RNA–Protein interactions for RNA: ENST00000614547.4

CDH5-208, Transcript of cadherin 5, humanhuman

TSL 1 (best) BASIC

Gene CDH5, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-208ENST00000614547 CANXP27824 592 aaKnown RBP15.56■□□□□ 0.08
CDH5-208ENST00000614547 CCDC7Q96M83 1385 aa15.55■□□□□ 0.08
CDH5-208ENST00000614547 NBPF8Q3BBV2 869 aa15.55■□□□□ 0.08
CDH5-208ENST00000614547 PEG3Q9GZU2 1588 aa15.55■□□□□ 0.08
CDH5-208ENST00000614547 FMN1Q68DA7 1419 aa15.55■□□□□ 0.08
CDH5-208ENST00000614547 HMGXB3Q12766 1538 aa15.53■□□□□ 0.08
CDH5-208ENST00000614547 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.53■□□□□ 0.08
CDH5-208ENST00000614547 POLA1P09884 1462 aaPredicted RBP15.52■□□□□ 0.08
CDH5-208ENST00000614547 CNTLNQ9NXG0 1405 aa15.52■□□□□ 0.07
CDH5-208ENST00000614547 DDRGK1Q96HY6 314 aa15.51■□□□□ 0.07
CDH5-208ENST00000614547 TCERG1O14776 1098 aaKnown RBP15.51■□□□□ 0.07
CDH5-208ENST00000614547 FGD6Q6ZV73 1430 aa15.49■□□□□ 0.07
CDH5-208ENST00000614547 RRP1P56182 461 aaKnown RBP15.49■□□□□ 0.07
CDH5-208ENST00000614547 ERICH3Q5RHP9 1530 aa15.49■□□□□ 0.07
CDH5-208ENST00000614547 UACAQ9BZF9 1416 aa15.49■□□□□ 0.07
CDH5-208ENST00000614547 TOP2BQ02880 1626 aa15.49■□□□□ 0.07
CDH5-208ENST00000614547 DCAF11Q8TEB1 546 aa15.49■□□□□ 0.07
CDH5-208ENST00000614547 TOPBP1Q92547 1522 aa15.48■□□□□ 0.07
CDH5-208ENST00000614547 SPRYD3Q8NCJ5 442 aa15.48■□□□□ 0.07
CDH5-208ENST00000614547 CDCA7LQ96GN5 454 aa15.48■□□□□ 0.07
CDH5-208ENST00000614547 PKD2Q13563 968 aa15.47■□□□□ 0.07
CDH5-208ENST00000614547 TIAM1Q13009 1591 aa15.47■□□□□ 0.07
CDH5-208ENST00000614547 CRBNQ96SW2 442 aa15.46■□□□□ 0.06
CDH5-208ENST00000614547 SLKQ9H2G2 1235 aaPredicted RBP15.45■□□□□ 0.06
CDH5-208ENST00000614547 WDR43Q15061 677 aaKnown RBP eCLIP15.45■□□□□ 0.06
CDH5-208ENST00000614547 GAPVD1Q14C86 1478 aa15.44■□□□□ 0.06
CDH5-208ENST00000614547 ST20-MTHFSA0A0A6YYL1 179 aa15.44■□□□□ 0.06
CDH5-208ENST00000614547 GSE1Q14687 1217 aa15.44■□□□□ 0.06
CDH5-208ENST00000614547 ZNF644Q9H582 1327 aaPredicted RBP15.43■□□□□ 0.06
CDH5-208ENST00000614547 ARID4BQ4LE39 1312 aaPredicted RBP15.43■□□□□ 0.06
CDH5-208ENST00000614547 CFDP1Q9UEE9 299 aaPredicted RBP15.42■□□□□ 0.06
CDH5-208ENST00000614547 URB2Q14146 1524 aaKnown RBP15.42■□□□□ 0.06
CDH5-208ENST00000614547 NFKBIBQ15653 356 aa15.41■□□□□ 0.06
CDH5-208ENST00000614547 JPH4Q96JJ6 628 aa15.41■□□□□ 0.06
CDH5-208ENST00000614547 FRAT1Q92837 279 aaPredicted RBP15.41■□□□□ 0.06
CDH5-208ENST00000614547 NEUROD2Q15784 382 aa15.4■□□□□ 0.06
CDH5-208ENST00000614547 ZNF608Q9ULD9 1512 aaPredicted RBP15.4■□□□□ 0.06
CDH5-208ENST00000614547 GZF1Q9H116 711 aaPredicted RBP15.39■□□□□ 0.05
CDH5-208ENST00000614547 PTPRKQ15262 1439 aa15.38■□□□□ 0.05
CDH5-208ENST00000614547 USP47Q96K76 1375 aa15.38■□□□□ 0.05
CDH5-208ENST00000614547 NAP1L5Q96NT1 182 aaPredicted RBP15.37■□□□□ 0.05
CDH5-208ENST00000614547 PNISRQ8TF01 805 aaKnown RBP15.37■□□□□ 0.05
CDH5-208ENST00000614547 NAIPQ13075 1403 aa15.36■□□□□ 0.05
CDH5-208ENST00000614547 BACH2Q9BYV9 841 aa15.36■□□□□ 0.05
CDH5-208ENST00000614547 PLPPR3Q6T4P5 718 aa15.35■□□□□ 0.05
CDH5-208ENST00000614547 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.35■□□□□ 0.05
CDH5-208ENST00000614547 FRAT2O75474 233 aaPredicted RBP15.35■□□□□ 0.05
CDH5-208ENST00000614547 USP35Q9P2H5 1018 aa15.35■□□□□ 0.05
CDH5-208ENST00000614547 PLEKHD1A6NEE1 506 aa15.34■□□□□ 0.05
CDH5-208ENST00000614547 TSPY4P0CV99 314 aa15.33■□□□□ 0.05
CDH5-208ENST00000614547 TSPY10P0CW01 314 aa15.33■□□□□ 0.05
CDH5-208ENST00000614547 HFM1A2PYH4 1435 aa15.33■□□□□ 0.05
CDH5-208ENST00000614547 SMG6Q86US8 1419 aaKnown RBP15.32■□□□□ 0.04
CDH5-208ENST00000614547 CCDC146Q8IYE0 955 aa15.32■□□□□ 0.04
CDH5-208ENST00000614547 UPF2Q9HAU5 1272 aaKnown RBP15.32■□□□□ 0.04
CDH5-208ENST00000614547 NCOA2Q15596 1464 aa15.32■□□□□ 0.04
CDH5-208ENST00000614547 MYOM3Q5VTT5 1437 aa15.32■□□□□ 0.04
CDH5-208ENST00000614547 MYBBP1AQ9BQG0 1328 aaKnown RBP15.3■□□□□ 0.04
CDH5-208ENST00000614547 TNNT2P45379 298 aaPredicted RBP15.3■□□□□ 0.04
CDH5-208ENST00000614547 NLRP13Q86W25 1043 aa15.3■□□□□ 0.04
CDH5-208ENST00000614547 PCF11O94913 1555 aaKnown RBP15.3■□□□□ 0.04
CDH5-208ENST00000614547 C20orf194Q5TEA3 1177 aa15.29■□□□□ 0.04
CDH5-208ENST00000614547 KTN1Q86UP2 1357 aaKnown RBP15.29■□□□□ 0.04
CDH5-208ENST00000614547 RALBP1Q15311 655 aa15.29■□□□□ 0.04
CDH5-208ENST00000614547 KNSTRNQ9Y448 316 aa15.28■□□□□ 0.04
CDH5-208ENST00000614547 CASKIN1Q8WXD9 1431 aa15.27■□□□□ 0.04
CDH5-208ENST00000614547 HNRNPMP52272 730 aaKnown RBP eCLIP15.27■□□□□ 0.03
CDH5-208ENST00000614547 BECN1Q14457 450 aa15.27■□□□□ 0.03
CDH5-208ENST00000614547 NUP155O75694 1391 aa15.26■□□□□ 0.03
CDH5-208ENST00000614547 MS4A1P11836 297 aa15.26■□□□□ 0.03
CDH5-208ENST00000614547 KIF15Q9NS87 1388 aa15.26■□□□□ 0.03
CDH5-208ENST00000614547 ROCK2O75116 1388 aaKnown RBP15.25■□□□□ 0.03
CDH5-208ENST00000614547 HSP90AA1P07900 732 aaKnown RBP15.25■□□□□ 0.03
CDH5-208ENST00000614547 PANK3Q9H999 370 aa15.25■□□□□ 0.03
CDH5-208ENST00000614547 NCOA1Q15788 1441 aa15.24■□□□□ 0.03
CDH5-208ENST00000614547 FAM161AQ3B820 660 aa15.24■□□□□ 0.03
CDH5-208ENST00000614547 GLIPR1L2Q4G1C9 344 aa15.22■□□□□ 0.03
CDH5-208ENST00000614547 CLUAP1Q96AJ1 413 aa15.22■□□□□ 0.03
CDH5-208ENST00000614547 DNMBPQ6XZF7 1577 aa15.21■□□□□ 0.03
CDH5-208ENST00000614547 FYCO1Q9BQS8 1478 aa15.2■□□□□ 0.02
CDH5-208ENST00000614547 PDE3BQ13370 1112 aa15.2■□□□□ 0.02
CDH5-208ENST00000614547 BCL2L13Q9BXK5 485 aa15.2■□□□□ 0.02
CDH5-208ENST00000614547 CHGAP10645 457 aaKnown RBP15.19■□□□□ 0.02
CDH5-208ENST00000614547 ADAMTS8Q9UP79 889 aa15.19■□□□□ 0.02
CDH5-208ENST00000614547 SNAPC4Q5SXM2 1469 aa15.18■□□□□ 0.02
CDH5-208ENST00000614547 MRC2Q9UBG0 1479 aa15.18■□□□□ 0.02
CDH5-208ENST00000614547 ABCA10Q8WWZ4 1543 aa15.18■□□□□ 0.02
CDH5-208ENST00000614547 GOLGA2Q08379 1002 aa15.18■□□□□ 0.02
CDH5-208ENST00000614547 NBPF1Q3BBV0 1214 aa15.17■□□□□ 0.02
CDH5-208ENST00000614547 CENPQQ7L2Z9 268 aaPredicted RBP15.17■□□□□ 0.02
CDH5-208ENST00000614547 POGKQ9P215 609 aa15.17■□□□□ 0.02
CDH5-208ENST00000614547 COG6Q9Y2V7 657 aa15.17■□□□□ 0.02
CDH5-208ENST00000614547 PTPN23Q9H3S7 1636 aa15.17■□□□□ 0.02
CDH5-208ENST00000614547 BIVM-ERCC5R4GMW8 1640 aa15.16■□□□□ 0.02
CDH5-208ENST00000614547 ARID3AQ99856 593 aa15.16■□□□□ 0.02
CDH5-208ENST00000614547 VSIG10Q8N0Z9 540 aa15.16■□□□□ 0.02
CDH5-208ENST00000614547 PNNQ9H307 717 aaKnown RBP15.16■□□□□ 0.02
CDH5-208ENST00000614547 TMF1P82094 1093 aa15.15■□□□□ 0.02
CDH5-208ENST00000614547 RRP7AQ9Y3A4 280 aaKnown RBP15.15■□□□□ 0.02
CDH5-208ENST00000614547 TRIM44Q96DX7 344 aaPredicted RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms