD1-226ENST00000618061 CROCC2H7BZ55 1655 aa19.79■□□□□ 0.76
CBWD1-226ENST00000618061 ADGBQ8N7X0 1667 aa19.79■□□□□ 0.76
CBWD1-226ENST00000618061 HNRNPMP52272 730 aaKnown RBP eCLIP19.77■□□□□ 0.75
CBWD1-226ENST00000618061 L3MBTL2Q969R5 705 aa19.77■□□□□ 0.75
CBWD1-226ENST00000618061 SHROOM2Q13796 1616 aa19.76■□□□□ 0.75
CBWD1-226ENST00000618061 ANKRD30BQ9BXX2 1392 aa19.74■□□□□ 0.75
CBWD1-226ENST00000618061 PZPP20742 1482 aa19.73■□□□□ 0.75
CBWD1-226ENST00000618061 ANKRD30AQ9BXX3 1397 aa19.72■□□□□ 0.75
CBWD1-226ENST00000618061 ADGRL2O95490 1459 aa19.71■□□□□ 0.75
CBWD1-226ENST00000618061 C9orf84Q5VXU9 1444 aa19.7■□□□□ 0.74
CBWD1-226ENST00000618061 CDC42BPBQ9Y5S2 1711 aa19.69■□□□□ 0.74
CBWD1-226ENST00000618061 HSPA5P11021 654 aaKnown RBP19.68■□□□□ 0.74
CBWD1-226ENST00000618061 RPRD2Q5VT52 1461 aaKnown RBP19.68■□□□□ 0.74
CBWD1-226ENST00000618061 ANKRD50Q9ULJ7 1429 aa19.68■□□□□ 0.74
CBWD1-226ENST00000618061 TSPY4P0CV99 314 aa19.67■□□□□ 0.74
CBWD1-226ENST00000618061 TSPY10P0CW01 314 aa19.67■□□□□ 0.74
CBWD1-226ENST00000618061 NBPF8Q3BBV2 869 aa19.67■□□□□ 0.74
CBWD1-226ENST00000618061 SAMD9LQ8IVG5 1584 aa19.67■□□□□ 0.74
CBWD1-226ENST00000618061 TTC37Q6PGP7 1564 aa19.66■□□□□ 0.74
CBWD1-226ENST00000618061 PKD2Q13563 968 aa19.66■□□□□ 0.74
CBWD1-226ENST00000618061 PREX2Q70Z35 1606 aa19.64■□□□□ 0.73
CBWD1-226ENST00000618061 TEX14Q8IWB6 1497 aa19.64■□□□□ 0.73
CBWD1-226ENST00000618061 MBD5Q9P267 1494 aa19.64■□□□□ 0.73
CBWD1-226ENST00000618061 ABCC2Q92887 1545 aa19.63■□□□□ 0.73
CBWD1-226ENST00000618061 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.62■□□□□ 0.73
CBWD1-226ENST00000618061 CLASP1Q7Z460 1538 aa19.62■□□□□ 0.73
CBWD1-226ENST00000618061 SHANK2Q9UPX8 1470 aa19.62■□□□□ 0.73
CBWD1-226ENST00000618061 NUP155O75694 1391 aa19.61■□□□□ 0.73
CBWD1-226ENST00000618061 KIF15Q9NS87 1388 aa19.61■□□□□ 0.73
CBWD1-226ENST00000618061 KIAA1107Q9UPP5 1409 aa19.6■□□□□ 0.73
CBWD1-226ENST00000618061 ARHGAP5Q13017 1502 aa19.6■□□□□ 0.73
CBWD1-226ENST00000618061 ANP32CO43423 234 aa19.6■□□□□ 0.73
CBWD1-226ENST00000618061 EIF4G2P78344 907 aaKnown RBP eCLIP19.6■□□□□ 0.73
CBWD1-226ENST00000618061 WASHC2AQ641Q2 1341 aa19.6■□□□□ 0.73
CBWD1-226ENST00000618061 SYCP2Q9BX26 1530 aa19.59■□□□□ 0.73
CBWD1-226ENST00000618061 ARHGEF5Q12774 1597 aa19.58■□□□□ 0.72
CBWD1-226ENST00000618061 CCDC141Q6ZP82 1450 aa19.57■□□□□ 0.72
CBWD1-226ENST00000618061 ZNF326Q5BKZ1 582 aaKnown RBP19.57■□□□□ 0.72
CBWD1-226ENST00000618061 C11orf95C9JLR9 678 aaPredicted RBP19.56■□□□□ 0.72
CBWD1-226ENST00000618061 ZCCHC11Q5TAX3 1644 aaKnown RBP19.56■□□□□ 0.72
CBWD1-226ENST00000618061 MYO5CQ9NQX4 1742 aa19.54■□□□□ 0.72
CBWD1-226ENST00000618061 ARHGEF12Q9NZN5 1544 aa19.49■□□□□ 0.71
CBWD1-226ENST00000618061 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.49■□□□□ 0.71
CBWD1-226ENST00000618061 CCER2I3L3R5 266 aa19.47■□□□□ 0.71
CBWD1-226ENST00000618061 RSPH4AQ5TD94 716 aa19.46■□□□□ 0.71
CBWD1-226ENST00000618061 KDM5DQ9BY66 1539 aa19.46■□□□□ 0.71
CBWD1-226ENST00000618061 KDM2AQ9Y2K7 1162 aa19.45■□□□□ 0.7
CBWD1-226ENST00000618061 UHRF1BP1LA0JNW5 1464 aa19.44■□□□□ 0.7
CBWD1-226ENST00000618061 CCDC7Q96M83 1385 aa19.44■□□□□ 0.7
CBWD1-226ENST00000618061 FAM135AQ9P2D6 1515 aa19.44■□□□□ 0.7
CBWD1-226ENST00000618061 SPATA31E1Q6ZUB1 1445 aa19.43■□□□□ 0.7
CBWD1-226ENST00000618061 PLCH2O75038 1416 aa19.43■□□□□ 0.7
CBWD1-226ENST00000618061 PLEKHH2Q8IVE3 1493 aa19.41■□□□□ 0.7
CBWD1-226ENST00000618061 MAST1Q9Y2H9 1570 aa19.41■□□□□ 0.7
CBWD1-226ENST00000618061 KIF7Q2M1P5 1343 aa19.4■□□□□ 0.7
CBWD1-226ENST00000618061 EFCAB2Q5VUJ9 269 aa19.4■□□□□ 0.7
CBWD1-226ENST00000618061 CNTLNQ9NXG0 1405 aa19.4■□□□□ 0.7
CBWD1-226ENST00000618061 TRAPPC8Q9Y2L5 1435 aa19.39■□□□□ 0.69
CBWD1-226ENST00000618061 DCAF11Q8TEB1 546 aa19.39■□□□□ 0.69
CBWD1-226ENST00000618061 POLR3GLQ9BT43 218 aa19.39■□□□□ 0.69
CBWD1-226ENST00000618061 USP47Q96K76 1375 aa19.37■□□□□ 0.69
CBWD1-226ENST00000618061 AFAP1Q8N556 730 aa19.36■□□□□ 0.69
CBWD1-226ENST00000618061 PLXNC1O60486 1568 aa19.36■□□□□ 0.69
CBWD1-226ENST00000618061 CNGB1Q14028 1251 aaPredicted RBP19.36■□□□□ 0.69
CBWD1-226ENST00000618061 CCDC184Q52MB2 194 aa19.36■□□□□ 0.69
CBWD1-226ENST00000618061 SUPT16HQ9Y5B9 1047 aaKnown RBP19.36■□□□□ 0.69
CBWD1-226ENST00000618061 BCORL1Q5H9F3 1711 aa19.35■□□□□ 0.69
CBWD1-226ENST00000618061 ABCC1P33527 1531 aa19.35■□□□□ 0.69
CBWD1-226ENST00000618061 RGL3Q3MIN7 710 aa19.35■□□□□ 0.69
CBWD1-226ENST00000618061 UNC13BO14795 1591 aa19.35■□□□□ 0.69
CBWD1-226ENST00000618061 POLR1AO95602 1720 aaPredicted RBP19.32■□□□□ 0.68
CBWD1-226ENST00000618061 CARD11Q9BXL7 1154 aa19.32■□□□□ 0.68
CBWD1-226ENST00000618061 KDM5CP41229 1560 aa19.32■□□□□ 0.68
CBWD1-226ENST00000618061 DUOX2Q9NRD8 1548 aa19.32■□□□□ 0.68
CBWD1-226ENST00000618061 PLA2R1Q13018 1463 aa19.31■□□□□ 0.68
CBWD1-226ENST00000618061 WDR7Q9Y4E6 1490 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms