RNA–Protein interactions for RNA: ENST00000615940.4

LRTOMT-222, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, human

TSL 5 BASIC

Gene LRTOMT, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRTOMT-222	ENST00000615940	PUS7	Q96PZ0	661 aa	Known RBP	13.68	□□□□□ -0.22
LRTOMT-222	ENST00000615940	RBM10	P98175	930 aa	Known RBP	13.67	□□□□□ -0.22
LRTOMT-222	ENST00000615940	POLR3GL	Q9BT43	218 aa		13.67	□□□□□ -0.22
LRTOMT-222	ENST00000615940	ARHGAP35	Q9NRY4	1499 aa		13.65	□□□□□ -0.22
LRTOMT-222	ENST00000615940	CCDC9	Q9Y3X0	531 aa	Known RBP	13.65	□□□□□ -0.22
LRTOMT-222	ENST00000615940	FHOD3	Q2V2M9	1422 aa		13.65	□□□□□ -0.22
LRTOMT-222	ENST00000615940	EFCAB5	A4FU69	1503 aa		13.63	□□□□□ -0.23
LRTOMT-222	ENST00000615940	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	13.63	□□□□□ -0.23
LRTOMT-222	ENST00000615940	PTPRG	P23470	1445 aa		13.62	□□□□□ -0.23
LRTOMT-222	ENST00000615940	CLIP1	P30622	1438 aa		13.61	□□□□□ -0.23
LRTOMT-222	ENST00000615940	CEP162	Q5TB80	1403 aa		13.61	□□□□□ -0.23
LRTOMT-222	ENST00000615940	KDM2A	Q9Y2K7	1162 aa		13.61	□□□□□ -0.23
LRTOMT-222	ENST00000615940	ADCY10	Q96PN6	1610 aa		13.61	□□□□□ -0.23
LRTOMT-222	ENST00000615940	PLB1	Q6P1J6	1458 aa		13.58	□□□□□ -0.23
LRTOMT-222	ENST00000615940	ABCA8	O94911	1581 aa		13.55	□□□□□ -0.24
LRTOMT-222	ENST00000615940	PHF23	Q9BUL5	403 aa	Predicted RBP	13.55	□□□□□ -0.24
LRTOMT-222	ENST00000615940	RAPGEF6	Q8TEU7	1601 aa		13.55	□□□□□ -0.24
LRTOMT-222	ENST00000615940	UACA	Q9BZF9	1416 aa		13.54	□□□□□ -0.24
LRTOMT-222	ENST00000615940	LRRIQ1	Q96JM4	1722 aa		13.54	□□□□□ -0.24
LRTOMT-222	ENST00000615940	ABCC2	Q92887	1545 aa		13.54	□□□□□ -0.24
LRTOMT-222	ENST00000615940	ZMYND15	Q9H091	742 aa		13.53	□□□□□ -0.24
LRTOMT-222	ENST00000615940	ARID3C	A6NKF2	412 aa		13.53	□□□□□ -0.24
LRTOMT-222	ENST00000615940	DEK	P35659	375 aa	Known RBP	13.52	□□□□□ -0.25
LRTOMT-222	ENST00000615940	ZCCHC11	Q5TAX3	1644 aa	Known RBP	13.51	□□□□□ -0.25
LRTOMT-222	ENST00000615940	TICAM2	Q86XR7	235 aa		13.51	□□□□□ -0.25
LRTOMT-222	ENST00000615940	PCF11	O94913	1555 aa	Known RBP	13.51	□□□□□ -0.25
LRTOMT-222	ENST00000615940	PPARGC1B	Q86YN6	1023 aa	Known RBP	13.5	□□□□□ -0.25
LRTOMT-222	ENST00000615940	UHRF1BP1L	A0JNW5	1464 aa		13.5	□□□□□ -0.25
LRTOMT-222	ENST00000615940	FMN1	Q68DA7	1419 aa		13.49	□□□□□ -0.25
LRTOMT-222	ENST00000615940	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	13.48	□□□□□ -0.25
LRTOMT-222	ENST00000615940	NUP153	P49790	1475 aa	Known RBP	13.48	□□□□□ -0.25
LRTOMT-222	ENST00000615940	ATP1B4	Q9UN42	357 aa	Predicted RBP	13.48	□□□□□ -0.25
LRTOMT-222	ENST00000615940	IRX6	P78412	446 aa	Predicted RBP	13.46	□□□□□ -0.25
LRTOMT-222	ENST00000615940	NEUROD1	Q13562	356 aa		13.46	□□□□□ -0.25
LRTOMT-222	ENST00000615940	CFAP44	Q96MT7	982 aa		13.46	□□□□□ -0.25
LRTOMT-222	ENST00000615940	KDM5B	Q9UGL1	1544 aa		13.46	□□□□□ -0.26
LRTOMT-222	ENST00000615940	HECW1	Q76N89	1606 aa		13.46	□□□□□ -0.26
LRTOMT-222	ENST00000615940	CDK13	Q14004	1512 aa	Known RBP	13.45	□□□□□ -0.26
LRTOMT-222	ENST00000615940	ARID3A	Q99856	593 aa		13.45	□□□□□ -0.26
LRTOMT-222	ENST00000615940	CLSTN1	O94985	981 aa		13.44	□□□□□ -0.26
LRTOMT-222	ENST00000615940	ATP10B	O94823	1461 aa		13.44	□□□□□ -0.26
LRTOMT-222	ENST00000615940	KIF13A	Q9H1H9	1805 aa		13.43	□□□□□ -0.26
LRTOMT-222	ENST00000615940	NPM1	P06748	294 aa	Known RBP eCLIP	13.43	□□□□□ -0.26
LRTOMT-222	ENST00000615940	CASKIN1	Q8WXD9	1431 aa		13.42	□□□□□ -0.26
LRTOMT-222	ENST00000615940	EPRS	P07814	1512 aa	Known RBP	13.41	□□□□□ -0.26
LRTOMT-222	ENST00000615940	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	13.41	□□□□□ -0.26
LRTOMT-222	ENST00000615940	NCL	P19338	710 aa	Known RBP	13.41	□□□□□ -0.26
LRTOMT-222	ENST00000615940	HNRNPUL2	Q1KMD3	747 aa	Known RBP	13.41	□□□□□ -0.26
LRTOMT-222	ENST00000615940	VPS8	Q8N3P4	1428 aa		13.41	□□□□□ -0.26
LRTOMT-222	ENST00000615940	FYCO1	Q9BQS8	1478 aa		13.41	□□□□□ -0.26
LRTOMT-222	ENST00000615940	MAPKBP1	O60336	1514 aa		13.41	□□□□□ -0.26
LRTOMT-222	ENST00000615940	ASXL2	Q76L83	1435 aa		13.4	□□□□□ -0.26
LRTOMT-222	ENST00000615940	TSPOAP1	O95153	1857 aa		13.38	□□□□□ -0.27
LRTOMT-222	ENST00000615940	NAP1L2	Q9ULW6	460 aa	Predicted RBP	13.38	□□□□□ -0.27
LRTOMT-222	ENST00000615940	TEX2	Q8IWB9	1127 aa		13.37	□□□□□ -0.27
LRTOMT-222	ENST00000615940	BRPF3	Q9ULD4	1205 aa		13.37	□□□□□ -0.27
LRTOMT-222	ENST00000615940	CHRM1	P11229	460 aa	Predicted RBP	13.36	□□□□□ -0.27
LRTOMT-222	ENST00000615940	DIP2B	Q9P265	1576 aa		13.35	□□□□□ -0.27
LRTOMT-222	ENST00000615940	CFAP43	Q8NDM7	1665 aa		13.35	□□□□□ -0.27
LRTOMT-222	ENST00000615940	WDR7	Q9Y4E6	1490 aa		13.35	□□□□□ -0.27
LRTOMT-222	ENST00000615940	ZNF592	Q92610	1267 aa		13.35	□□□□□ -0.27
LRTOMT-222	ENST00000615940	MAGI3	Q5TCQ9	1506 aa		13.34	□□□□□ -0.27
LRTOMT-222	ENST00000615940	TRH	P20396	242 aa	Predicted RBP	13.34	□□□□□ -0.27
LRTOMT-222	ENST00000615940	KCNH8	Q96L42	1107 aa		13.34	□□□□□ -0.27
LRTOMT-222	ENST00000615940	CCDC18	Q5T9S5	1454 aa		13.34	□□□□□ -0.27
LRTOMT-222	ENST00000615940	ABCC10	Q5T3U5	1492 aa		13.32	□□□□□ -0.28
LRTOMT-222	ENST00000615940	KIF14	Q15058	1648 aa		13.32	□□□□□ -0.28
LRTOMT-222	ENST00000615940	TIAM1	Q13009	1591 aa		13.32	□□□□□ -0.28
LRTOMT-222	ENST00000615940	IPO4	Q8TEX9	1081 aa	Known RBP	13.31	□□□□□ -0.28
LRTOMT-222	ENST00000615940	PSMD1	Q99460	953 aa		13.31	□□□□□ -0.28
LRTOMT-222	ENST00000615940	PLEKHD1	A6NEE1	506 aa		13.3	□□□□□ -0.28
LRTOMT-222	ENST00000615940	FAM69C	Q0P6D2	419 aa		13.3	□□□□□ -0.28
LRTOMT-222	ENST00000615940	ZFP91	Q96JP5	570 aa	Predicted RBP	13.3	□□□□□ -0.28
LRTOMT-222	ENST00000615940	TTC37	Q6PGP7	1564 aa		13.28	□□□□□ -0.28
LRTOMT-222	ENST00000615940	PPRC1	Q5VV67	1664 aa	Known RBP	13.28	□□□□□ -0.28
LRTOMT-222	ENST00000615940	MAP3K4	Q9Y6R4	1608 aa		13.27	□□□□□ -0.28
LRTOMT-222	ENST00000615940	TRO	Q12816	1431 aa	Predicted RBP	13.27	□□□□□ -0.29
LRTOMT-222	ENST00000615940	GLI2	P10070	1586 aa		13.27	□□□□□ -0.29
LRTOMT-222	ENST00000615940	ABCA9	Q8IUA7	1624 aa		13.26	□□□□□ -0.29
LRTOMT-222	ENST00000615940	ZBTB7C	A1YPR0	619 aa		13.26	□□□□□ -0.29
LRTOMT-222	ENST00000615940	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	13.26	□□□□□ -0.29
LRTOMT-222	ENST00000615940	KANK4	Q5T7N3	995 aa	Predicted RBP	13.25	□□□□□ -0.29
LRTOMT-222	ENST00000615940	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	13.25	□□□□□ -0.29
LRTOMT-222	ENST00000615940	MTUS2	Q5JR59	1369 aa		13.25	□□□□□ -0.29
LRTOMT-222	ENST00000615940	CNPY4	Q8N129	248 aa		13.25	□□□□□ -0.29
LRTOMT-222	ENST00000615940	CDC42BPA	Q5VT25	1732 aa		13.24	□□□□□ -0.29
LRTOMT-222	ENST00000615940	MYO5C	Q9NQX4	1742 aa		13.24	□□□□□ -0.29
LRTOMT-222	ENST00000615940	EHBP1L1	Q8N3D4	1523 aa		13.24	□□□□□ -0.29
LRTOMT-222	ENST00000615940	LRRC9	Q6ZRR7	1453 aa		13.23	□□□□□ -0.29
LRTOMT-222	ENST00000615940	MAP3K1	Q13233	1512 aa		13.23	□□□□□ -0.29
LRTOMT-222	ENST00000615940	CDC42BPB	Q9Y5S2	1711 aa		13.23	□□□□□ -0.29
LRTOMT-222	ENST00000615940	SUPT6H	Q7KZ85	1726 aa	Known RBP	13.22	□□□□□ -0.29
LRTOMT-222	ENST00000615940	CD109	Q6YHK3	1445 aa		13.2	□□□□□ -0.3
LRTOMT-222	ENST00000615940	TMED8	Q6PL24	325 aa	Predicted RBP	13.2	□□□□□ -0.3
LRTOMT-222	ENST00000615940	CC2D2B	Q6DHV5	1058 aa		13.19	□□□□□ -0.3
LRTOMT-222	ENST00000615940	PREX2	Q70Z35	1606 aa		13.18	□□□□□ -0.3
LRTOMT-222	ENST00000615940	SECISBP2L	Q93073	1101 aa	Known RBP	13.18	□□□□□ -0.3
LRTOMT-222	ENST00000615940	PLCD4	Q9BRC7	762 aa		13.18	□□□□□ -0.3
LRTOMT-222	ENST00000615940	PRDM10	Q9NQV6	1147 aa		13.18	□□□□□ -0.3
LRTOMT-222	ENST00000615940	NCOA2	Q15596	1464 aa		13.17	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms