RNA–Protein interactions for RNA: ENST00000616179.4

SYNRG-223, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SYNRG, Length 4,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-223ENST00000616179 CDCA7LQ96GN5 454 aa20.35■□□□□ 0.85
SYNRG-223ENST00000616179 SMARCA4P51532 1647 aa20.35■□□□□ 0.85
SYNRG-223ENST00000616179 ARID3AQ99856 593 aa20.34■□□□□ 0.85
SYNRG-223ENST00000616179 EIF4G1Q04637 1599 aaKnown RBP20.34■□□□□ 0.85
SYNRG-223ENST00000616179 CARMIL1Q5VZK9 1371 aa20.33■□□□□ 0.85
SYNRG-223ENST00000616179 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.33■□□□□ 0.85
SYNRG-223ENST00000616179 FHAD1B1AJZ9 1412 aa20.32■□□□□ 0.84
SYNRG-223ENST00000616179 L1TD1Q5T7N2 865 aaKnown RBP20.32■□□□□ 0.84
SYNRG-223ENST00000616179 SMG6Q86US8 1419 aaKnown RBP20.3■□□□□ 0.84
SYNRG-223ENST00000616179 FHOD3Q2V2M9 1422 aa20.3■□□□□ 0.84
SYNRG-223ENST00000616179 WDR43Q15061 677 aaKnown RBP eCLIP20.29■□□□□ 0.84
SYNRG-223ENST00000616179 FAM43AQ8N2R8 423 aa20.29■□□□□ 0.84
SYNRG-223ENST00000616179 LRRC9Q6ZRR7 1453 aa20.29■□□□□ 0.84
SYNRG-223ENST00000616179 FMN1Q68DA7 1419 aa20.29■□□□□ 0.84
SYNRG-223ENST00000616179 NBPF8Q3BBV2 869 aa20.29■□□□□ 0.84
SYNRG-223ENST00000616179 CUX2O14529 1486 aa20.28■□□□□ 0.84
SYNRG-223ENST00000616179 FAM161AQ3B820 660 aa20.27■□□□□ 0.84
SYNRG-223ENST00000616179 WASHC2CQ9Y4E1 1318 aa20.25■□□□□ 0.83
SYNRG-223ENST00000616179 POGKQ9P215 609 aa20.25■□□□□ 0.83
SYNRG-223ENST00000616179 GOLGA6L3A6NEY3 463 aa20.24■□□□□ 0.83
SYNRG-223ENST00000616179 RGL3Q3MIN7 710 aa20.24■□□□□ 0.83
SYNRG-223ENST00000616179 UACAQ9BZF9 1416 aa20.24■□□□□ 0.83
SYNRG-223ENST00000616179 PNISRQ8TF01 805 aaKnown RBP20.23■□□□□ 0.83
SYNRG-223ENST00000616179 ZMYND15Q9H091 742 aa20.22■□□□□ 0.83
SYNRG-223ENST00000616179 ANP32BQ92688 251 aaKnown RBP20.22■□□□□ 0.83
SYNRG-223ENST00000616179 PRXQ9BXM0 1461 aa20.21■□□□□ 0.83
SYNRG-223ENST00000616179 DCAF11Q8TEB1 546 aa20.17■□□□□ 0.82
SYNRG-223ENST00000616179 ST20-MTHFSA0A0A6YYL1 179 aa20.16■□□□□ 0.82
SYNRG-223ENST00000616179 NEUROD2Q15784 382 aa20.15■□□□□ 0.82
SYNRG-223ENST00000616179 C20orf194Q5TEA3 1177 aa20.14■□□□□ 0.81
SYNRG-223ENST00000616179 CENPQQ7L2Z9 268 aaPredicted RBP20.14■□□□□ 0.81
SYNRG-223ENST00000616179 MYBBP1AQ9BQG0 1328 aaKnown RBP20.13■□□□□ 0.81
SYNRG-223ENST00000616179 FGD6Q6ZV73 1430 aa20.13■□□□□ 0.81
SYNRG-223ENST00000616179 ZBTB7CA1YPR0 619 aa20.13■□□□□ 0.81
SYNRG-223ENST00000616179 RALBP1Q15311 655 aa20.13■□□□□ 0.81
SYNRG-223ENST00000616179 NLRP13Q86W25 1043 aa20.12■□□□□ 0.81
SYNRG-223ENST00000616179 PDE3BQ13370 1112 aa20.12■□□□□ 0.81
SYNRG-223ENST00000616179 MYH16Q9H6N6 1097 aa20.12■□□□□ 0.81
SYNRG-223ENST00000616179 USP47Q96K76 1375 aa20.11■□□□□ 0.81
SYNRG-223ENST00000616179 PKD2Q13563 968 aa20.1■□□□□ 0.81
SYNRG-223ENST00000616179 NCLP19338 710 aaKnown RBP20.09■□□□□ 0.81
SYNRG-223ENST00000616179 A0A0U1RQG5 324 aaPredicted RBP20.09■□□□□ 0.81
SYNRG-223ENST00000616179 TIAM1Q13009 1591 aa20.08■□□□□ 0.81
SYNRG-223ENST00000616179 KTN1Q86UP2 1357 aaKnown RBP20.07■□□□□ 0.8
SYNRG-223ENST00000616179 ERICH3Q5RHP9 1530 aa20.07■□□□□ 0.8
SYNRG-223ENST00000616179 RRAGDQ9NQL2 400 aaPredicted RBP20.07■□□□□ 0.8
SYNRG-223ENST00000616179 IGF1RP08069 1367 aa20.07■□□□□ 0.8
SYNRG-223ENST00000616179 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.06■□□□□ 0.83e-6■■□□□ 11.4
SYNRG-223ENST00000616179 CCDC146Q8IYE0 955 aa20.06■□□□□ 0.8
SYNRG-223ENST00000616179 KIF15Q9NS87 1388 aa20.05■□□□□ 0.8
SYNRG-223ENST00000616179 PODXL2Q9NZ53 605 aa20.03■□□□□ 0.8
SYNRG-223ENST00000616179 FOXD4L1Q9NU39 408 aa20.01■□□□□ 0.79
SYNRG-223ENST00000616179 NCOA1Q15788 1441 aa20.01■□□□□ 0.79
SYNRG-223ENST00000616179 AQRO60306 1485 aaKnown RBP eCLIP20■□□□□ 0.793e-7■■■■■ 29
SYNRG-223ENST00000616179 MFAP1P55081 439 aaKnown RBP20■□□□□ 0.79
SYNRG-223ENST00000616179 KNSTRNQ9Y448 316 aa20■□□□□ 0.79
SYNRG-223ENST00000616179 HFM1A2PYH4 1435 aa19.99■□□□□ 0.79
SYNRG-223ENST00000616179 NAIPQ13075 1403 aa19.99■□□□□ 0.79
SYNRG-223ENST00000616179 GOLGA2Q08379 1002 aa19.99■□□□□ 0.79
SYNRG-223ENST00000616179 PANK2Q9BZ23 570 aa19.99■□□□□ 0.79
SYNRG-223ENST00000616179 CLUAP1Q96AJ1 413 aa19.98■□□□□ 0.79
SYNRG-223ENST00000616179 COG6Q9Y2V7 657 aa19.97■□□□□ 0.79
SYNRG-223ENST00000616179 MSNP26038 577 aaKnown RBP19.97■□□□□ 0.79
SYNRG-223ENST00000616179 RBM10P98175 930 aaKnown RBP19.97■□□□□ 0.79
SYNRG-223ENST00000616179 ATAD2BQ9ULI0 1458 aa19.96■□□□□ 0.79
SYNRG-223ENST00000616179 FAM13BQ9NYF5 915 aa19.96■□□□□ 0.79
SYNRG-223ENST00000616179 RNF123Q5XPI4 1314 aa19.95■□□□□ 0.78
SYNRG-223ENST00000616179 PTPRKQ15262 1439 aa19.95■□□□□ 0.78
SYNRG-223ENST00000616179 HSCBQ8IWL3 235 aa19.94■□□□□ 0.78
SYNRG-223ENST00000616179 HSP90AB1P08238 724 aaKnown RBP19.94■□□□□ 0.78
SYNRG-223ENST00000616179 RRP9O43818 475 aaKnown RBP19.94■□□□□ 0.78
SYNRG-223ENST00000616179 CFDP1Q9UEE9 299 aaPredicted RBP19.93■□□□□ 0.78
SYNRG-223ENST00000616179 PANK3Q9H999 370 aa19.93■□□□□ 0.78
SYNRG-223ENST00000616179 TNNT2P45379 298 aaPredicted RBP19.92■□□□□ 0.78
SYNRG-223ENST00000616179 ADAMTS8Q9UP79 889 aa19.92■□□□□ 0.78
SYNRG-223ENST00000616179 BCL2L13Q9BXK5 485 aa19.92■□□□□ 0.78
SYNRG-223ENST00000616179 TRAK2O60296 914 aa19.91■□□□□ 0.78
SYNRG-223ENST00000616179 TPRNQ4KMQ1 711 aa19.91■□□□□ 0.78
SYNRG-223ENST00000616179 ZNF644Q9H582 1327 aaPredicted RBP19.9■□□□□ 0.78
SYNRG-223ENST00000616179 AMER1Q5JTC6 1135 aaPredicted RBP19.9■□□□□ 0.78
SYNRG-223ENST00000616179 DNTTIP2Q5QJE6 756 aaKnown RBP19.9■□□□□ 0.78
SYNRG-223ENST00000616179 BRD4O60885 1362 aaPredicted RBP19.9■□□□□ 0.78
SYNRG-223ENST00000616179 ROCK2O75116 1388 aaKnown RBP19.9■□□□□ 0.78
SYNRG-223ENST00000616179 XRCC6P12956 609 aaKnown RBP eCLIP19.9■□□□□ 0.78
SYNRG-223ENST00000616179 C8orf34Q49A92 452 aa19.89■□□□□ 0.78
SYNRG-223ENST00000616179 TOP2BQ02880 1626 aa19.88■□□□□ 0.77
SYNRG-223ENST00000616179 BCAR3O75815 825 aa19.88■□□□□ 0.77
SYNRG-223ENST00000616179 MYOM3Q5VTT5 1437 aa19.88■□□□□ 0.77
SYNRG-223ENST00000616179 GOLGA6L22H0YM25 854 aa19.87■□□□□ 0.77
SYNRG-223ENST00000616179 PANK1Q8TE04 598 aa19.87■□□□□ 0.77
SYNRG-223ENST00000616179 ESPNB1AK53 854 aa19.87■□□□□ 0.77
SYNRG-223ENST00000616179 MAP3K1Q13233 1512 aa19.87■□□□□ 0.77
SYNRG-223ENST00000616179 CFTRP13569 1480 aa19.86■□□□□ 0.77
SYNRG-223ENST00000616179 TSPY4P0CV99 314 aa19.86■□□□□ 0.77
SYNRG-223ENST00000616179 TSPY10P0CW01 314 aa19.86■□□□□ 0.77
SYNRG-223ENST00000616179 FTSJ3Q8IY81 847 aaKnown RBP19.85■□□□□ 0.77
SYNRG-223ENST00000616179 MRE11P49959 708 aa19.85■□□□□ 0.77
SYNRG-223ENST00000616179 APAF1O14727 1248 aa19.84■□□□□ 0.77
SYNRG-223ENST00000616179 PTMAP06454 111 aaKnown RBP19.84■□□□□ 0.77
SYNRG-223ENST00000616179 NCOA2Q15596 1464 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms