RNA–Protein interactions for RNA: ENST00000604859.1

NEK4P3-201, Transcript of NIMA-related kinase 4 pseudogene 3, humanhuman

BASIC

Gene NEK4P3, Length 544 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4P3-201ENST00000604859 HECW1Q76N89 1606 aa21.23■□□□□ 0.99
NEK4P3-201ENST00000604859 LMTK3Q96Q04 1460 aa21.23■□□□□ 0.99
NEK4P3-201ENST00000604859 ARHGAP35Q9NRY4 1499 aa21.22■□□□□ 0.99
NEK4P3-201ENST00000604859 EFCAB2Q5VUJ9 269 aa21.22■□□□□ 0.99
NEK4P3-201ENST00000604859 SIGLEC1Q9BZZ2 1709 aa21.21■□□□□ 0.99
NEK4P3-201ENST00000604859 CHIC1Q5VXU3 224 aa21.2■□□□□ 0.98
NEK4P3-201ENST00000604859 PLPPR3Q6T4P5 718 aa21.2■□□□□ 0.98
NEK4P3-201ENST00000604859 MYO5CQ9NQX4 1742 aa21.19■□□□□ 0.98
NEK4P3-201ENST00000604859 MLECQ14165 292 aa21.19■□□□□ 0.98
NEK4P3-201ENST00000604859 ATP10AO60312 1499 aa21.16■□□□□ 0.98
NEK4P3-201ENST00000604859 HSPA2P54652 639 aa21.15■□□□□ 0.98
NEK4P3-201ENST00000604859 FER1L4A9Z1Z3 1794 aa21.14■□□□□ 0.97
NEK4P3-201ENST00000604859 KIF14Q15058 1648 aa21.14■□□□□ 0.97
NEK4P3-201ENST00000604859 TROQ12816 1431 aaPredicted RBP21.13■□□□□ 0.97
NEK4P3-201ENST00000604859 CLIP1P30622 1438 aa21.12■□□□□ 0.97
NEK4P3-201ENST00000604859 C9orf84Q5VXU9 1444 aa21.11■□□□□ 0.97
NEK4P3-201ENST00000604859 LRRIQ1Q96JM4 1722 aa21.1■□□□□ 0.97
NEK4P3-201ENST00000604859 AFAP1Q8N556 730 aa21.1■□□□□ 0.97
NEK4P3-201ENST00000604859 ARHGAP5Q13017 1502 aa21.09■□□□□ 0.97
NEK4P3-201ENST00000604859 ZNF518AQ6AHZ1 1483 aa21.09■□□□□ 0.97
NEK4P3-201ENST00000604859 ARHGEF12Q9NZN5 1544 aa21.08■□□□□ 0.96
NEK4P3-201ENST00000604859 MYT1LQ9UL68 1186 aa21.07■□□□□ 0.96
NEK4P3-201ENST00000604859 CDC42BPBQ9Y5S2 1711 aa21.04■□□□□ 0.96
NEK4P3-201ENST00000604859 KDM5CP41229 1560 aa21.04■□□□□ 0.96
NEK4P3-201ENST00000604859 CEBPAP49715 358 aaPredicted RBP21.03■□□□□ 0.96
NEK4P3-201ENST00000604859 CASKIN1Q8WXD9 1431 aa21.01■□□□□ 0.95
NEK4P3-201ENST00000604859 SETD1BQ9UPS6 1966 aaKnown RBP21■□□□□ 0.95
NEK4P3-201ENST00000604859 CCDC18Q5T9S5 1454 aa21■□□□□ 0.95
NEK4P3-201ENST00000604859 PREX1Q8TCU6 1659 aa20.99■□□□□ 0.95
NEK4P3-201ENST00000604859 MLH3Q9UHC1 1453 aa20.98■□□□□ 0.95
NEK4P3-201ENST00000604859 DIP2CQ9Y2E4 1556 aa20.97■□□□□ 0.95
NEK4P3-201ENST00000604859 PREX2Q70Z35 1606 aa20.97■□□□□ 0.95
NEK4P3-201ENST00000604859 CERKQ8TCT0 537 aa20.96■□□□□ 0.95
NEK4P3-201ENST00000604859 REREQ9P2R6 1566 aa20.96■□□□□ 0.95
NEK4P3-201ENST00000604859 TRAPPC8Q9Y2L5 1435 aa20.95■□□□□ 0.95
NEK4P3-201ENST00000604859 ABCC1P33527 1531 aa20.94■□□□□ 0.94
NEK4P3-201ENST00000604859 ABCA6Q8N139 1617 aa20.93■□□□□ 0.94
NEK4P3-201ENST00000604859 CDC42BPAQ5VT25 1732 aa20.92■□□□□ 0.94
NEK4P3-201ENST00000604859 ESF1Q9H501 851 aaKnown RBP20.92■□□□□ 0.94
NEK4P3-201ENST00000604859 DMRT2Q9Y5R5 561 aa20.92■□□□□ 0.94
NEK4P3-201ENST00000604859 ITSN2Q9NZM3 1697 aa20.92■□□□□ 0.94
NEK4P3-201ENST00000604859 AGLP35573 1532 aa20.9■□□□□ 0.94
NEK4P3-201ENST00000604859 FYCO1Q9BQS8 1478 aa20.9■□□□□ 0.94
NEK4P3-201ENST00000604859 UHRF1BP1Q6BDS2 1440 aa20.9■□□□□ 0.94
NEK4P3-201ENST00000604859 ZNF777Q9ULD5 760 aaPredicted RBP20.89■□□□□ 0.93
NEK4P3-201ENST00000604859 STRCQ7RTU9 1775 aa20.89■□□□□ 0.93
NEK4P3-201ENST00000604859 KIDINS220Q9ULH0 1771 aa20.89■□□□□ 0.93
NEK4P3-201ENST00000604859 C3P01024 1663 aa20.88■□□□□ 0.93
NEK4P3-201ENST00000604859 GPATCH8Q9UKJ3 1502 aaKnown RBP20.83■□□□□ 0.93
NEK4P3-201ENST00000604859 HNRNPMP52272 730 aaKnown RBP eCLIP20.83■□□□□ 0.93
NEK4P3-201ENST00000604859 SAMD9LQ8IVG5 1584 aa20.83■□□□□ 0.92
NEK4P3-201ENST00000604859 SPAG9O60271 1321 aaKnown RBP20.82■□□□□ 0.92
NEK4P3-201ENST00000604859 CNTLNQ9NXG0 1405 aa20.81■□□□□ 0.92
NEK4P3-201ENST00000604859 CFDP1Q9UEE9 299 aaPredicted RBP20.8■□□□□ 0.92
NEK4P3-201ENST00000604859 SYCP2Q9BX26 1530 aa20.79■□□□□ 0.92
NEK4P3-201ENST00000604859 PTPRTO14522 1441 aa20.78■□□□□ 0.92
NEK4P3-201ENST00000604859 KIAA1107Q9UPP5 1409 aa20.77■□□□□ 0.91
NEK4P3-201ENST00000604859 SUPT6HQ7KZ85 1726 aaKnown RBP20.76■□□□□ 0.91
NEK4P3-201ENST00000604859 CCNB3Q8WWL7 1395 aa20.76■□□□□ 0.91
NEK4P3-201ENST00000604859 PLEKHH2Q8IVE3 1493 aa20.75■□□□□ 0.91
NEK4P3-201ENST00000604859 ZMYM3Q14202 1370 aa20.75■□□□□ 0.91
NEK4P3-201ENST00000604859 MTUS2Q5JR59 1369 aa20.74■□□□□ 0.91
NEK4P3-201ENST00000604859 MROH2AA6NES4 1674 aa20.74■□□□□ 0.91
NEK4P3-201ENST00000604859 ATP7AQ04656 1500 aa20.73■□□□□ 0.91
NEK4P3-201ENST00000604859 NPATQ14207 1427 aa20.72■□□□□ 0.91
NEK4P3-201ENST00000604859 A2MP01023 1474 aa20.7■□□□□ 0.9
NEK4P3-201ENST00000604859 NCOA1Q15788 1441 aa20.7■□□□□ 0.9
NEK4P3-201ENST00000604859 INO80Q9ULG1 1556 aaPredicted RBP20.69■□□□□ 0.9
NEK4P3-201ENST00000604859 GGT6Q6P531 493 aa20.69■□□□□ 0.9
NEK4P3-201ENST00000604859 CLTCQ00610 1675 aaKnown RBP20.68■□□□□ 0.9
NEK4P3-201ENST00000604859 PLXNC1O60486 1568 aa20.68■□□□□ 0.9
NEK4P3-201ENST00000604859 ZNF644Q9H582 1327 aaPredicted RBP20.67■□□□□ 0.9
NEK4P3-201ENST00000604859 CAMSAP1Q5T5Y3 1602 aa20.67■□□□□ 0.9
NEK4P3-201ENST00000604859 PPP6R1Q9UPN7 881 aa20.66■□□□□ 0.9
NEK4P3-201ENST00000604859 ADGBQ8N7X0 1667 aa20.64■□□□□ 0.9
NEK4P3-201ENST00000604859 LTBP4Q8N2S1 1624 aa20.64■□□□□ 0.9
NEK4P3-201ENST00000604859 TIAM1Q13009 1591 aa20.63■□□□□ 0.89
NEK4P3-201ENST00000604859 NCKAP5LQ9HCH0 1330 aa20.63■□□□□ 0.89
NEK4P3-201ENST00000604859 MBD5Q9P267 1494 aa20.62■□□□□ 0.89
NEK4P3-201ENST00000604859 EHBP1L1Q8N3D4 1523 aa20.62■□□□□ 0.89
NEK4P3-201ENST00000604859 RTEL1-TNFRSF6BF6WH68 1400 aa20.61■□□□□ 0.89
NEK4P3-201ENST00000604859 PTPRKQ15262 1439 aa20.61■□□□□ 0.89
NEK4P3-201ENST00000604859 CEP162Q5TB80 1403 aa20.6■□□□□ 0.89
NEK4P3-201ENST00000604859 IQSEC2Q5JU85 1478 aa20.59■□□□□ 0.89
NEK4P3-201ENST00000604859 PKD2Q13563 968 aa20.59■□□□□ 0.89
NEK4P3-201ENST00000604859 MYO3AQ8NEV4 1616 aa20.58■□□□□ 0.89
NEK4P3-201ENST00000604859 DHX29Q7Z478 1369 aaKnown RBP20.58■□□□□ 0.88
NEK4P3-201ENST00000604859 ZNF142P52746 1687 aaPredicted RBP20.58■□□□□ 0.88
NEK4P3-201ENST00000604859 DISP3Q9P2K9 1392 aa20.57■□□□□ 0.88
NEK4P3-201ENST00000604859 CEP170BQ9Y4F5 1589 aaPredicted RBP20.56■□□□□ 0.88
NEK4P3-201ENST00000604859 PLA2R1Q13018 1463 aa20.56■□□□□ 0.88
NEK4P3-201ENST00000604859 RSPH4AQ5TD94 716 aa20.55■□□□□ 0.88
NEK4P3-201ENST00000604859 ZNF335Q9H4Z2 1342 aaPredicted RBP20.54■□□□□ 0.88
NEK4P3-201ENST00000604859 KIF3BO15066 747 aa20.53■□□□□ 0.88
NEK4P3-201ENST00000604859 TCOF1Q13428 1488 aaKnown RBP20.52■□□□□ 0.88
NEK4P3-201ENST00000604859 NCOA2Q15596 1464 aa20.51■□□□□ 0.87
NEK4P3-201ENST00000604859 CCDC141Q6ZP82 1450 aa20.5■□□□□ 0.87
NEK4P3-201ENST00000604859 A2ML1A8K2U0 1454 aa20.5■□□□□ 0.87
NEK4P3-201ENST00000604859 ILDR2Q71H61 639 aa20.49■□□□□ 0.87
NEK4P3-201ENST00000604859 CAMSAP2Q08AD1 1489 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms