RNA–Protein interactions for RNA: ENST00000612394.4

PCDH15-224, Transcript of protocadherin related 15, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PCDH15, Length 5,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-224ENST00000612394 NEUROD2Q15784 382 aa11.7□□□□□ -0.54
PCDH15-224ENST00000612394 RALBP1Q15311 655 aa11.69□□□□□ -0.54
PCDH15-224ENST00000612394 ROCK2O75116 1388 aaKnown RBP11.69□□□□□ -0.54
PCDH15-224ENST00000612394 NBR1Q14596 966 aa11.69□□□□□ -0.54
PCDH15-224ENST00000612394 RTF1Q92541 710 aaKnown RBP11.69□□□□□ -0.54
PCDH15-224ENST00000612394 TRIM44Q96DX7 344 aaPredicted RBP11.69□□□□□ -0.54
PCDH15-224ENST00000612394 NUP155O75694 1391 aa11.69□□□□□ -0.54
PCDH15-224ENST00000612394 GGT6Q6P531 493 aa11.68□□□□□ -0.54
PCDH15-224ENST00000612394 MLECQ14165 292 aa11.68□□□□□ -0.54
PCDH15-224ENST00000612394 FRAT1Q92837 279 aaPredicted RBP11.67□□□□□ -0.54
PCDH15-224ENST00000612394 IPO8O15397 1037 aaKnown RBP11.67□□□□□ -0.54
PCDH15-224ENST00000612394 SUPT16HQ9Y5B9 1047 aaKnown RBP11.67□□□□□ -0.54
PCDH15-224ENST00000612394 UACAQ9BZF9 1416 aa11.66□□□□□ -0.54
PCDH15-224ENST00000612394 MPHOSPH9Q99550 1183 aa11.66□□□□□ -0.54
PCDH15-224ENST00000612394 MCCP23508 829 aa11.66□□□□□ -0.54
PCDH15-224ENST00000612394 TNNT2P45379 298 aaPredicted RBP11.66□□□□□ -0.54
PCDH15-224ENST00000612394 GOLGA2Q08379 1002 aa11.66□□□□□ -0.54
PCDH15-224ENST00000612394 HSPA5P11021 654 aaKnown RBP11.65□□□□□ -0.54
PCDH15-224ENST00000612394 GOLGA6L6A8MZA4 724 aa11.65□□□□□ -0.54
PCDH15-224ENST00000612394 EID1Q9Y6B2 187 aa11.65□□□□□ -0.55
PCDH15-224ENST00000612394 FANCD2Q9BXW9 1451 aa11.65□□□□□ -0.55
PCDH15-224ENST00000612394 SPAG9O60271 1321 aaKnown RBP11.64□□□□□ -0.55
PCDH15-224ENST00000612394 RAB3GAP2Q9H2M9 1393 aa11.64□□□□□ -0.55
PCDH15-224ENST00000612394 ERICH6BQ5W0A0 696 aa11.64□□□□□ -0.55
PCDH15-224ENST00000612394 TERF2IPQ9NYB0 399 aa11.63□□□□□ -0.55
PCDH15-224ENST00000612394 HDAC5Q9UQL6 1122 aa11.62□□□□□ -0.55
PCDH15-224ENST00000612394 FGD1P98174 961 aa11.62□□□□□ -0.55
PCDH15-224ENST00000612394 KCNJ4P48050 445 aa11.61□□□□□ -0.55
PCDH15-224ENST00000612394 HSP90AB1P08238 724 aaKnown RBP11.61□□□□□ -0.55
PCDH15-224ENST00000612394 FHOD3Q2V2M9 1422 aa11.61□□□□□ -0.55
PCDH15-224ENST00000612394 KANK4Q5T7N3 995 aaPredicted RBP11.61□□□□□ -0.55
PCDH15-224ENST00000612394 PTMAP06454 111 aaKnown RBP11.6□□□□□ -0.55
PCDH15-224ENST00000612394 PHLDB1Q86UU1 1377 aa11.6□□□□□ -0.55
PCDH15-224ENST00000612394 KIF3BO15066 747 aa11.59□□□□□ -0.55
PCDH15-224ENST00000612394 JPH4Q96JJ6 628 aa11.59□□□□□ -0.55
PCDH15-224ENST00000612394 STK26Q9P289 416 aa11.59□□□□□ -0.55
PCDH15-224ENST00000612394 HSCBQ8IWL3 235 aa11.58□□□□□ -0.55
PCDH15-224ENST00000612394 LMOD3Q0VAK6 560 aa11.58□□□□□ -0.56
PCDH15-224ENST00000612394 NRDCO43847 1150 aa11.58□□□□□ -0.56
PCDH15-224ENST00000612394 WASHC2CQ9Y4E1 1318 aa11.58□□□□□ -0.56
PCDH15-224ENST00000612394 PTMSP20962 102 aa11.58□□□□□ -0.56
PCDH15-224ENST00000612394 RGS3P49796 1198 aa11.57□□□□□ -0.56
PCDH15-224ENST00000612394 SAFB2Q14151 953 aaKnown RBP eCLIP11.56□□□□□ -0.56
PCDH15-224ENST00000612394 PTPRGP23470 1445 aa11.56□□□□□ -0.56
PCDH15-224ENST00000612394 CSB-PGBD3P0DP91 1061 aa11.55□□□□□ -0.56
PCDH15-224ENST00000612394 HNRNPMP52272 730 aaKnown RBP eCLIP11.55□□□□□ -0.56
PCDH15-224ENST00000612394 RWDD1Q9H446 243 aaPredicted RBP11.55□□□□□ -0.56
PCDH15-224ENST00000612394 CCDC144AA2RUR9 1427 aa11.54□□□□□ -0.56
PCDH15-224ENST00000612394 CUX1P39880 1505 aa11.54□□□□□ -0.56
PCDH15-224ENST00000612394 PAK3O75914 559 aaPredicted RBP11.54□□□□□ -0.56
PCDH15-224ENST00000612394 U2AF1L5P0DN76 240 aaPredicted RBP11.54□□□□□ -0.56
PCDH15-224ENST00000612394 U2AF1Q01081 240 aaKnown RBP eCLIP11.54□□□□□ -0.56
PCDH15-224ENST00000612394 TMX4Q9H1E5 349 aaPredicted RBP11.53□□□□□ -0.56
PCDH15-224ENST00000612394 STK31Q9BXU1 1019 aa11.53□□□□□ -0.56
PCDH15-224ENST00000612394 GOLGA6L4A6NEF3 574 aa11.53□□□□□ -0.56
PCDH15-224ENST00000612394 PDE3BQ13370 1112 aa11.53□□□□□ -0.56
PCDH15-224ENST00000612394 PMFBP1Q8TBY8 1022 aa11.53□□□□□ -0.56
PCDH15-224ENST00000612394 NOP58Q9Y2X3 529 aaKnown RBP11.52□□□□□ -0.57
PCDH15-224ENST00000612394 SOX12O15370 315 aa11.52□□□□□ -0.57
PCDH15-224ENST00000612394 KIAA1211Q6ZU35 1233 aa11.52□□□□□ -0.57
PCDH15-224ENST00000612394 GPATCH3Q96I76 525 aa11.52□□□□□ -0.57
PCDH15-224ENST00000612394 GAPVD1Q14C86 1478 aa11.52□□□□□ -0.57
PCDH15-224ENST00000612394 KIF15Q9NS87 1388 aa11.51□□□□□ -0.57
PCDH15-224ENST00000612394 HMMRO75330 724 aa11.5□□□□□ -0.57
PCDH15-224ENST00000612394 FOXD1Q16676 465 aa11.5□□□□□ -0.57
PCDH15-224ENST00000612394 NAP1L2Q9ULW6 460 aaPredicted RBP11.5□□□□□ -0.57
PCDH15-224ENST00000612394 VGFO15240 615 aaPredicted RBP11.5□□□□□ -0.57
PCDH15-224ENST00000612394 STAC3Q96MF2 364 aa11.5□□□□□ -0.57
PCDH15-224ENST00000612394 HTATSF1O43719 755 aaKnown RBP11.49□□□□□ -0.57
PCDH15-224ENST00000612394 RCAN3Q9UKA8 241 aa11.49□□□□□ -0.57
PCDH15-224ENST00000612394 NLRP13Q86W25 1043 aa11.49□□□□□ -0.57
PCDH15-224ENST00000612394 NGDNQ8NEJ9 315 aaKnown RBP11.48□□□□□ -0.57
PCDH15-224ENST00000612394 FGD5Q6ZNL6 1462 aa11.48□□□□□ -0.57
PCDH15-224ENST00000612394 DNTTIP2Q5QJE6 756 aaKnown RBP11.48□□□□□ -0.57
PCDH15-224ENST00000612394 OSCARQ8IYS5 282 aa11.48□□□□□ -0.57
PCDH15-224ENST00000612394 NCAPD3P42695 1498 aa11.47□□□□□ -0.57
PCDH15-224ENST00000612394 MYOM3Q5VTT5 1437 aa11.47□□□□□ -0.57
PCDH15-224ENST00000612394 L1TD1Q5T7N2 865 aaKnown RBP11.47□□□□□ -0.57
PCDH15-224ENST00000612394 ITPRIPQ8IWB1 547 aa11.47□□□□□ -0.57
PCDH15-224ENST00000612394 L3MBTL2Q969R5 705 aa11.47□□□□□ -0.57
PCDH15-224ENST00000612394 EVC2Q86UK5 1308 aa11.46□□□□□ -0.57
PCDH15-224ENST00000612394 SENP3-EIF4A1A0A087X0R7 540 aa11.46□□□□□ -0.58
PCDH15-224ENST00000612394 TCERG1O14776 1098 aaKnown RBP11.46□□□□□ -0.58
PCDH15-224ENST00000612394 GNL2Q13823 731 aaKnown RBP11.45□□□□□ -0.58
PCDH15-224ENST00000612394 AMPHP49418 695 aa11.45□□□□□ -0.58
PCDH15-224ENST00000612394 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.45□□□□□ -0.58
PCDH15-224ENST00000612394 MYBBP1AQ9BQG0 1328 aaKnown RBP11.45□□□□□ -0.58
PCDH15-224ENST00000612394 B4GALNT3Q6L9W6 998 aa11.44□□□□□ -0.58
PCDH15-224ENST00000612394 GBP4Q96PP9 640 aa11.43□□□□□ -0.58
PCDH15-224ENST00000612394 CGNL1Q0VF96 1302 aa11.43□□□□□ -0.58
PCDH15-224ENST00000612394 NGEFQ8N5V2 710 aa11.43□□□□□ -0.58
PCDH15-224ENST00000612394 SMC4Q9NTJ3 1288 aa11.43□□□□□ -0.58
PCDH15-224ENST00000612394 CENPJQ9HC77 1338 aaPredicted RBP11.42□□□□□ -0.58
PCDH15-224ENST00000612394 CHAF1AQ13111 956 aaPredicted RBP11.42□□□□□ -0.58
PCDH15-224ENST00000612394 GORABQ5T7V8 394 aa11.42□□□□□ -0.58
PCDH15-224ENST00000612394 CCDC34Q96HJ3 373 aa11.42□□□□□ -0.58
PCDH15-224ENST00000612394 TAF7LQ5H9L4 462 aa11.41□□□□□ -0.58
PCDH15-224ENST00000612394 CHMP4CQ96CF2 233 aa11.41□□□□□ -0.58
PCDH15-224ENST00000612394 COG3Q96JB2 828 aa11.41□□□□□ -0.58
PCDH15-224ENST00000612394 CSPP1Q1MSJ5 1256 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms