RNA–Protein interactions for RNA: ENST00000610583.1

PCDHGA6-202, Transcript of protocadherin gamma subfamily A, 6, humanhuman

APPRIS P1 BASIC

Gene PCDHGA6, Length 5,650 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6-202ENST00000610583 RAB3GAP2Q9H2M9 1393 aa18.26■□□□□ 0.51
PCDHGA6-202ENST00000610583 FHOD3Q2V2M9 1422 aa18.23■□□□□ 0.51
PCDHGA6-202ENST00000610583 HDGFL2Q7Z4V5 671 aaPredicted RBP18.23■□□□□ 0.51
PCDHGA6-202ENST00000610583 RGS3P49796 1198 aa18.23■□□□□ 0.51
PCDHGA6-202ENST00000610583 CCER2I3L3R5 266 aa18.22■□□□□ 0.51
PCDHGA6-202ENST00000610583 ROCK2O75116 1388 aaKnown RBP18.21■□□□□ 0.51
PCDHGA6-202ENST00000610583 ANP32EQ9BTT0 268 aa18.21■□□□□ 0.51
PCDHGA6-202ENST00000610583 KIF3BO15066 747 aa18.21■□□□□ 0.51
PCDHGA6-202ENST00000610583 HNRNPMP52272 730 aaKnown RBP eCLIP18.21■□□□□ 0.51
PCDHGA6-202ENST00000610583 JPH4Q96JJ6 628 aa18.21■□□□□ 0.5
PCDHGA6-202ENST00000610583 KTN1Q86UP2 1357 aaKnown RBP18.2■□□□□ 0.5
PCDHGA6-202ENST00000610583 OS9Q13438 667 aaPredicted RBP18.2■□□□□ 0.5
PCDHGA6-202ENST00000610583 RSPH4AQ5TD94 716 aa18.2■□□□□ 0.5
PCDHGA6-202ENST00000610583 NPHP1O15259 732 aa18.19■□□□□ 0.5
PCDHGA6-202ENST00000610583 CCDC18Q5T9S5 1454 aa18.18■□□□□ 0.5
PCDHGA6-202ENST00000610583 SPAG9O60271 1321 aaKnown RBP18.16■□□□□ 0.5
PCDHGA6-202ENST00000610583 SMARCA4P51532 1647 aa18.16■□□□□ 0.5
PCDHGA6-202ENST00000610583 CDK11BP21127 795 aaKnown RBP18.16■□□□□ 0.5
PCDHGA6-202ENST00000610583 RTF1Q92541 710 aaKnown RBP18.15■□□□□ 0.5
PCDHGA6-202ENST00000610583 FANCD2Q9BXW9 1451 aa18.12■□□□□ 0.49
PCDHGA6-202ENST00000610583 EIF3AQ14152 1382 aaKnown RBP18.12■□□□□ 0.49
PCDHGA6-202ENST00000610583 ZRSR1Q15695 479 aaKnown RBP18.11■□□□□ 0.49
PCDHGA6-202ENST00000610583 B4GALNT3Q6L9W6 998 aa18.11■□□□□ 0.49
PCDHGA6-202ENST00000610583 RALBP1Q15311 655 aa18.11■□□□□ 0.49
PCDHGA6-202ENST00000610583 PAK3O75914 559 aaPredicted RBP18.11■□□□□ 0.49
PCDHGA6-202ENST00000610583 WASHC2CQ9Y4E1 1318 aa18.1■□□□□ 0.49
PCDHGA6-202ENST00000610583 L3MBTL2Q969R5 705 aa18.09■□□□□ 0.49
PCDHGA6-202ENST00000610583 TRIM44Q96DX7 344 aaPredicted RBP18.09■□□□□ 0.49
PCDHGA6-202ENST00000610583 U2AF1L5P0DN76 240 aaPredicted RBP18.09■□□□□ 0.49
PCDHGA6-202ENST00000610583 U2AF1Q01081 240 aaKnown RBP eCLIP18.09■□□□□ 0.49
PCDHGA6-202ENST00000610583 KCNJ4P48050 445 aa18.07■□□□□ 0.48
PCDHGA6-202ENST00000610583 FGD1P98174 961 aa18.06■□□□□ 0.48
PCDHGA6-202ENST00000610583 CALD1Q05682 793 aaKnown RBP18.05■□□□□ 0.48
PCDHGA6-202ENST00000610583 GOLGA2Q08379 1002 aa18.05■□□□□ 0.48
PCDHGA6-202ENST00000610583 EID1Q9Y6B2 187 aa18.05■□□□□ 0.48
PCDHGA6-202ENST00000610583 IPO8O15397 1037 aaKnown RBP18.04■□□□□ 0.48
PCDHGA6-202ENST00000610583 TPRNQ4KMQ1 711 aa18.04■□□□□ 0.48
PCDHGA6-202ENST00000610583 TERF2IPQ9NYB0 399 aa18.04■□□□□ 0.48
PCDHGA6-202ENST00000610583 HSP90AB1P08238 724 aaKnown RBP18.03■□□□□ 0.48
PCDHGA6-202ENST00000610583 CSB-PGBD3P0DP91 1061 aa18.02■□□□□ 0.48
PCDHGA6-202ENST00000610583 PTPRGP23470 1445 aa18.02■□□□□ 0.48
PCDHGA6-202ENST00000610583 NUTM2DQ5VT03 806 aaPredicted RBP18.02■□□□□ 0.47
PCDHGA6-202ENST00000610583 RUSC2Q8N2Y8 1516 aa18■□□□□ 0.47
PCDHGA6-202ENST00000610583 PTMAP06454 111 aaKnown RBP17.99■□□□□ 0.47
PCDHGA6-202ENST00000610583 TAOK2Q9UL54 1235 aa17.98■□□□□ 0.47
PCDHGA6-202ENST00000610583 RCAN3Q9UKA8 241 aa17.98■□□□□ 0.47
PCDHGA6-202ENST00000610583 NAP1L2Q9ULW6 460 aaPredicted RBP17.97■□□□□ 0.47
PCDHGA6-202ENST00000610583 CFAP44Q96MT7 982 aa17.96■□□□□ 0.46
PCDHGA6-202ENST00000610583 MCCP23508 829 aa17.95■□□□□ 0.46
PCDHGA6-202ENST00000610583 NGDNQ8NEJ9 315 aaKnown RBP17.95■□□□□ 0.46
PCDHGA6-202ENST00000610583 NOP58Q9Y2X3 529 aaKnown RBP17.95■□□□□ 0.46
PCDHGA6-202ENST00000610583 CCDC144AA2RUR9 1427 aa17.95■□□□□ 0.46
PCDHGA6-202ENST00000610583 HSCBQ8IWL3 235 aa17.94■□□□□ 0.46
PCDHGA6-202ENST00000610583 CHMP4AQ9BY43 222 aa17.94■□□□□ 0.46
PCDHGA6-202ENST00000610583 GLIPR1L2Q4G1C9 344 aa17.94■□□□□ 0.46
PCDHGA6-202ENST00000610583 TRAK1Q9UPV9 953 aa17.93■□□□□ 0.46
PCDHGA6-202ENST00000610583 NLRP13Q86W25 1043 aa17.93■□□□□ 0.46
PCDHGA6-202ENST00000610583 ITPRIPQ8IWB1 547 aa17.92■□□□□ 0.46
PCDHGA6-202ENST00000610583 GAPVD1Q14C86 1478 aa17.92■□□□□ 0.46
PCDHGA6-202ENST00000610583 APBB1O00213 710 aa17.92■□□□□ 0.46
PCDHGA6-202ENST00000610583 FGD5Q6ZNL6 1462 aa17.91■□□□□ 0.46
PCDHGA6-202ENST00000610583 OSCARQ8IYS5 282 aa17.91■□□□□ 0.46
PCDHGA6-202ENST00000610583 CYB5RLQ6IPT4 315 aa17.9■□□□□ 0.46
PCDHGA6-202ENST00000610583 RWDD1Q9H446 243 aaPredicted RBP17.9■□□□□ 0.46
PCDHGA6-202ENST00000610583 ERICH6BQ5W0A0 696 aa17.9■□□□□ 0.46
PCDHGA6-202ENST00000610583 STK31Q9BXU1 1019 aa17.9■□□□□ 0.46
PCDHGA6-202ENST00000610583 UACAQ9BZF9 1416 aa17.89■□□□□ 0.45
PCDHGA6-202ENST00000610583 ZNF330Q9Y3S2 320 aaPredicted RBP17.89■□□□□ 0.45
PCDHGA6-202ENST00000610583 IGF1RP08069 1367 aa17.89■□□□□ 0.45
PCDHGA6-202ENST00000610583 ST20-MTHFSA0A0A6YYL1 179 aa17.88■□□□□ 0.45
PCDHGA6-202ENST00000610583 AMPHP49418 695 aa17.87■□□□□ 0.45
PCDHGA6-202ENST00000610583 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.87■□□□□ 0.45
PCDHGA6-202ENST00000610583 TULP1O00294 542 aaPredicted RBP17.87■□□□□ 0.45
PCDHGA6-202ENST00000610583 VGFO15240 615 aaPredicted RBP17.87■□□□□ 0.45
PCDHGA6-202ENST00000610583 PLCB2Q00722 1185 aa17.86■□□□□ 0.45
PCDHGA6-202ENST00000610583 CCDC146Q8IYE0 955 aa17.86■□□□□ 0.45
PCDHGA6-202ENST00000610583 DHX57Q6P158 1386 aaKnown RBP17.86■□□□□ 0.45
PCDHGA6-202ENST00000610583 NUTM2FA1L443 756 aa17.86■□□□□ 0.45
PCDHGA6-202ENST00000610583 GOLGA6L4A6NEF3 574 aa17.86■□□□□ 0.45
PCDHGA6-202ENST00000610583 SMC4Q9NTJ3 1288 aa17.86■□□□□ 0.45
PCDHGA6-202ENST00000610583 RAD54L2Q9Y4B4 1467 aa17.85■□□□□ 0.45
PCDHGA6-202ENST00000610583 LMOD3Q0VAK6 560 aa17.85■□□□□ 0.45
PCDHGA6-202ENST00000610583 KIAA1211Q6ZU35 1233 aa17.85■□□□□ 0.45
PCDHGA6-202ENST00000610583 KIF15Q9NS87 1388 aa17.85■□□□□ 0.45
PCDHGA6-202ENST00000610583 DNTTIP2Q5QJE6 756 aaKnown RBP17.85■□□□□ 0.45
PCDHGA6-202ENST00000610583 PHLDB1Q86UU1 1377 aa17.84■□□□□ 0.45
PCDHGA6-202ENST00000610583 CCDC9Q9Y3X0 531 aaKnown RBP17.83■□□□□ 0.45
PCDHGA6-202ENST00000610583 PDE3BQ13370 1112 aa17.83■□□□□ 0.44
PCDHGA6-202ENST00000610583 PANK3Q9H999 370 aa17.83■□□□□ 0.44
PCDHGA6-202ENST00000610583 PMFBP1Q8TBY8 1022 aa17.82■□□□□ 0.44
PCDHGA6-202ENST00000610583 HDAC5Q9UQL6 1122 aa17.81■□□□□ 0.44
PCDHGA6-202ENST00000610583 LTV1Q96GA3 475 aaPredicted RBP17.81■□□□□ 0.44
PCDHGA6-202ENST00000610583 MYBBP1AQ9BQG0 1328 aaKnown RBP17.8■□□□□ 0.44
PCDHGA6-202ENST00000610583 SPRYD3Q8NCJ5 442 aa17.8■□□□□ 0.44
PCDHGA6-202ENST00000610583 GOLGA6L6A8MZA4 724 aa17.8■□□□□ 0.44
PCDHGA6-202ENST00000610583 CENPJQ9HC77 1338 aaPredicted RBP17.79■□□□□ 0.44
PCDHGA6-202ENST00000610583 NCAPD3P42695 1498 aa17.79■□□□□ 0.44
PCDHGA6-202ENST00000610583 EVC2Q86UK5 1308 aa17.79■□□□□ 0.44
PCDHGA6-202ENST00000610583 MYOM3Q5VTT5 1437 aa17.79■□□□□ 0.44
PCDHGA6-202ENST00000610583 HMMRO75330 724 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms