RNA–Protein interactions for RNA: ENST00000611899.4

PDE1B-209, Transcript of phosphodiesterase 1B, humanhuman

TSL 4

Gene PDE1B, Length 628 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1B-209ENST00000611899 PLPPR3Q6T4P5 718 aa34.8■■■■□ 3.16
PDE1B-209ENST00000611899 CDK11AQ9UQ88 783 aaPredicted RBP34.78■■■■□ 3.16
PDE1B-209ENST00000611899 HECW1Q76N89 1606 aa34.77■■■■□ 3.16
PDE1B-209ENST00000611899 ARHGAP35Q9NRY4 1499 aa34.76■■■■□ 3.15
PDE1B-209ENST00000611899 MLECQ14165 292 aa34.75■■■■□ 3.15
PDE1B-209ENST00000611899 EFCAB2Q5VUJ9 269 aa34.74■■■■□ 3.15
PDE1B-209ENST00000611899 HSPA2P54652 639 aa34.69■■■■□ 3.14
PDE1B-209ENST00000611899 SIGLEC1Q9BZZ2 1709 aa34.68■■■■□ 3.14
PDE1B-209ENST00000611899 ATP10AO60312 1499 aa34.65■■■■□ 3.14
PDE1B-209ENST00000611899 CHIC1Q5VXU3 224 aa34.64■■■■□ 3.14
PDE1B-209ENST00000611899 TROQ12816 1431 aaPredicted RBP34.64■■■■□ 3.14
PDE1B-209ENST00000611899 C9orf84Q5VXU9 1444 aa34.63■■■■□ 3.13
PDE1B-209ENST00000611899 MYO5CQ9NQX4 1742 aa34.62■■■■□ 3.13
PDE1B-209ENST00000611899 CLIP1P30622 1438 aa34.62■■■■□ 3.13
PDE1B-209ENST00000611899 KIF14Q15058 1648 aa34.62■■■■□ 3.13
PDE1B-209ENST00000611899 ARHGAP5Q13017 1502 aa34.58■■■■□ 3.13
PDE1B-209ENST00000611899 ZNF518AQ6AHZ1 1483 aa34.58■■■■□ 3.13
PDE1B-209ENST00000611899 FER1L4A9Z1Z3 1794 aa34.55■■■■□ 3.12
PDE1B-209ENST00000611899 ARHGEF12Q9NZN5 1544 aa34.55■■■■□ 3.12
PDE1B-209ENST00000611899 AFAP1Q8N556 730 aa34.54■■■■□ 3.12
PDE1B-209ENST00000611899 MYT1LQ9UL68 1186 aa34.53■■■■□ 3.12
PDE1B-209ENST00000611899 KDM5CP41229 1560 aa34.46■■■■□ 3.11
PDE1B-209ENST00000611899 CEBPAP49715 358 aaPredicted RBP34.45■■■■□ 3.11
PDE1B-209ENST00000611899 CASKIN1Q8WXD9 1431 aa34.41■■■■□ 3.1
PDE1B-209ENST00000611899 LRRIQ1Q96JM4 1722 aa34.41■■■■□ 3.1
PDE1B-209ENST00000611899 CCDC18Q5T9S5 1454 aa34.4■■■■□ 3.1
PDE1B-209ENST00000611899 DIP2CQ9Y2E4 1556 aa34.37■■■■□ 3.09
PDE1B-209ENST00000611899 MLH3Q9UHC1 1453 aa34.36■■■■□ 3.09
PDE1B-209ENST00000611899 CERKQ8TCT0 537 aa34.36■■■■□ 3.09
PDE1B-209ENST00000611899 TRAPPC8Q9Y2L5 1435 aa34.34■■■■□ 3.09
PDE1B-209ENST00000611899 CDC42BPBQ9Y5S2 1711 aa34.33■■■■□ 3.09
PDE1B-209ENST00000611899 PREX1Q8TCU6 1659 aa34.33■■■■□ 3.09
PDE1B-209ENST00000611899 REREQ9P2R6 1566 aa34.32■■■■□ 3.09
PDE1B-209ENST00000611899 PREX2Q70Z35 1606 aa34.32■■■■□ 3.08
PDE1B-209ENST00000611899 ABCC1P33527 1531 aa34.31■■■■□ 3.08
PDE1B-209ENST00000611899 UHRF1BP1Q6BDS2 1440 aa34.3■■■■□ 3.08
PDE1B-209ENST00000611899 ABCA6Q8N139 1617 aa34.3■■■■□ 3.08
PDE1B-209ENST00000611899 ESF1Q9H501 851 aaKnown RBP34.29■■■■□ 3.08
PDE1B-209ENST00000611899 DMRT2Q9Y5R5 561 aa34.25■■■■□ 3.07
PDE1B-209ENST00000611899 FYCO1Q9BQS8 1478 aa34.25■■■■□ 3.07
PDE1B-209ENST00000611899 AGLP35573 1532 aa34.25■■■■□ 3.07
PDE1B-209ENST00000611899 ZNF777Q9ULD5 760 aaPredicted RBP34.22■■■■□ 3.07
PDE1B-209ENST00000611899 ITSN2Q9NZM3 1697 aa34.22■■■■□ 3.07
PDE1B-209ENST00000611899 CDC42BPAQ5VT25 1732 aa34.15■■■■□ 3.06
PDE1B-209ENST00000611899 KIDINS220Q9ULH0 1771 aa34.13■■■■□ 3.05
PDE1B-209ENST00000611899 CNTLNQ9NXG0 1405 aa34.13■■■■□ 3.05
PDE1B-209ENST00000611899 C3P01024 1663 aa34.12■■■■□ 3.05
PDE1B-209ENST00000611899 GPATCH8Q9UKJ3 1502 aaKnown RBP34.11■■■■□ 3.05
PDE1B-209ENST00000611899 STRCQ7RTU9 1775 aa34.11■■■■□ 3.05
PDE1B-209ENST00000611899 SAMD9LQ8IVG5 1584 aa34.11■■■■□ 3.05
PDE1B-209ENST00000611899 SPAG9O60271 1321 aaKnown RBP34.1■■■■□ 3.05
PDE1B-209ENST00000611899 HNRNPMP52272 730 aaKnown RBP eCLIP34.09■■■■□ 3.05
PDE1B-209ENST00000611899 SYCP2Q9BX26 1530 aa34.09■■■■□ 3.05
PDE1B-209ENST00000611899 SETD1BQ9UPS6 1966 aaKnown RBP34.09■■■■□ 3.05
PDE1B-209ENST00000611899 CFDP1Q9UEE9 299 aaPredicted RBP34.05■■■■□ 3.04
PDE1B-209ENST00000611899 PTPRTO14522 1441 aa34.04■■■■□ 3.04
PDE1B-209ENST00000611899 CCNB3Q8WWL7 1395 aa34.03■■■■□ 3.04
PDE1B-209ENST00000611899 KIAA1107Q9UPP5 1409 aa34.01■■■■□ 3.03
PDE1B-209ENST00000611899 PLEKHH2Q8IVE3 1493 aa34.01■■■■□ 3.03
PDE1B-209ENST00000611899 MTUS2Q5JR59 1369 aa33.99■■■■□ 3.03
PDE1B-209ENST00000611899 ZMYM3Q14202 1370 aa33.98■■■■□ 3.03
PDE1B-209ENST00000611899 NPATQ14207 1427 aa33.97■■■■□ 3.03
PDE1B-209ENST00000611899 ATP7AQ04656 1500 aa33.97■■■■□ 3.03
PDE1B-209ENST00000611899 NCOA1Q15788 1441 aa33.95■■■■□ 3.02
PDE1B-209ENST00000611899 A2MP01023 1474 aa33.93■■■■□ 3.02
PDE1B-209ENST00000611899 MROH2AA6NES4 1674 aa33.91■■■■□ 3.02
PDE1B-209ENST00000611899 SUPT6HQ7KZ85 1726 aaKnown RBP33.9■■■■□ 3.02
PDE1B-209ENST00000611899 INO80Q9ULG1 1556 aaPredicted RBP33.89■■■■□ 3.02
PDE1B-209ENST00000611899 GGT6Q6P531 493 aa33.88■■■■□ 3.01
PDE1B-209ENST00000611899 PLXNC1O60486 1568 aa33.87■■■■□ 3.01
PDE1B-209ENST00000611899 CAMSAP1Q5T5Y3 1602 aa33.86■■■■□ 3.01
PDE1B-209ENST00000611899 ZNF644Q9H582 1327 aaPredicted RBP33.84■■■■□ 3.01
PDE1B-209ENST00000611899 LTBP4Q8N2S1 1624 aa33.82■■■■□ 3.01
PDE1B-209ENST00000611899 CLTCQ00610 1675 aaKnown RBP33.8■■■■□ 3
PDE1B-209ENST00000611899 EHBP1L1Q8N3D4 1523 aa33.79■■■■□ 3
PDE1B-209ENST00000611899 TIAM1Q13009 1591 aa33.79■■■■□ 3
PDE1B-209ENST00000611899 NCKAP5LQ9HCH0 1330 aa33.79■■■■□ 3
PDE1B-209ENST00000611899 DISP3Q9P2K9 1392 aa33.78■■■■□ 3
PDE1B-209ENST00000611899 PPP6R1Q9UPN7 881 aa33.78■■■■□ 3
PDE1B-209ENST00000611899 PTPRKQ15262 1439 aa33.78■■■■□ 3
PDE1B-209ENST00000611899 MBD5Q9P267 1494 aa33.76■■■□□ 2.99
PDE1B-209ENST00000611899 CEP162Q5TB80 1403 aa33.75■■■□□ 2.99
PDE1B-209ENST00000611899 IQSEC2Q5JU85 1478 aa33.75■■■□□ 2.99
PDE1B-209ENST00000611899 MYO3AQ8NEV4 1616 aa33.72■■■□□ 2.99
PDE1B-209ENST00000611899 ADGBQ8N7X0 1667 aa33.72■■■□□ 2.99
PDE1B-209ENST00000611899 PKD2Q13563 968 aa33.72■■■□□ 2.99
PDE1B-209ENST00000611899 RTEL1-TNFRSF6BF6WH68 1400 aa33.71■■■□□ 2.99
PDE1B-209ENST00000611899 PLA2R1Q13018 1463 aa33.71■■■□□ 2.99
PDE1B-209ENST00000611899 CEP170BQ9Y4F5 1589 aaPredicted RBP33.7■■■□□ 2.99
PDE1B-209ENST00000611899 ZNF335Q9H4Z2 1342 aaPredicted RBP33.69■■■□□ 2.98
PDE1B-209ENST00000611899 ZNF142P52746 1687 aaPredicted RBP33.68■■■□□ 2.98
PDE1B-209ENST00000611899 DHX29Q7Z478 1369 aaKnown RBP33.68■■■□□ 2.98
PDE1B-209ENST00000611899 TCOF1Q13428 1488 aaKnown RBP33.64■■■□□ 2.98
PDE1B-209ENST00000611899 CCDC141Q6ZP82 1450 aa33.62■■■□□ 2.97
PDE1B-209ENST00000611899 KIF3BO15066 747 aa33.61■■■□□ 2.97
PDE1B-209ENST00000611899 ILDR2Q71H61 639 aa33.61■■■□□ 2.97
PDE1B-209ENST00000611899 NCOA2Q15596 1464 aa33.6■■■□□ 2.97
PDE1B-209ENST00000611899 A2ML1A8K2U0 1454 aa33.59■■■□□ 2.97
PDE1B-209ENST00000611899 CAMSAP2Q08AD1 1489 aa33.58■■■□□ 2.97
PDE1B-209ENST00000611899 RSPH4AQ5TD94 716 aa33.58■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms