RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 CAMSAP2Q08AD1 1489 aa27.85■■■□□ 2.05
MMP28-204ENST00000615136 ABCC10Q5T3U5 1492 aa27.85■■■□□ 2.05
MMP28-204ENST00000615136 AKNAQ7Z591 1439 aa27.84■■■□□ 2.05
MMP28-204ENST00000615136 NEUROD1Q13562 356 aa27.83■■■□□ 2.05
MMP28-204ENST00000615136 CDC42BPAQ5VT25 1732 aa27.83■■■□□ 2.04
MMP28-204ENST00000615136 SCAF1Q9H7N4 1312 aaKnown RBP27.82■■■□□ 2.04
MMP28-204ENST00000615136 ZNF777Q9ULD5 760 aaPredicted RBP27.8■■■□□ 2.04
MMP28-204ENST00000615136 ACIN1Q9UKV3 1341 aaKnown RBP27.77■■■□□ 2.04
MMP28-204ENST00000615136 ABCC2Q92887 1545 aa27.76■■■□□ 2.03
MMP28-204ENST00000615136 ROCK1Q13464 1354 aa27.74■■■□□ 2.03
MMP28-204ENST00000615136 DENND4BO75064 1496 aaPredicted RBP27.73■■■□□ 2.03
MMP28-204ENST00000615136 CENPBP07199 599 aaPredicted RBP27.7■■■□□ 2.02
MMP28-204ENST00000615136 CROCC2H7BZ55 1655 aa27.68■■■□□ 2.02
MMP28-204ENST00000615136 TRIM52Q96A61 297 aa27.68■■■□□ 2.02
MMP28-204ENST00000615136 ADGBQ8N7X0 1667 aa27.63■■■□□ 2.01
MMP28-204ENST00000615136 CDC42BPBQ9Y5S2 1711 aa27.63■■■□□ 2.01
MMP28-204ENST00000615136 NCOA1Q15788 1441 aa27.63■■■□□ 2.01
MMP28-204ENST00000615136 TTC37Q6PGP7 1564 aa27.63■■■□□ 2.01
MMP28-204ENST00000615136 ZCCHC11Q5TAX3 1644 aaKnown RBP27.61■■■□□ 2.01
MMP28-204ENST00000615136 PREX2Q70Z35 1606 aa27.61■■■□□ 2.01
MMP28-204ENST00000615136 MIER1Q8N108 512 aa27.6■■■□□ 2.01
MMP28-204ENST00000615136 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.59■■■□□ 2.01
MMP28-204ENST00000615136 ADGRL2O95490 1459 aa27.59■■■□□ 2.01
MMP28-204ENST00000615136 MPHOSPH9Q99550 1183 aa27.59■■■□□ 2.01
MMP28-204ENST00000615136 TIMELESSQ9UNS1 1208 aa27.59■■■□□ 2.01
MMP28-204ENST00000615136 UHRF1BP1LA0JNW5 1464 aa27.59■■■□□ 2.01
MMP28-204ENST00000615136 SAMD9LQ8IVG5 1584 aa27.58■■■□□ 2.01
MMP28-204ENST00000615136 HNRNPMP52272 730 aaKnown RBP eCLIP27.57■■■□□ 2
MMP28-204ENST00000615136 PPP1R15AO75807 674 aaPredicted RBP27.56■■■□□ 2
MMP28-204ENST00000615136 KDM5BQ9UGL1 1544 aa27.56■■■□□ 2
MMP28-204ENST00000615136 FOXD1Q16676 465 aa27.55■■■□□ 2
MMP28-204ENST00000615136 KCNH8Q96L42 1107 aa27.54■■■□□ 2
MMP28-204ENST00000615136 MBD5Q9P267 1494 aa27.53■■■□□ 2
MMP28-204ENST00000615136 TONSLQ96HA7 1378 aa27.53■■■□□ 2
MMP28-204ENST00000615136 C9orf84Q5VXU9 1444 aa27.51■■■□□ 2
MMP28-204ENST00000615136 SHANK2Q9UPX8 1470 aa27.51■■□□□ 1.99
MMP28-204ENST00000615136 ANKRD30AQ9BXX3 1397 aa27.5■■□□□ 1.99
MMP28-204ENST00000615136 ARHGEF5Q12774 1597 aa27.49■■□□□ 1.99
MMP28-204ENST00000615136 ARHGAP5Q13017 1502 aa27.48■■□□□ 1.99
MMP28-204ENST00000615136 MYO5CQ9NQX4 1742 aa27.46■■□□□ 1.99
MMP28-204ENST00000615136 PZPP20742 1482 aa27.46■■□□□ 1.99
MMP28-204ENST00000615136 SYCP2Q9BX26 1530 aa27.44■■□□□ 1.98
MMP28-204ENST00000615136 ANKRD50Q9ULJ7 1429 aa27.44■■□□□ 1.98
MMP28-204ENST00000615136 TSPY4P0CV99 314 aa27.43■■□□□ 1.98
MMP28-204ENST00000615136 TSPY10P0CW01 314 aa27.43■■□□□ 1.98
MMP28-204ENST00000615136 OSCARQ8IYS5 282 aa27.43■■□□□ 1.98
MMP28-204ENST00000615136 SLC4A1APQ9BWU0 796 aaKnown RBP27.43■■□□□ 1.98
MMP28-204ENST00000615136 CCDC141Q6ZP82 1450 aa27.43■■□□□ 1.98
MMP28-204ENST00000615136 ANKRD30BQ9BXX2 1392 aa27.4■■□□□ 1.98
MMP28-204ENST00000615136 KIF15Q9NS87 1388 aa27.36■■□□□ 1.97
MMP28-204ENST00000615136 PLCH2O75038 1416 aa27.36■■□□□ 1.97
MMP28-204ENST00000615136 ARHGEF12Q9NZN5 1544 aa27.36■■□□□ 1.97
MMP28-204ENST00000615136 HIRIP3Q9BW71 556 aaPredicted RBP27.34■■□□□ 1.97
MMP28-204ENST00000615136 GTF3C3Q9Y5Q9 886 aa27.33■■□□□ 1.97
MMP28-204ENST00000615136 YTHDC1Q96MU7 727 aaKnown RBP27.33■■□□□ 1.96
MMP28-204ENST00000615136 RSPH4AQ5TD94 716 aa27.3■■□□□ 1.96
MMP28-204ENST00000615136 RPRD2Q5VT52 1461 aaKnown RBP27.3■■□□□ 1.96
MMP28-204ENST00000615136 KIAA1107Q9UPP5 1409 aa27.29■■□□□ 1.96
MMP28-204ENST00000615136 WDR7Q9Y4E6 1490 aa27.29■■□□□ 1.96
MMP28-204ENST00000615136 L3MBTL2Q969R5 705 aa27.28■■□□□ 1.96
MMP28-204ENST00000615136 MAST1Q9Y2H9 1570 aa27.28■■□□□ 1.96
MMP28-204ENST00000615136 NUP155O75694 1391 aa27.27■■□□□ 1.96
MMP28-204ENST00000615136 PKD2Q13563 968 aa27.26■■□□□ 1.95
MMP28-204ENST00000615136 PLEKHH2Q8IVE3 1493 aa27.26■■□□□ 1.95
MMP28-204ENST00000615136 EFCAB2Q5VUJ9 269 aa27.25■■□□□ 1.95
MMP28-204ENST00000615136 ABCC1P33527 1531 aa27.24■■□□□ 1.95
MMP28-204ENST00000615136 TEX14Q8IWB6 1497 aa27.23■■□□□ 1.95
MMP28-204ENST00000615136 KDM5DQ9BY66 1539 aa27.23■■□□□ 1.95
MMP28-204ENST00000615136 ASXL2Q76L83 1435 aa27.21■■□□□ 1.95
MMP28-204ENST00000615136 TRAPPC8Q9Y2L5 1435 aa27.21■■□□□ 1.95
MMP28-204ENST00000615136 PLXNC1O60486 1568 aa27.19■■□□□ 1.94
MMP28-204ENST00000615136 ABCA9Q8IUA7 1624 aa27.17■■□□□ 1.94
MMP28-204ENST00000615136 ARAP3Q8WWN8 1544 aa27.16■■□□□ 1.94
MMP28-204ENST00000615136 DDX10Q13206 875 aaKnown RBP27.14■■□□□ 1.93
MMP28-204ENST00000615136 NBPF8Q3BBV2 869 aa27.13■■□□□ 1.93
MMP28-204ENST00000615136 FAM135AQ9P2D6 1515 aa27.12■■□□□ 1.93
MMP28-204ENST00000615136 AFAP1Q8N556 730 aa27.11■■□□□ 1.93
MMP28-204ENST00000615136 FANCAO15360 1455 aa27.1■■□□□ 1.93
MMP28-204ENST00000615136 UNC13BO14795 1591 aa27.1■■□□□ 1.93
MMP28-204ENST00000615136 DUOX2Q9NRD8 1548 aa27.08■■□□□ 1.93
MMP28-204ENST00000615136 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.06■■□□□ 1.92
MMP28-204ENST00000615136 HSPA5P11021 654 aaKnown RBP27.05■■□□□ 1.92
MMP28-204ENST00000615136 NPM1P06748 294 aaKnown RBP eCLIP27.04■■□□□ 1.92
MMP28-204ENST00000615136 ZFYVE16Q7Z3T8 1539 aa27.04■■□□□ 1.92
MMP28-204ENST00000615136 SPAG9O60271 1321 aaKnown RBP27.03■■□□□ 1.92
MMP28-204ENST00000615136 ERBINQ96RT1 1412 aa27.01■■□□□ 1.91
MMP28-204ENST00000615136 ADGRL1O94910 1474 aa27■■□□□ 1.91
MMP28-204ENST00000615136 IQGAP3Q86VI3 1631 aa26.99■■□□□ 1.91
MMP28-204ENST00000615136 SCAPERQ9BY12 1400 aa26.98■■□□□ 1.91
MMP28-204ENST00000615136 MAGI2Q86UL8 1455 aa26.98■■□□□ 1.91
MMP28-204ENST00000615136 RTEL1-TNFRSF6BF6WH68 1400 aa26.97■■□□□ 1.91
MMP28-204ENST00000615136 PELP1Q8IZL8 1130 aaKnown RBP26.97■■□□□ 1.91
MMP28-204ENST00000615136 EIF4G2P78344 907 aaKnown RBP eCLIP26.96■■□□□ 1.91
MMP28-204ENST00000615136 INO80Q9ULG1 1556 aaPredicted RBP26.95■■□□□ 1.91
MMP28-204ENST00000615136 PLA2R1Q13018 1463 aa26.94■■□□□ 1.9
MMP28-204ENST00000615136 ATP7AQ04656 1500 aa26.93■■□□□ 1.9
MMP28-204ENST00000615136 ZNF326Q5BKZ1 582 aaKnown RBP26.91■■□□□ 1.9
MMP28-204ENST00000615136 WASHC2AQ641Q2 1341 aa26.91■■□□□ 1.9
MMP28-204ENST00000615136 CD109Q6YHK3 1445 aa26.89■■□□□ 1.9
MMP28-204ENST00000615136 C11orf95C9JLR9 678 aaPredicted RBP26.87■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms