RNA–Protein interactions for RNA: ENST00000615287.4

CHRNA4-207, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5 BASIC

Gene CHRNA4, Length 5,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-207ENST00000615287 CHMP4BQ9H444 224 aaKnown RBP23.88■■□□□ 1.41
CHRNA4-207ENST00000615287 SMARCA4P51532 1647 aa23.87■■□□□ 1.41
CHRNA4-207ENST00000615287 FRAT1Q92837 279 aaPredicted RBP23.87■■□□□ 1.41
CHRNA4-207ENST00000615287 CYB5RLQ6IPT4 315 aa23.87■■□□□ 1.41
CHRNA4-207ENST00000615287 CCDC18Q5T9S5 1454 aa23.86■■□□□ 1.41
CHRNA4-207ENST00000615287 MPHOSPH9Q99550 1183 aa23.86■■□□□ 1.41
CHRNA4-207ENST00000615287 MS4A1P11836 297 aa23.83■■□□□ 1.41
CHRNA4-207ENST00000615287 OS9Q13438 667 aaPredicted RBP23.83■■□□□ 1.41
CHRNA4-207ENST00000615287 BECN1Q14457 450 aa23.82■■□□□ 1.4
CHRNA4-207ENST00000615287 RTF1Q92541 710 aaKnown RBP23.81■■□□□ 1.4
CHRNA4-207ENST00000615287 EIF5BO60841 1220 aaKnown RBP23.81■■□□□ 1.4
CHRNA4-207ENST00000615287 CSB-PGBD3P0DP91 1061 aa23.81■■□□□ 1.4
CHRNA4-207ENST00000615287 ROCK2O75116 1388 aaKnown RBP23.8■■□□□ 1.4
CHRNA4-207ENST00000615287 PTPRGP23470 1445 aa23.8■■□□□ 1.4
CHRNA4-207ENST00000615287 HSPA5P11021 654 aaKnown RBP23.78■■□□□ 1.4
CHRNA4-207ENST00000615287 CDK11BP21127 795 aaKnown RBP23.77■■□□□ 1.4
CHRNA4-207ENST00000615287 NCLP19338 710 aaKnown RBP23.76■■□□□ 1.39
CHRNA4-207ENST00000615287 GOLGA2Q08379 1002 aa23.75■■□□□ 1.39
CHRNA4-207ENST00000615287 EIF3AQ14152 1382 aaKnown RBP23.75■■□□□ 1.39
CHRNA4-207ENST00000615287 SUPT16HQ9Y5B9 1047 aaKnown RBP23.74■■□□□ 1.39
CHRNA4-207ENST00000615287 DDRGK1Q96HY6 314 aa23.73■■□□□ 1.39
CHRNA4-207ENST00000615287 RAB3GAP2Q9H2M9 1393 aa23.72■■□□□ 1.39
CHRNA4-207ENST00000615287 NUTM2DQ5VT03 806 aaPredicted RBP23.71■■□□□ 1.39
CHRNA4-207ENST00000615287 KTN1Q86UP2 1357 aaKnown RBP23.71■■□□□ 1.39
CHRNA4-207ENST00000615287 CCDC9Q9Y3X0 531 aaKnown RBP23.69■■□□□ 1.38
CHRNA4-207ENST00000615287 NBR1Q14596 966 aa23.67■■□□□ 1.38
CHRNA4-207ENST00000615287 TERF2IPQ9NYB0 399 aa23.66■■□□□ 1.38
CHRNA4-207ENST00000615287 NGDNQ8NEJ9 315 aaKnown RBP23.66■■□□□ 1.38
CHRNA4-207ENST00000615287 GOLGA6L22H0YM25 854 aa23.66■■□□□ 1.38
CHRNA4-207ENST00000615287 U2AF1L5P0DN76 240 aaPredicted RBP23.63■■□□□ 1.37
CHRNA4-207ENST00000615287 U2AF1Q01081 240 aaKnown RBP eCLIP23.63■■□□□ 1.37
CHRNA4-207ENST00000615287 GAPVD1Q14C86 1478 aa23.62■■□□□ 1.37
CHRNA4-207ENST00000615287 RGS3P49796 1198 aa23.61■■□□□ 1.37
CHRNA4-207ENST00000615287 CALD1Q05682 793 aaKnown RBP23.61■■□□□ 1.37
CHRNA4-207ENST00000615287 KCNJ4P48050 445 aa23.6■■□□□ 1.37
CHRNA4-207ENST00000615287 ZRSR1Q15695 479 aaKnown RBP23.6■■□□□ 1.37
CHRNA4-207ENST00000615287 FGD1P98174 961 aa23.59■■□□□ 1.37
CHRNA4-207ENST00000615287 ZNF330Q9Y3S2 320 aaPredicted RBP23.58■■□□□ 1.36
CHRNA4-207ENST00000615287 FGD5Q6ZNL6 1462 aa23.57■■□□□ 1.36
CHRNA4-207ENST00000615287 FAM69CQ0P6D2 419 aa23.55■■□□□ 1.36
CHRNA4-207ENST00000615287 RALBP1Q15311 655 aa23.55■■□□□ 1.36
CHRNA4-207ENST00000615287 L3MBTL2Q969R5 705 aa23.54■■□□□ 1.36
CHRNA4-207ENST00000615287 NUTM2FA1L443 756 aa23.53■■□□□ 1.36
CHRNA4-207ENST00000615287 PPP4R2Q9NY27 417 aa23.53■■□□□ 1.36
CHRNA4-207ENST00000615287 CHMP4AQ9BY43 222 aa23.52■■□□□ 1.36
CHRNA4-207ENST00000615287 TAOK2Q9UL54 1235 aa23.52■■□□□ 1.36
CHRNA4-207ENST00000615287 IPO8O15397 1037 aaKnown RBP23.52■■□□□ 1.36
CHRNA4-207ENST00000615287 TRAK1Q9UPV9 953 aa23.52■■□□□ 1.36
CHRNA4-207ENST00000615287 CCER2I3L3R5 266 aa23.52■■□□□ 1.36
CHRNA4-207ENST00000615287 RAD54L2Q9Y4B4 1467 aa23.51■■□□□ 1.35
CHRNA4-207ENST00000615287 AMPHP49418 695 aa23.51■■□□□ 1.35
CHRNA4-207ENST00000615287 CCDC144AA2RUR9 1427 aa23.5■■□□□ 1.35
CHRNA4-207ENST00000615287 ANP32EQ9BTT0 268 aa23.5■■□□□ 1.35
CHRNA4-207ENST00000615287 UACAQ9BZF9 1416 aa23.49■■□□□ 1.35
CHRNA4-207ENST00000615287 VGFO15240 615 aaPredicted RBP23.49■■□□□ 1.35
CHRNA4-207ENST00000615287 NAP1L2Q9ULW6 460 aaPredicted RBP23.49■■□□□ 1.35
CHRNA4-207ENST00000615287 NCAPD3P42695 1498 aa23.48■■□□□ 1.35
CHRNA4-207ENST00000615287 TULP1O00294 542 aaPredicted RBP23.47■■□□□ 1.35
CHRNA4-207ENST00000615287 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.46■■□□□ 1.35
CHRNA4-207ENST00000615287 TPRNQ4KMQ1 711 aa23.46■■□□□ 1.35
CHRNA4-207ENST00000615287 TMX4Q9H1E5 349 aaPredicted RBP23.46■■□□□ 1.35
CHRNA4-207ENST00000615287 RUSC2Q8N2Y8 1516 aa23.44■■□□□ 1.34
CHRNA4-207ENST00000615287 IGF1RP08069 1367 aa23.44■■□□□ 1.34
CHRNA4-207ENST00000615287 STK31Q9BXU1 1019 aa23.44■■□□□ 1.34
CHRNA4-207ENST00000615287 LTV1Q96GA3 475 aaPredicted RBP23.43■■□□□ 1.34
CHRNA4-207ENST00000615287 AQRO60306 1485 aaKnown RBP eCLIP23.43■■□□□ 1.34
CHRNA4-207ENST00000615287 AEBP2Q6ZN18 517 aaPredicted RBP23.42■■□□□ 1.34
CHRNA4-207ENST00000615287 HSP90AB1P08238 724 aaKnown RBP23.38■■□□□ 1.33
CHRNA4-207ENST00000615287 MCCP23508 829 aa23.38■■□□□ 1.33
CHRNA4-207ENST00000615287 APBB1O00213 710 aa23.37■■□□□ 1.33
CHRNA4-207ENST00000615287 ISY1Q9ULR0 285 aaKnown RBP23.37■■□□□ 1.33
CHRNA4-207ENST00000615287 LMOD3Q0VAK6 560 aa23.36■■□□□ 1.33
CHRNA4-207ENST00000615287 CFAP44Q96MT7 982 aa23.36■■□□□ 1.33
CHRNA4-207ENST00000615287 ITPRIPQ8IWB1 547 aa23.34■■□□□ 1.33
CHRNA4-207ENST00000615287 B4GALNT3Q6L9W6 998 aa23.33■■□□□ 1.33
CHRNA4-207ENST00000615287 EVC2Q86UK5 1308 aa23.33■■□□□ 1.33
CHRNA4-207ENST00000615287 HDAC5Q9UQL6 1122 aa23.32■■□□□ 1.32
CHRNA4-207ENST00000615287 TRIM44Q96DX7 344 aaPredicted RBP23.32■■□□□ 1.32
CHRNA4-207ENST00000615287 COG3Q96JB2 828 aa23.31■■□□□ 1.32
CHRNA4-207ENST00000615287 EVA1CP58658 441 aa23.31■■□□□ 1.32
CHRNA4-207ENST00000615287 TAF7LQ5H9L4 462 aa23.31■■□□□ 1.32
CHRNA4-207ENST00000615287 CHMP3Q9Y3E7 222 aa23.31■■□□□ 1.32
CHRNA4-207ENST00000615287 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.3■■□□□ 1.32
CHRNA4-207ENST00000615287 GRIN2BQ13224 1484 aa23.3■■□□□ 1.32
CHRNA4-207ENST00000615287 MYOM3Q5VTT5 1437 aa23.29■■□□□ 1.32
CHRNA4-207ENST00000615287 NLRP13Q86W25 1043 aa23.29■■□□□ 1.32
CHRNA4-207ENST00000615287 MINK1Q8N4C8 1332 aaPredicted RBP23.29■■□□□ 1.32
CHRNA4-207ENST00000615287 ST20-MTHFSA0A0A6YYL1 179 aa23.29■■□□□ 1.32
CHRNA4-207ENST00000615287 GORABQ5T7V8 394 aa23.28■■□□□ 1.32
CHRNA4-207ENST00000615287 PTMAP06454 111 aaKnown RBP23.28■■□□□ 1.32
CHRNA4-207ENST00000615287 KIAA1211Q6ZU35 1233 aa23.28■■□□□ 1.32
CHRNA4-207ENST00000615287 RCAN3Q9UKA8 241 aa23.27■■□□□ 1.32
CHRNA4-207ENST00000615287 SMC4Q9NTJ3 1288 aa23.27■■□□□ 1.32
CHRNA4-207ENST00000615287 CCDC146Q8IYE0 955 aa23.27■■□□□ 1.32
CHRNA4-207ENST00000615287 RWDD1Q9H446 243 aaPredicted RBP23.25■■□□□ 1.31
CHRNA4-207ENST00000615287 HSCBQ8IWL3 235 aa23.25■■□□□ 1.31
CHRNA4-207ENST00000615287 GTF2E1P29083 439 aaPredicted RBP23.24■■□□□ 1.31
CHRNA4-207ENST00000615287 CGNL1Q0VF96 1302 aa23.24■■□□□ 1.31
CHRNA4-207ENST00000615287 GOLGA6L4A6NEF3 574 aa23.23■■□□□ 1.31
CHRNA4-207ENST00000615287 PANK3Q9H999 370 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms