RNA–Protein interactions for RNA: ENST00000612223.4

SYNRG-217, Transcript of synergin gamma, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNRG, Length 8,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-217ENST00000612223 CEP162Q5TB80 1403 aa18.41■□□□□ 0.54
SYNRG-217ENST00000612223 AMER1Q5JTC6 1135 aaPredicted RBP18.41■□□□□ 0.54
SYNRG-217ENST00000612223 TAF7LQ5H9L4 462 aa18.41■□□□□ 0.54
SYNRG-217ENST00000612223 SUPT16HQ9Y5B9 1047 aaKnown RBP18.4■□□□□ 0.54
SYNRG-217ENST00000612223 NUTM2FA1L443 756 aa18.4■□□□□ 0.54
SYNRG-217ENST00000612223 GORABQ5T7V8 394 aa18.39■□□□□ 0.53
SYNRG-217ENST00000612223 MEX3CQ5U5Q3 659 aaKnown RBP18.38■□□□□ 0.53
SYNRG-217ENST00000612223 NGDNQ8NEJ9 315 aaKnown RBP18.38■□□□□ 0.53
SYNRG-217ENST00000612223 PRM3Q9NNZ6 103 aa18.37■□□□□ 0.53
SYNRG-217ENST00000612223 GTF2E1P29083 439 aaPredicted RBP18.37■□□□□ 0.53
SYNRG-217ENST00000612223 LTV1Q96GA3 475 aaPredicted RBP18.37■□□□□ 0.53
SYNRG-217ENST00000612223 MCCP23508 829 aa18.36■□□□□ 0.53
SYNRG-217ENST00000612223 PHF23Q9BUL5 403 aaPredicted RBP18.34■□□□□ 0.53
SYNRG-217ENST00000612223 EEA1Q15075 1411 aa18.32■□□□□ 0.52
SYNRG-217ENST00000612223 KIF3BO15066 747 aa18.32■□□□□ 0.52
SYNRG-217ENST00000612223 CARMIL2Q6F5E8 1435 aa18.32■□□□□ 0.52
SYNRG-217ENST00000612223 EFCAB2Q5VUJ9 269 aa18.32■□□□□ 0.52
SYNRG-217ENST00000612223 FRAT2O75474 233 aaPredicted RBP18.31■□□□□ 0.52
SYNRG-217ENST00000612223 EVA1CP58658 441 aa18.31■□□□□ 0.52
SYNRG-217ENST00000612223 DCAF1Q9Y4B6 1507 aa18.31■□□□□ 0.52
SYNRG-217ENST00000612223 CARMIL1Q5VZK9 1371 aa18.31■□□□□ 0.52
SYNRG-217ENST00000612223 CUX2O14529 1486 aa18.31■□□□□ 0.52
SYNRG-217ENST00000612223 PKD2Q13563 968 aa18.31■□□□□ 0.52
SYNRG-217ENST00000612223 U2AF1L5P0DN76 240 aaPredicted RBP18.31■□□□□ 0.52
SYNRG-217ENST00000612223 U2AF1Q01081 240 aaKnown RBP eCLIP18.31■□□□□ 0.52
SYNRG-217ENST00000612223 KIAA1211Q6ZU35 1233 aa18.3■□□□□ 0.52
SYNRG-217ENST00000612223 FOXD1Q16676 465 aa18.3■□□□□ 0.52
SYNRG-217ENST00000612223 KLHL34Q8N239 644 aa18.29■□□□□ 0.52
SYNRG-217ENST00000612223 SPRYD3Q8NCJ5 442 aa18.29■□□□□ 0.52
SYNRG-217ENST00000612223 NRDCO43847 1150 aa18.29■□□□□ 0.52
SYNRG-217ENST00000612223 AMPHP49418 695 aa18.28■□□□□ 0.52
SYNRG-217ENST00000612223 CEP164Q9UPV0 1460 aa18.27■□□□□ 0.52
SYNRG-217ENST00000612223 WASHC2CQ9Y4E1 1318 aa18.27■□□□□ 0.52
SYNRG-217ENST00000612223 SPAG9O60271 1321 aaKnown RBP18.26■□□□□ 0.51
SYNRG-217ENST00000612223 CYB5RLQ6IPT4 315 aa18.25■□□□□ 0.51
SYNRG-217ENST00000612223 HSCBQ8IWL3 235 aa18.25■□□□□ 0.51
SYNRG-217ENST00000612223 STK31Q9BXU1 1019 aa18.25■□□□□ 0.51
SYNRG-217ENST00000612223 VPS53Q5VIR6 699 aa18.24■□□□□ 0.51
SYNRG-217ENST00000612223 DRC7Q8IY82 874 aa18.24■□□□□ 0.51
SYNRG-217ENST00000612223 PDE4CQ08493 712 aa18.23■□□□□ 0.51
SYNRG-217ENST00000612223 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.23■□□□□ 0.51
SYNRG-217ENST00000612223 B4GALNT3Q6L9W6 998 aa18.23■□□□□ 0.51
SYNRG-217ENST00000612223 IPO8O15397 1037 aaKnown RBP18.22■□□□□ 0.51
SYNRG-217ENST00000612223 CALD1Q05682 793 aaKnown RBP18.22■□□□□ 0.51
SYNRG-217ENST00000612223 FHAD1B1AJZ9 1412 aa18.22■□□□□ 0.51
SYNRG-217ENST00000612223 ITPRIPQ8IWB1 547 aa18.21■□□□□ 0.51
SYNRG-217ENST00000612223 HNRNPMP52272 730 aaKnown RBP eCLIP18.21■□□□□ 0.51
SYNRG-217ENST00000612223 TOMM22Q9NS69 142 aa18.21■□□□□ 0.51
SYNRG-217ENST00000612223 SLC4A10Q6U841 1118 aa18.21■□□□□ 0.5
SYNRG-217ENST00000612223 KIAA2012Q0VF49 1180 aa18.2■□□□□ 0.5
SYNRG-217ENST00000612223 NACADO15069 1562 aa18.2■□□□□ 0.5
SYNRG-217ENST00000612223 CCDC180Q9P1Z9 1646 aa18.19■□□□□ 0.5
SYNRG-217ENST00000612223 ROCK2O75116 1388 aaKnown RBP18.19■□□□□ 0.5
SYNRG-217ENST00000612223 ERICH6BQ5W0A0 696 aa18.18■□□□□ 0.5
SYNRG-217ENST00000612223 HSP90B1P14625 803 aaKnown RBP18.18■□□□□ 0.5
SYNRG-217ENST00000612223 TERF2IPQ9NYB0 399 aa18.17■□□□□ 0.5
SYNRG-217ENST00000612223 PDS5BQ9NTI5 1447 aa18.17■□□□□ 0.5
SYNRG-217ENST00000612223 ANO8Q9HCE9 1232 aaPredicted RBP18.17■□□□□ 0.5
SYNRG-217ENST00000612223 TDRD9Q8NDG6 1382 aaKnown RBP18.16■□□□□ 0.5
SYNRG-217ENST00000612223 NUP155O75694 1391 aa18.16■□□□□ 0.5
SYNRG-217ENST00000612223 RASSF8Q8NHQ8 419 aa18.16■□□□□ 0.5
SYNRG-217ENST00000612223 GPATCH3Q96I76 525 aa18.16■□□□□ 0.5
SYNRG-217ENST00000612223 TNIKQ9UKE5 1360 aa18.15■□□□□ 0.5
SYNRG-217ENST00000612223 SYTL4Q96C24 671 aaPredicted RBP18.15■□□□□ 0.5
SYNRG-217ENST00000612223 MARCH6O60337 910 aa18.15■□□□□ 0.5
SYNRG-217ENST00000612223 KTN1Q86UP2 1357 aaKnown RBP18.15■□□□□ 0.5
SYNRG-217ENST00000612223 CECR2Q9BXF3 1484 aa18.15■□□□□ 0.5
SYNRG-217ENST00000612223 TRIM6-TRIM34B2RNG4 842 aa18.14■□□□□ 0.49
SYNRG-217ENST00000612223 CHAF1AQ13111 956 aaPredicted RBP18.14■□□□□ 0.49
SYNRG-217ENST00000612223 CHMP4AQ9BY43 222 aa18.14■□□□□ 0.49
SYNRG-217ENST00000612223 PPP4R2Q9NY27 417 aa18.14■□□□□ 0.49
SYNRG-217ENST00000612223 HSPA5P11021 654 aaKnown RBP18.13■□□□□ 0.49
SYNRG-217ENST00000612223 DCAF8L1A6NGE4 600 aa18.13■□□□□ 0.49
SYNRG-217ENST00000612223 RAD21O60216 631 aa18.13■□□□□ 0.49
SYNRG-217ENST00000612223 FBXW7Q969H0 707 aa18.12■□□□□ 0.49
SYNRG-217ENST00000612223 SOGA1O94964 1423 aa18.12■□□□□ 0.49
SYNRG-217ENST00000612223 KRI1Q8N9T8 703 aaKnown RBP18.12■□□□□ 0.49
SYNRG-217ENST00000612223 NGEFQ8N5V2 710 aa18.11■□□□□ 0.49
SYNRG-217ENST00000612223 CREBRFQ8IUR6 639 aa18.11■□□□□ 0.49
SYNRG-217ENST00000612223 NOC3LQ8WTT2 800 aaKnown RBP18.11■□□□□ 0.49
SYNRG-217ENST00000612223 CFAP44Q96MT7 982 aa18.11■□□□□ 0.49
SYNRG-217ENST00000612223 L1TD1Q5T7N2 865 aaKnown RBP18.1■□□□□ 0.49
SYNRG-217ENST00000612223 NAP1L5Q96NT1 182 aaPredicted RBP18.1■□□□□ 0.49
SYNRG-217ENST00000612223 TRAK1Q9UPV9 953 aa18.1■□□□□ 0.49
SYNRG-217ENST00000612223 C1orf141Q5JVX7 400 aa18.1■□□□□ 0.49
SYNRG-217ENST00000612223 EIF3AQ14152 1382 aaKnown RBP18.09■□□□□ 0.49
SYNRG-217ENST00000612223 CTDP1Q9Y5B0 961 aaPredicted RBP18.09■□□□□ 0.49
SYNRG-217ENST00000612223 TRIM34Q9BYJ4 488 aa18.09■□□□□ 0.49
SYNRG-217ENST00000612223 ARHGAP35Q9NRY4 1499 aa18.09■□□□□ 0.49
SYNRG-217ENST00000612223 ANKRD30AQ9BXX3 1397 aa18.07■□□□□ 0.48
SYNRG-217ENST00000612223 HDAC5Q9UQL6 1122 aa18.07■□□□□ 0.48
SYNRG-217ENST00000612223 SMC4Q9NTJ3 1288 aa18.07■□□□□ 0.48
SYNRG-217ENST00000612223 CCDC146Q8IYE0 955 aa18.06■□□□□ 0.48
SYNRG-217ENST00000612223 CWC22Q9HCG8 908 aaKnown RBP18.06■□□□□ 0.48
SYNRG-217ENST00000612223 NOL8Q76FK4 1167 aaKnown RBP18.04■□□□□ 0.48
SYNRG-217ENST00000612223 MPHOSPH9Q99550 1183 aa18.04■□□□□ 0.48
SYNRG-217ENST00000612223 WWC1Q8IX03 1113 aa18.04■□□□□ 0.48
SYNRG-217ENST00000612223 HMMRO75330 724 aa18.02■□□□□ 0.48
SYNRG-217ENST00000612223 RWDD1Q9H446 243 aaPredicted RBP18.02■□□□□ 0.48
SYNRG-217ENST00000612223 HTATSF1O43719 755 aaKnown RBP18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms