RNA–Protein interactions for RNA: ENST00000617958.4

CPEB1-215, Transcript of cytoplasmic polyadenylation element binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene CPEB1, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB1-215ENST00000617958 TIAM1Q13009 1591 aa14.52□□□□□ -0.08
CPEB1-215ENST00000617958 NCOA2Q15596 1464 aa14.52□□□□□ -0.08
CPEB1-215ENST00000617958 CDK13Q14004 1512 aaKnown RBP14.52□□□□□ -0.08
CPEB1-215ENST00000617958 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.52□□□□□ -0.09
CPEB1-215ENST00000617958 RNF123Q5XPI4 1314 aa14.51□□□□□ -0.09
CPEB1-215ENST00000617958 PPM1GO15355 546 aaPredicted RBP14.51□□□□□ -0.09
CPEB1-215ENST00000617958 LRRIQ1Q96JM4 1722 aa14.5□□□□□ -0.09
CPEB1-215ENST00000617958 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.5□□□□□ -0.09
CPEB1-215ENST00000617958 OSCARQ8IYS5 282 aa14.49□□□□□ -0.09
CPEB1-215ENST00000617958 RTN4Q9NQC3 1192 aaKnown RBP14.49□□□□□ -0.09
CPEB1-215ENST00000617958 FMN1Q68DA7 1419 aa14.48□□□□□ -0.09
CPEB1-215ENST00000617958 SMG6Q86US8 1419 aaKnown RBP14.48□□□□□ -0.09
CPEB1-215ENST00000617958 RSPH6AQ9H0K4 717 aa14.48□□□□□ -0.09
CPEB1-215ENST00000617958 CASKIN1Q8WXD9 1431 aa14.47□□□□□ -0.09
CPEB1-215ENST00000617958 TONSLQ96HA7 1378 aa14.46□□□□□ -0.09
CPEB1-215ENST00000617958 CNTLNQ9NXG0 1405 aa14.45□□□□□ -0.1
CPEB1-215ENST00000617958 MAGI3Q5TCQ9 1506 aa14.45□□□□□ -0.1
CPEB1-215ENST00000617958 CARMIL2Q6F5E8 1435 aa14.45□□□□□ -0.1
CPEB1-215ENST00000617958 NEFMP07197 916 aa14.44□□□□□ -0.1
CPEB1-215ENST00000617958 LRRC9Q6ZRR7 1453 aa14.44□□□□□ -0.1
CPEB1-215ENST00000617958 PTPRGP23470 1445 aa14.44□□□□□ -0.1
CPEB1-215ENST00000617958 HIRIP3Q9BW71 556 aaPredicted RBP14.44□□□□□ -0.1
CPEB1-215ENST00000617958 CLASP1Q7Z460 1538 aa14.44□□□□□ -0.1
CPEB1-215ENST00000617958 PHLDB1Q86UU1 1377 aa14.43□□□□□ -0.1
CPEB1-215ENST00000617958 NUP153P49790 1475 aaKnown RBP14.43□□□□□ -0.1
CPEB1-215ENST00000617958 FYCO1Q9BQS8 1478 aa14.43□□□□□ -0.1
CPEB1-215ENST00000617958 PKNOX2Q96KN3 472 aa14.43□□□□□ -0.1
CPEB1-215ENST00000617958 KDM5BQ9UGL1 1544 aa14.42□□□□□ -0.1
CPEB1-215ENST00000617958 MTUS2Q5JR59 1369 aa14.41□□□□□ -0.1
CPEB1-215ENST00000617958 CFAP43Q8NDM7 1665 aa14.41□□□□□ -0.1
CPEB1-215ENST00000617958 EPRSP07814 1512 aaKnown RBP14.41□□□□□ -0.1
CPEB1-215ENST00000617958 GSE1Q14687 1217 aa14.39□□□□□ -0.11
CPEB1-215ENST00000617958 FAM50AQ14320 339 aaKnown RBP14.39□□□□□ -0.11
CPEB1-215ENST00000617958 TCERG1O14776 1098 aaKnown RBP14.38□□□□□ -0.11
CPEB1-215ENST00000617958 UACAQ9BZF9 1416 aa14.38□□□□□ -0.11
CPEB1-215ENST00000617958 FAM43AQ8N2R8 423 aa14.37□□□□□ -0.11
CPEB1-215ENST00000617958 SHROOM2Q13796 1616 aa14.37□□□□□ -0.11
CPEB1-215ENST00000617958 MS4A1P11836 297 aa14.37□□□□□ -0.11
CPEB1-215ENST00000617958 GLIPR1L2Q4G1C9 344 aa14.37□□□□□ -0.11
CPEB1-215ENST00000617958 PRKRIP1Q9H875 184 aaPredicted RBP14.36□□□□□ -0.11
CPEB1-215ENST00000617958 RAPGEF6Q8TEU7 1601 aa14.36□□□□□ -0.11
CPEB1-215ENST00000617958 NUDCQ9Y266 331 aa14.35□□□□□ -0.11
CPEB1-215ENST00000617958 EIF5BO60841 1220 aaKnown RBP14.34□□□□□ -0.11
CPEB1-215ENST00000617958 CYB5RLQ6IPT4 315 aa14.34□□□□□ -0.11
CPEB1-215ENST00000617958 BRPF3Q9ULD4 1205 aa14.34□□□□□ -0.11
CPEB1-215ENST00000617958 DDRGK1Q96HY6 314 aa14.34□□□□□ -0.11
CPEB1-215ENST00000617958 ATP10BO94823 1461 aa14.33□□□□□ -0.11
CPEB1-215ENST00000617958 ZNF644Q9H582 1327 aaPredicted RBP14.33□□□□□ -0.12
CPEB1-215ENST00000617958 HECW1Q76N89 1606 aa14.32□□□□□ -0.12
CPEB1-215ENST00000617958 NCOA1Q15788 1441 aa14.32□□□□□ -0.12
CPEB1-215ENST00000617958 POLR1AO95602 1720 aaPredicted RBP14.32□□□□□ -0.12
CPEB1-215ENST00000617958 AKNAQ7Z591 1439 aa14.31□□□□□ -0.12
CPEB1-215ENST00000617958 CCDC18Q5T9S5 1454 aa14.31□□□□□ -0.12
CPEB1-215ENST00000617958 ABCA8O94911 1581 aa14.31□□□□□ -0.12
CPEB1-215ENST00000617958 MRS2Q9HD23 443 aa14.31□□□□□ -0.12
CPEB1-215ENST00000617958 HFM1A2PYH4 1435 aa14.31□□□□□ -0.12
CPEB1-215ENST00000617958 CCDC184Q52MB2 194 aa14.3□□□□□ -0.12
CPEB1-215ENST00000617958 BACH2Q9BYV9 841 aa14.3□□□□□ -0.12
CPEB1-215ENST00000617958 ZNF777Q9ULD5 760 aaPredicted RBP14.29□□□□□ -0.12
CPEB1-215ENST00000617958 LAS1LQ9Y4W2 734 aaKnown RBP14.29□□□□□ -0.12
CPEB1-215ENST00000617958 HSPA5P11021 654 aaKnown RBP14.28□□□□□ -0.12
CPEB1-215ENST00000617958 CCDC7Q96M83 1385 aa14.28□□□□□ -0.12
CPEB1-215ENST00000617958 PDE4AP27815 886 aa14.28□□□□□ -0.12
CPEB1-215ENST00000617958 FAM9BQ8IZU0 186 aa14.28□□□□□ -0.12
CPEB1-215ENST00000617958 PTPN23Q9H3S7 1636 aa14.27□□□□□ -0.12
CPEB1-215ENST00000617958 EIF4G2P78344 907 aaKnown RBP eCLIP14.27□□□□□ -0.12
CPEB1-215ENST00000617958 CHIC2Q9UKJ5 165 aa14.27□□□□□ -0.13
CPEB1-215ENST00000617958 KIF14Q15058 1648 aa14.26□□□□□ -0.13
CPEB1-215ENST00000617958 PLEKHD1A6NEE1 506 aa14.26□□□□□ -0.13
CPEB1-215ENST00000617958 ARHGEF11O15085 1522 aa14.24□□□□□ -0.13
CPEB1-215ENST00000617958 NFKBIBQ15653 356 aa14.23□□□□□ -0.13
CPEB1-215ENST00000617958 FRAT1Q92837 279 aaPredicted RBP14.22□□□□□ -0.13
CPEB1-215ENST00000617958 ADCY10Q96PN6 1610 aa14.21□□□□□ -0.13
CPEB1-215ENST00000617958 EHBP1L1Q8N3D4 1523 aa14.21□□□□□ -0.13
CPEB1-215ENST00000617958 FGD6Q6ZV73 1430 aa14.21□□□□□ -0.14
CPEB1-215ENST00000617958 ABCC2Q92887 1545 aa14.21□□□□□ -0.14
CPEB1-215ENST00000617958 TROQ12816 1431 aaPredicted RBP14.2□□□□□ -0.14
CPEB1-215ENST00000617958 PTPRKQ15262 1439 aa14.2□□□□□ -0.14
CPEB1-215ENST00000617958 NPM2Q86SE8 214 aaKnown RBP14.2□□□□□ -0.14
CPEB1-215ENST00000617958 MYOM3Q5VTT5 1437 aa14.18□□□□□ -0.14
CPEB1-215ENST00000617958 SUPT6HQ7KZ85 1726 aaKnown RBP14.18□□□□□ -0.14
CPEB1-215ENST00000617958 NAIPQ13075 1403 aa14.17□□□□□ -0.14
CPEB1-215ENST00000617958 RRP7BPQ9NSQ0 103 aa14.17□□□□□ -0.14
CPEB1-215ENST00000617958 CFDP1Q9UEE9 299 aaPredicted RBP14.17□□□□□ -0.14
CPEB1-215ENST00000617958 ZCCHC11Q5TAX3 1644 aaKnown RBP14.16□□□□□ -0.14
CPEB1-215ENST00000617958 RIMBP3CA6NJZ7 1639 aa14.16□□□□□ -0.14
CPEB1-215ENST00000617958 RIMBP3BA6NNM3 1639 aa14.16□□□□□ -0.14
CPEB1-215ENST00000617958 RIMBP3Q9UFD9 1639 aa14.16□□□□□ -0.14
CPEB1-215ENST00000617958 RRP1P56182 461 aaKnown RBP14.15□□□□□ -0.14
CPEB1-215ENST00000617958 SPATA31E1Q6ZUB1 1445 aa14.15□□□□□ -0.14
CPEB1-215ENST00000617958 RRP9O43818 475 aaKnown RBP14.14□□□□□ -0.15
CPEB1-215ENST00000617958 HNRNPMP52272 730 aaKnown RBP eCLIP14.14□□□□□ -0.152e-6■■■□□ 15.8
CPEB1-215ENST00000617958 ZMYND15Q9H091 742 aa14.14□□□□□ -0.15
CPEB1-215ENST00000617958 GPATCH8Q9UKJ3 1502 aaKnown RBP14.13□□□□□ -0.15
CPEB1-215ENST00000617958 GCC2Q8IWJ2 1684 aa14.12□□□□□ -0.15
CPEB1-215ENST00000617958 DHX29Q7Z478 1369 aaKnown RBP14.11□□□□□ -0.15
CPEB1-215ENST00000617958 MIA2Q96PC5 1412 aa14.11□□□□□ -0.15
CPEB1-215ENST00000617958 TTC37Q6PGP7 1564 aa14.11□□□□□ -0.15
CPEB1-215ENST00000617958 ASXL2Q76L83 1435 aa14.1□□□□□ -0.15
CPEB1-215ENST00000617958 NPM1P06748 294 aaKnown RBP eCLIP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms