RNA–Protein interactions for RNA: ENST00000612355.1

PPARGC1A-216, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 5 BASIC

Gene PPARGC1A, Length 936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-216ENST00000612355 C9orf84Q5VXU9 1444 aa16.83■□□□□ 0.28
PPARGC1A-216ENST00000612355 SOCS7O14512 581 aa16.82■□□□□ 0.28
PPARGC1A-216ENST00000612355 PLCH2O75038 1416 aa16.81■□□□□ 0.28
PPARGC1A-216ENST00000612355 DISP3Q9P2K9 1392 aa16.81■□□□□ 0.28
PPARGC1A-216ENST00000612355 ILDR2Q71H61 639 aa16.81■□□□□ 0.28
PPARGC1A-216ENST00000612355 SCAPERQ9BY12 1400 aa16.8■□□□□ 0.28
PPARGC1A-216ENST00000612355 MYO5CQ9NQX4 1742 aa16.8■□□□□ 0.28
PPARGC1A-216ENST00000612355 PLPPR3Q6T4P5 718 aa16.8■□□□□ 0.28
PPARGC1A-216ENST00000612355 CSRNP3Q8WYN3 585 aa16.8■□□□□ 0.28
PPARGC1A-216ENST00000612355 SPATA31D1Q6ZQQ2 1576 aa16.8■□□□□ 0.28
PPARGC1A-216ENST00000612355 CDK13Q14004 1512 aaKnown RBP16.79■□□□□ 0.28
PPARGC1A-216ENST00000612355 KDM5CP41229 1560 aa16.78■□□□□ 0.28
PPARGC1A-216ENST00000612355 MLECQ14165 292 aa16.78■□□□□ 0.28
PPARGC1A-216ENST00000612355 REREQ9P2R6 1566 aa16.77■□□□□ 0.28
PPARGC1A-216ENST00000612355 DMRT2Q9Y5R5 561 aa16.76■□□□□ 0.27
PPARGC1A-216ENST00000612355 EEA1Q15075 1411 aa16.76■□□□□ 0.27
PPARGC1A-216ENST00000612355 UHRF1BP1Q6BDS2 1440 aa16.76■□□□□ 0.27
PPARGC1A-216ENST00000612355 ZNF518AQ6AHZ1 1483 aa16.74■□□□□ 0.27
PPARGC1A-216ENST00000612355 PTPRTO14522 1441 aa16.74■□□□□ 0.27
PPARGC1A-216ENST00000612355 IQSEC2Q5JU85 1478 aa16.73■□□□□ 0.27
PPARGC1A-216ENST00000612355 DIP2CQ9Y2E4 1556 aa16.73■□□□□ 0.27
PPARGC1A-216ENST00000612355 C3P01024 1663 aa16.73■□□□□ 0.27
PPARGC1A-216ENST00000612355 LTBP4Q8N2S1 1624 aa16.72■□□□□ 0.27
PPARGC1A-216ENST00000612355 KIF14Q15058 1648 aa16.7■□□□□ 0.26
PPARGC1A-216ENST00000612355 CEBPAP49715 358 aaPredicted RBP16.7■□□□□ 0.26
PPARGC1A-216ENST00000612355 ABCA6Q8N139 1617 aa16.69■□□□□ 0.26
PPARGC1A-216ENST00000612355 EFCAB2Q5VUJ9 269 aa16.68■□□□□ 0.26
PPARGC1A-216ENST00000612355 AGLP35573 1532 aa16.68■□□□□ 0.26
PPARGC1A-216ENST00000612355 RANGAP1P46060 587 aaPredicted RBP16.67■□□□□ 0.26
PPARGC1A-216ENST00000612355 MLH3Q9UHC1 1453 aa16.66■□□□□ 0.26
PPARGC1A-216ENST00000612355 ARHGAP5Q13017 1502 aa16.65■□□□□ 0.26
PPARGC1A-216ENST00000612355 CDC42BPBQ9Y5S2 1711 aa16.65■□□□□ 0.26
PPARGC1A-216ENST00000612355 NCOA1Q15788 1441 aa16.64■□□□□ 0.25
PPARGC1A-216ENST00000612355 TROQ12816 1431 aaPredicted RBP16.63■□□□□ 0.25
PPARGC1A-216ENST00000612355 FMN1Q68DA7 1419 aa16.63■□□□□ 0.25
PPARGC1A-216ENST00000612355 TRAPPC8Q9Y2L5 1435 aa16.62■□□□□ 0.25
PPARGC1A-216ENST00000612355 LRRIQ1Q96JM4 1722 aa16.62■□□□□ 0.25
PPARGC1A-216ENST00000612355 ABCC1P33527 1531 aa16.61■□□□□ 0.25
PPARGC1A-216ENST00000612355 PREX2Q70Z35 1606 aa16.61■□□□□ 0.25
PPARGC1A-216ENST00000612355 AFAP1Q8N556 730 aa16.61■□□□□ 0.25
PPARGC1A-216ENST00000612355 MROH2AA6NES4 1674 aa16.61■□□□□ 0.25
PPARGC1A-216ENST00000612355 ITSN2Q9NZM3 1697 aa16.61■□□□□ 0.25
PPARGC1A-216ENST00000612355 CNTLNQ9NXG0 1405 aa16.6■□□□□ 0.25
PPARGC1A-216ENST00000612355 KIDINS220Q9ULH0 1771 aa16.59■□□□□ 0.25
PPARGC1A-216ENST00000612355 CDK11AQ9UQ88 783 aaPredicted RBP16.58■□□□□ 0.24
PPARGC1A-216ENST00000612355 CAMSAP1Q5T5Y3 1602 aa16.57■□□□□ 0.24
PPARGC1A-216ENST00000612355 ARHGAP35Q9NRY4 1499 aa16.57■□□□□ 0.24
PPARGC1A-216ENST00000612355 CLIP1P30622 1438 aa16.57■□□□□ 0.24
PPARGC1A-216ENST00000612355 NPATQ14207 1427 aa16.57■□□□□ 0.24
PPARGC1A-216ENST00000612355 ZNF142P52746 1687 aaPredicted RBP16.56■□□□□ 0.24
PPARGC1A-216ENST00000612355 CDC42BPAQ5VT25 1732 aa16.53■□□□□ 0.24
PPARGC1A-216ENST00000612355 PLA2R1Q13018 1463 aa16.51■□□□□ 0.23
PPARGC1A-216ENST00000612355 MYO3AQ8NEV4 1616 aa16.51■□□□□ 0.23
PPARGC1A-216ENST00000612355 ESF1Q9H501 851 aaKnown RBP16.5■□□□□ 0.23
PPARGC1A-216ENST00000612355 SUPT6HQ7KZ85 1726 aaKnown RBP16.49■□□□□ 0.23
PPARGC1A-216ENST00000612355 SAMD9LQ8IVG5 1584 aa16.49■□□□□ 0.23
PPARGC1A-216ENST00000612355 MYT1LQ9UL68 1186 aa16.49■□□□□ 0.23
PPARGC1A-216ENST00000612355 TCOF1Q13428 1488 aaKnown RBP16.48■□□□□ 0.23
PPARGC1A-216ENST00000612355 PLXNC1O60486 1568 aa16.47■□□□□ 0.23
PPARGC1A-216ENST00000612355 CEP170BQ9Y4F5 1589 aaPredicted RBP16.47■□□□□ 0.23
PPARGC1A-216ENST00000612355 ATP1B4Q9UN42 357 aaPredicted RBP16.47■□□□□ 0.23
PPARGC1A-216ENST00000612355 CCDC18Q5T9S5 1454 aa16.47■□□□□ 0.23
PPARGC1A-216ENST00000612355 CLTCQ00610 1675 aaKnown RBP16.46■□□□□ 0.23
PPARGC1A-216ENST00000612355 ZNF335Q9H4Z2 1342 aaPredicted RBP16.45■□□□□ 0.22
PPARGC1A-216ENST00000612355 ZMYM3Q14202 1370 aa16.45■□□□□ 0.22
PPARGC1A-216ENST00000612355 INO80Q9ULG1 1556 aaPredicted RBP16.44■□□□□ 0.22
PPARGC1A-216ENST00000612355 PKD2Q13563 968 aa16.43■□□□□ 0.22
PPARGC1A-216ENST00000612355 SYCP2Q9BX26 1530 aa16.43■□□□□ 0.22
PPARGC1A-216ENST00000612355 ATP7AQ04656 1500 aa16.42■□□□□ 0.22
PPARGC1A-216ENST00000612355 UBAP1LF5GYI3 381 aa16.42■□□□□ 0.22
PPARGC1A-216ENST00000612355 PTPRKQ15262 1439 aa16.42■□□□□ 0.22
PPARGC1A-216ENST00000612355 CASKIN1Q8WXD9 1431 aa16.42■□□□□ 0.22
PPARGC1A-216ENST00000612355 NCKAP5LQ9HCH0 1330 aa16.42■□□□□ 0.22
PPARGC1A-216ENST00000612355 MED1Q15648 1581 aaPredicted RBP16.41■□□□□ 0.22
PPARGC1A-216ENST00000612355 POLR1AO95602 1720 aaPredicted RBP16.39■□□□□ 0.21
PPARGC1A-216ENST00000612355 UBTFP17480 764 aaKnown RBP16.38■□□□□ 0.21
PPARGC1A-216ENST00000612355 DNMT1P26358 1616 aaKnown RBP16.37■□□□□ 0.21
PPARGC1A-216ENST00000612355 ADGBQ8N7X0 1667 aa16.37■□□□□ 0.21
PPARGC1A-216ENST00000612355 KIAA1107Q9UPP5 1409 aa16.36■□□□□ 0.21
PPARGC1A-216ENST00000612355 A2ML1A8K2U0 1454 aa16.36■□□□□ 0.21
PPARGC1A-216ENST00000612355 A2MP01023 1474 aa16.36■□□□□ 0.21
PPARGC1A-216ENST00000612355 GPATCH8Q9UKJ3 1502 aaKnown RBP16.36■□□□□ 0.21
PPARGC1A-216ENST00000612355 FYCO1Q9BQS8 1478 aa16.35■□□□□ 0.21
PPARGC1A-216ENST00000612355 CPS1P31327 1500 aa16.35■□□□□ 0.21
PPARGC1A-216ENST00000612355 NEURL4Q96JN8 1562 aa16.35■□□□□ 0.21
PPARGC1A-216ENST00000612355 SPAG9O60271 1321 aaKnown RBP16.35■□□□□ 0.21
PPARGC1A-216ENST00000612355 PLEKHH2Q8IVE3 1493 aa16.35■□□□□ 0.21
PPARGC1A-216ENST00000612355 PPP6R1Q9UPN7 881 aa16.33■□□□□ 0.2
PPARGC1A-216ENST00000612355 HSPA1LP34931 641 aa16.3■□□□□ 0.2
PPARGC1A-216ENST00000612355 ALKQ9UM73 1620 aa16.3■□□□□ 0.2
PPARGC1A-216ENST00000612355 FAM135AQ9P2D6 1515 aa16.29■□□□□ 0.2
PPARGC1A-216ENST00000612355 SHANK2Q9UPX8 1470 aa16.29■□□□□ 0.2
PPARGC1A-216ENST00000612355 VWDEQ8N2E2 1590 aa16.28■□□□□ 0.2
PPARGC1A-216ENST00000612355 HNRNPMP52272 730 aaKnown RBP eCLIP16.27■□□□□ 0.2
PPARGC1A-216ENST00000612355 EHMT2Q96KQ7 1210 aa16.27■□□□□ 0.2
PPARGC1A-216ENST00000612355 ZNF777Q9ULD5 760 aaPredicted RBP16.27■□□□□ 0.2
PPARGC1A-216ENST00000612355 TOM1O60784 492 aa16.25■□□□□ 0.19
PPARGC1A-216ENST00000612355 DEPDC5O75140 1603 aa16.25■□□□□ 0.19
PPARGC1A-216ENST00000612355 PZPP20742 1482 aa16.24■□□□□ 0.19
PPARGC1A-216ENST00000612355 GGT6Q6P531 493 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms