RNA–Protein interactions for RNA: ENST00000613104.1

ATF3-210, Transcript of activating transcription factor 3, humanhuman

TSL 1 (best) BASIC

Gene ATF3, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-210ENST00000613104 SLC4A1APQ9BWU0 796 aaKnown RBP14.49□□□□□ -0.09
ATF3-210ENST00000613104 NCOA2Q15596 1464 aa14.49□□□□□ -0.09
ATF3-210ENST00000613104 CD109Q6YHK3 1445 aa14.48□□□□□ -0.09
ATF3-210ENST00000613104 MYO5CQ9NQX4 1742 aa14.47□□□□□ -0.09
ATF3-210ENST00000613104 PPRC1Q5VV67 1664 aaKnown RBP14.47□□□□□ -0.09
ATF3-210ENST00000613104 CDC42BPAQ5VT25 1732 aa14.46□□□□□ -0.09
ATF3-210ENST00000613104 PLCH2O75038 1416 aa14.46□□□□□ -0.09
ATF3-210ENST00000613104 ARAP3Q8WWN8 1544 aa14.46□□□□□ -0.1
ATF3-210ENST00000613104 GPATCH8Q9UKJ3 1502 aaKnown RBP14.46□□□□□ -0.1
ATF3-210ENST00000613104 PREX2Q70Z35 1606 aa14.45□□□□□ -0.1
ATF3-210ENST00000613104 CDC42BPBQ9Y5S2 1711 aa14.45□□□□□ -0.1
ATF3-210ENST00000613104 TSPOAP1O95153 1857 aa14.44□□□□□ -0.1
ATF3-210ENST00000613104 ITSN2Q9NZM3 1697 aa14.44□□□□□ -0.1
ATF3-210ENST00000613104 CCNB3Q8WWL7 1395 aa14.44□□□□□ -0.1
ATF3-210ENST00000613104 PPARGC1BQ86YN6 1023 aaKnown RBP14.42□□□□□ -0.1
ATF3-210ENST00000613104 PHLDB1Q86UU1 1377 aa14.42□□□□□ -0.1
ATF3-210ENST00000613104 MAPK8IP2Q13387 824 aaPredicted RBP14.41□□□□□ -0.1
ATF3-210ENST00000613104 TEX14Q8IWB6 1497 aa14.41□□□□□ -0.1
ATF3-210ENST00000613104 MYOM3Q5VTT5 1437 aa14.41□□□□□ -0.1
ATF3-210ENST00000613104 CFAP74Q9C0B2 1584 aa14.39□□□□□ -0.11
ATF3-210ENST00000613104 NEO1Q92859 1461 aa14.39□□□□□ -0.11
ATF3-210ENST00000613104 ARHGAP5Q13017 1502 aa14.39□□□□□ -0.11
ATF3-210ENST00000613104 FANCAO15360 1455 aa14.38□□□□□ -0.11
ATF3-210ENST00000613104 MIA2Q96PC5 1412 aa14.38□□□□□ -0.11
ATF3-210ENST00000613104 EFCAB2Q5VUJ9 269 aa14.37□□□□□ -0.11
ATF3-210ENST00000613104 CFDP1Q9UEE9 299 aaPredicted RBP14.37□□□□□ -0.11
ATF3-210ENST00000613104 SAMD9LQ8IVG5 1584 aa14.35□□□□□ -0.11
ATF3-210ENST00000613104 AKNAQ7Z591 1439 aa14.35□□□□□ -0.11
ATF3-210ENST00000613104 FGD6Q6ZV73 1430 aa14.34□□□□□ -0.11
ATF3-210ENST00000613104 TCOF1Q13428 1488 aaKnown RBP14.33□□□□□ -0.12
ATF3-210ENST00000613104 ABCC1P33527 1531 aa14.33□□□□□ -0.12
ATF3-210ENST00000613104 PTPN23Q9H3S7 1636 aa14.33□□□□□ -0.12
ATF3-210ENST00000613104 CAMSAP2Q08AD1 1489 aa14.32□□□□□ -0.12
ATF3-210ENST00000613104 PLEKHH2Q8IVE3 1493 aa14.32□□□□□ -0.12
ATF3-210ENST00000613104 KIAA1107Q9UPP5 1409 aa14.32□□□□□ -0.12
ATF3-210ENST00000613104 ADGRL1O94910 1474 aa14.31□□□□□ -0.12
ATF3-210ENST00000613104 ZNF777Q9ULD5 760 aaPredicted RBP14.31□□□□□ -0.12
ATF3-210ENST00000613104 RRBP1Q9P2E9 1410 aaKnown RBP14.31□□□□□ -0.12
ATF3-210ENST00000613104 ZNF644Q9H582 1327 aaPredicted RBP14.3□□□□□ -0.12
ATF3-210ENST00000613104 ARHGEF12Q9NZN5 1544 aa14.3□□□□□ -0.12
ATF3-210ENST00000613104 SCAPERQ9BY12 1400 aa14.29□□□□□ -0.12
ATF3-210ENST00000613104 COL17A1Q9UMD9 1497 aaPredicted RBP14.29□□□□□ -0.12
ATF3-210ENST00000613104 SYCP2Q9BX26 1530 aa14.29□□□□□ -0.12
ATF3-210ENST00000613104 DENND4BO75064 1496 aaPredicted RBP14.28□□□□□ -0.12
ATF3-210ENST00000613104 RICTORQ6R327 1708 aa14.28□□□□□ -0.12
ATF3-210ENST00000613104 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.28□□□□□ -0.12
ATF3-210ENST00000613104 MBD5Q9P267 1494 aa14.28□□□□□ -0.12
ATF3-210ENST00000613104 ARHGEF5Q12774 1597 aa14.27□□□□□ -0.12
ATF3-210ENST00000613104 KDM6BO15054 1643 aa14.26□□□□□ -0.13
ATF3-210ENST00000613104 FRMPD1Q5SYB0 1578 aa14.26□□□□□ -0.13
ATF3-210ENST00000613104 POGZQ7Z3K3 1410 aa14.26□□□□□ -0.13
ATF3-210ENST00000613104 TRAPPC8Q9Y2L5 1435 aa14.26□□□□□ -0.13
ATF3-210ENST00000613104 HNRNPMP52272 730 aaKnown RBP eCLIP14.25□□□□□ -0.13
ATF3-210ENST00000613104 RSPH4AQ5TD94 716 aa14.25□□□□□ -0.13
ATF3-210ENST00000613104 KDM5CP41229 1560 aa14.25□□□□□ -0.13
ATF3-210ENST00000613104 ZNF518AQ6AHZ1 1483 aa14.24□□□□□ -0.13
ATF3-210ENST00000613104 DNMT1P26358 1616 aaKnown RBP14.23□□□□□ -0.13
ATF3-210ENST00000613104 CCDC141Q6ZP82 1450 aa14.23□□□□□ -0.13
ATF3-210ENST00000613104 ZMYM4Q5VZL5 1548 aa14.22□□□□□ -0.13
ATF3-210ENST00000613104 RAPGEF3O95398 923 aa14.22□□□□□ -0.13
ATF3-210ENST00000613104 FAM50AQ14320 339 aaKnown RBP14.22□□□□□ -0.13
ATF3-210ENST00000613104 CROCC2H7BZ55 1655 aa14.22□□□□□ -0.13
ATF3-210ENST00000613104 AFAP1Q8N556 730 aa14.21□□□□□ -0.13
ATF3-210ENST00000613104 ABCC5O15440 1437 aa14.21□□□□□ -0.13
ATF3-210ENST00000613104 DAPK1P53355 1430 aa14.21□□□□□ -0.13
ATF3-210ENST00000613104 MAST1Q9Y2H9 1570 aa14.2□□□□□ -0.14
ATF3-210ENST00000613104 MLH3Q9UHC1 1453 aa14.19□□□□□ -0.14
ATF3-210ENST00000613104 SHANK2Q9UPX8 1470 aa14.19□□□□□ -0.14
ATF3-210ENST00000613104 HECW2Q9P2P5 1572 aa14.19□□□□□ -0.14
ATF3-210ENST00000613104 RNF216Q9NWF9 866 aaPredicted RBP14.19□□□□□ -0.14
ATF3-210ENST00000613104 INO80Q9ULG1 1556 aaPredicted RBP14.18□□□□□ -0.14
ATF3-210ENST00000613104 RTEL1-TNFRSF6BF6WH68 1400 aa14.18□□□□□ -0.14
ATF3-210ENST00000613104 KIDINS220Q9ULH0 1771 aa14.18□□□□□ -0.14
ATF3-210ENST00000613104 MAGI2Q86UL8 1455 aa14.18□□□□□ -0.14
ATF3-210ENST00000613104 DMRT2Q9Y5R5 561 aa14.17□□□□□ -0.14
ATF3-210ENST00000613104 PTPRKQ15262 1439 aa14.16□□□□□ -0.14
ATF3-210ENST00000613104 ATP7AQ04656 1500 aa14.16□□□□□ -0.14
ATF3-210ENST00000613104 ZFYVE16Q7Z3T8 1539 aa14.16□□□□□ -0.14
ATF3-210ENST00000613104 TSPY4P0CV99 314 aa14.16□□□□□ -0.14
ATF3-210ENST00000613104 TSPY10P0CW01 314 aa14.16□□□□□ -0.14
ATF3-210ENST00000613104 SPAG9O60271 1321 aaKnown RBP14.15□□□□□ -0.14
ATF3-210ENST00000613104 C9orf84Q5VXU9 1444 aa14.15□□□□□ -0.14
ATF3-210ENST00000613104 ILDR1Q86SU0 546 aaPredicted RBP14.15□□□□□ -0.14
ATF3-210ENST00000613104 ADGRL2O95490 1459 aa14.14□□□□□ -0.15
ATF3-210ENST00000613104 ADGBQ8N7X0 1667 aa14.14□□□□□ -0.15
ATF3-210ENST00000613104 ABCA6Q8N139 1617 aa14.13□□□□□ -0.15
ATF3-210ENST00000613104 ARHGEF40Q8TER5 1519 aa14.13□□□□□ -0.15
ATF3-210ENST00000613104 YEATS2Q9ULM3 1422 aa14.13□□□□□ -0.15
ATF3-210ENST00000613104 PLXNC1O60486 1568 aa14.13□□□□□ -0.15
ATF3-210ENST00000613104 DIP2CQ9Y2E4 1556 aa14.13□□□□□ -0.15
ATF3-210ENST00000613104 ROCK1Q13464 1354 aa14.1□□□□□ -0.15
ATF3-210ENST00000613104 NCOA1Q15788 1441 aa14.1□□□□□ -0.15
ATF3-210ENST00000613104 ITGAEP38570 1179 aa14.1□□□□□ -0.15
ATF3-210ENST00000613104 ANKRD30AQ9BXX3 1397 aa14.09□□□□□ -0.15
ATF3-210ENST00000613104 REREQ9P2R6 1566 aa14.09□□□□□ -0.15
ATF3-210ENST00000613104 CHIC2Q9UKJ5 165 aa14.09□□□□□ -0.15
ATF3-210ENST00000613104 MYT1LQ9UL68 1186 aa14.09□□□□□ -0.15
ATF3-210ENST00000613104 ATP10AO60312 1499 aa14.09□□□□□ -0.15
ATF3-210ENST00000613104 TRIM26Q12899 539 aaPredicted RBP14.08□□□□□ -0.16
ATF3-210ENST00000613104 A2MP01023 1474 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms