RNA–Protein interactions for RNA: ENST00000617769.1

PCDHA13-203, Transcript of protocadherin alpha 13, humanhuman

APPRIS ALT2 BASIC

Gene PCDHA13, Length 2,427 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-203ENST00000617769 TONSLQ96HA7 1378 aa28.32■■■□□ 2.12
PCDHA13-203ENST00000617769 KIF14Q15058 1648 aa28.3■■■□□ 2.12
PCDHA13-203ENST00000617769 DAPK1P53355 1430 aa28.3■■■□□ 2.12
PCDHA13-203ENST00000617769 CHD1O14646 1710 aa28.29■■■□□ 2.12
PCDHA13-203ENST00000617769 ABCC5O15440 1437 aa28.29■■■□□ 2.12
PCDHA13-203ENST00000617769 PLEKHD1A6NEE1 506 aa28.27■■■□□ 2.12
PCDHA13-203ENST00000617769 ABCA8O94911 1581 aa28.26■■■□□ 2.11
PCDHA13-203ENST00000617769 ATP10BO94823 1461 aa28.26■■■□□ 2.11
PCDHA13-203ENST00000617769 PTPRGP23470 1445 aa28.25■■■□□ 2.11
PCDHA13-203ENST00000617769 GPATCH8Q9UKJ3 1502 aaKnown RBP28.24■■■□□ 2.11
PCDHA13-203ENST00000617769 GCC2Q8IWJ2 1684 aa28.24■■■□□ 2.11
PCDHA13-203ENST00000617769 FOXD1Q16676 465 aa28.23■■■□□ 2.11
PCDHA13-203ENST00000617769 DENND4BO75064 1496 aaPredicted RBP28.2■■■□□ 2.1
PCDHA13-203ENST00000617769 AKNAQ7Z591 1439 aa28.2■■■□□ 2.1
PCDHA13-203ENST00000617769 CAMSAP2Q08AD1 1489 aa28.2■■■□□ 2.1
PCDHA13-203ENST00000617769 DNMT1P26358 1616 aaKnown RBP28.19■■■□□ 2.1
PCDHA13-203ENST00000617769 MPHOSPH9Q99550 1183 aa28.19■■■□□ 2.1
PCDHA13-203ENST00000617769 ANP32CO43423 234 aa28.16■■■□□ 2.1
PCDHA13-203ENST00000617769 ROCK1Q13464 1354 aa28.13■■■□□ 2.09
PCDHA13-203ENST00000617769 ERCC6L2Q5T890 1561 aa28.13■■■□□ 2.09
PCDHA13-203ENST00000617769 ADCY10Q96PN6 1610 aa28.12■■■□□ 2.09
PCDHA13-203ENST00000617769 CCER2I3L3R5 266 aa28.12■■■□□ 2.09
PCDHA13-203ENST00000617769 ITSN2Q9NZM3 1697 aa28.1■■■□□ 2.09
PCDHA13-203ENST00000617769 KDM5BQ9UGL1 1544 aa28.08■■■□□ 2.09
PCDHA13-203ENST00000617769 ABCC10Q5T3U5 1492 aa28.06■■■□□ 2.08
PCDHA13-203ENST00000617769 SLC4A1APQ9BWU0 796 aaKnown RBP28.03■■■□□ 2.08
PCDHA13-203ENST00000617769 NCOA1Q15788 1441 aa28.03■■■□□ 2.08
PCDHA13-203ENST00000617769 CDC42BPAQ5VT25 1732 aa28.03■■■□□ 2.08
PCDHA13-203ENST00000617769 BCANQ96GW7 911 aa28.02■■■□□ 2.08
PCDHA13-203ENST00000617769 HNRNPMP52272 730 aaKnown RBP eCLIP28.01■■■□□ 2.07
PCDHA13-203ENST00000617769 SHROOM2Q13796 1616 aa28.01■■■□□ 2.07
PCDHA13-203ENST00000617769 MYT1Q01538 1121 aa28.01■■■□□ 2.07
PCDHA13-203ENST00000617769 FKBP8Q14318 412 aa28.01■■■□□ 2.07
PCDHA13-203ENST00000617769 TSHZ2Q9NRE2 1034 aa27.99■■■□□ 2.07
PCDHA13-203ENST00000617769 L3MBTL2Q969R5 705 aa27.94■■■□□ 2.06
PCDHA13-203ENST00000617769 ANKRD30AQ9BXX3 1397 aa27.93■■■□□ 2.06
PCDHA13-203ENST00000617769 ANKRD30BQ9BXX2 1392 aa27.92■■■□□ 2.06
PCDHA13-203ENST00000617769 CROCC2H7BZ55 1655 aa27.9■■■□□ 2.06
PCDHA13-203ENST00000617769 TSPY4P0CV99 314 aa27.9■■■□□ 2.06
PCDHA13-203ENST00000617769 TSPY10P0CW01 314 aa27.9■■■□□ 2.06
PCDHA13-203ENST00000617769 HSPA5P11021 654 aaKnown RBP27.9■■■□□ 2.06
PCDHA13-203ENST00000617769 ADGBQ8N7X0 1667 aa27.9■■■□□ 2.06
PCDHA13-203ENST00000617769 ADGRL2O95490 1459 aa27.89■■■□□ 2.05
PCDHA13-203ENST00000617769 C9orf84Q5VXU9 1444 aa27.89■■■□□ 2.05
PCDHA13-203ENST00000617769 PZPP20742 1482 aa27.88■■■□□ 2.05
PCDHA13-203ENST00000617769 WASHC2AQ641Q2 1341 aa27.87■■■□□ 2.05
PCDHA13-203ENST00000617769 ANKRD50Q9ULJ7 1429 aa27.87■■■□□ 2.05
PCDHA13-203ENST00000617769 CLASP1Q7Z460 1538 aa27.85■■■□□ 2.05
PCDHA13-203ENST00000617769 ABCC2Q92887 1545 aa27.85■■■□□ 2.05
PCDHA13-203ENST00000617769 NEFLP07196 543 aa27.84■■■□□ 2.05
PCDHA13-203ENST00000617769 PKD2Q13563 968 aa27.82■■■□□ 2.04
PCDHA13-203ENST00000617769 CDC42BPBQ9Y5S2 1711 aa27.82■■■□□ 2.04
PCDHA13-203ENST00000617769 MBD5Q9P267 1494 aa27.81■■■□□ 2.04
PCDHA13-203ENST00000617769 TTC37Q6PGP7 1564 aa27.81■■■□□ 2.04
PCDHA13-203ENST00000617769 EIF4G2P78344 907 aaKnown RBP eCLIP27.81■■■□□ 2.04
PCDHA13-203ENST00000617769 SAMD9LQ8IVG5 1584 aa27.81■■■□□ 2.04
PCDHA13-203ENST00000617769 RPRD2Q5VT52 1461 aaKnown RBP27.8■■■□□ 2.04
PCDHA13-203ENST00000617769 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.79■■■□□ 2.04
PCDHA13-203ENST00000617769 NBPF8Q3BBV2 869 aa27.78■■■□□ 2.04
PCDHA13-203ENST00000617769 NUP155O75694 1391 aa27.77■■■□□ 2.04
PCDHA13-203ENST00000617769 KIF15Q9NS87 1388 aa27.77■■■□□ 2.04
PCDHA13-203ENST00000617769 PREX2Q70Z35 1606 aa27.77■■■□□ 2.04
PCDHA13-203ENST00000617769 SHANK2Q9UPX8 1470 aa27.76■■■□□ 2.03
PCDHA13-203ENST00000617769 ARHGAP5Q13017 1502 aa27.76■■■□□ 2.03
PCDHA13-203ENST00000617769 HNRNPUQ00839 825 aaKnown RBP eCLIP27.73■■■□□ 2.03
PCDHA13-203ENST00000617769 KIAA1107Q9UPP5 1409 aa27.72■■■□□ 2.03
PCDHA13-203ENST00000617769 SYCP2Q9BX26 1530 aa27.72■■■□□ 2.03
PCDHA13-203ENST00000617769 CCDC141Q6ZP82 1450 aa27.71■■■□□ 2.03
PCDHA13-203ENST00000617769 TEX14Q8IWB6 1497 aa27.71■■■□□ 2.03
PCDHA13-203ENST00000617769 ARHGEF5Q12774 1597 aa27.7■■■□□ 2.02
PCDHA13-203ENST00000617769 ZCCHC11Q5TAX3 1644 aaKnown RBP27.69■■■□□ 2.02
PCDHA13-203ENST00000617769 C11orf95C9JLR9 678 aaPredicted RBP27.69■■■□□ 2.02
PCDHA13-203ENST00000617769 ZNF326Q5BKZ1 582 aaKnown RBP27.67■■■□□ 2.02
PCDHA13-203ENST00000617769 CNTLNQ9NXG0 1405 aa27.67■■■□□ 2.02
PCDHA13-203ENST00000617769 RSPH4AQ5TD94 716 aa27.63■■■□□ 2.01
PCDHA13-203ENST00000617769 CCDC7Q96M83 1385 aa27.62■■■□□ 2.01
PCDHA13-203ENST00000617769 UHRF1BP1LA0JNW5 1464 aa27.61■■■□□ 2.01
PCDHA13-203ENST00000617769 CCDC184Q52MB2 194 aa27.61■■■□□ 2.01
PCDHA13-203ENST00000617769 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.61■■■□□ 2.01
PCDHA13-203ENST00000617769 MYO5CQ9NQX4 1742 aa27.61■■■□□ 2.01
PCDHA13-203ENST00000617769 ARHGEF12Q9NZN5 1544 aa27.61■■■□□ 2.01
PCDHA13-203ENST00000617769 PLCH2O75038 1416 aa27.57■■■□□ 2
PCDHA13-203ENST00000617769 EFCAB2Q5VUJ9 269 aa27.56■■■□□ 2
PCDHA13-203ENST00000617769 PRKRIP1Q9H875 184 aaPredicted RBP27.56■■■□□ 2
PCDHA13-203ENST00000617769 SPATA31E1Q6ZUB1 1445 aa27.53■■■□□ 2
PCDHA13-203ENST00000617769 KDM2AQ9Y2K7 1162 aa27.51■■■□□ 2
PCDHA13-203ENST00000617769 IRX6P78412 446 aaPredicted RBP27.5■■□□□ 1.99
PCDHA13-203ENST00000617769 KIF7Q2M1P5 1343 aa27.5■■□□□ 1.99
PCDHA13-203ENST00000617769 KDM5DQ9BY66 1539 aa27.5■■□□□ 1.99
PCDHA13-203ENST00000617769 PLEKHH2Q8IVE3 1493 aa27.49■■□□□ 1.99
PCDHA13-203ENST00000617769 TRAPPC8Q9Y2L5 1435 aa27.49■■□□□ 1.99
PCDHA13-203ENST00000617769 FAM135AQ9P2D6 1515 aa27.48■■□□□ 1.99
PCDHA13-203ENST00000617769 AFAP1Q8N556 730 aa27.48■■□□□ 1.99
PCDHA13-203ENST00000617769 FAM9BQ8IZU0 186 aa27.47■■□□□ 1.99
PCDHA13-203ENST00000617769 RBM19Q9Y4C8 960 aaKnown RBP27.47■■□□□ 1.99
PCDHA13-203ENST00000617769 MRS2Q9HD23 443 aa27.46■■□□□ 1.99
PCDHA13-203ENST00000617769 OSCARQ8IYS5 282 aa27.45■■□□□ 1.98
PCDHA13-203ENST00000617769 MAST1Q9Y2H9 1570 aa27.45■■□□□ 1.98
PCDHA13-203ENST00000617769 DCAF11Q8TEB1 546 aa27.43■■□□□ 1.98
PCDHA13-203ENST00000617769 POLR1AO95602 1720 aaPredicted RBP27.42■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms