RNA–Protein interactions for RNA: ENST00000604724.5

LINC01235-201, Transcript of long intergenic non-protein coding RNA 1235, humanhuman

TSL 2 BASIC

Gene LINC01235, Length 2,328 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01235-201ENST00000604724 SIN3AQ96ST3 1273 aa15.85■□□□□ 0.13
LINC01235-201ENST00000604724 ABCC10Q5T3U5 1492 aa15.85■□□□□ 0.13
LINC01235-201ENST00000604724 CDC42BPAQ5VT25 1732 aa15.84■□□□□ 0.13
LINC01235-201ENST00000604724 CFDP1Q9UEE9 299 aaPredicted RBP15.84■□□□□ 0.13
LINC01235-201ENST00000604724 ABCC2Q92887 1545 aa15.81■□□□□ 0.12
LINC01235-201ENST00000604724 NEUROD1Q13562 356 aa15.8■□□□□ 0.12
LINC01235-201ENST00000604724 ZNF777Q9ULD5 760 aaPredicted RBP15.8■□□□□ 0.12
LINC01235-201ENST00000604724 ROCK1Q13464 1354 aa15.78■□□□□ 0.12
LINC01235-201ENST00000604724 CROCC2H7BZ55 1655 aa15.77■□□□□ 0.12
LINC01235-201ENST00000604724 DENND4BO75064 1496 aaPredicted RBP15.77■□□□□ 0.11
LINC01235-201ENST00000604724 ADGBQ8N7X0 1667 aa15.74■□□□□ 0.11
LINC01235-201ENST00000604724 CDC42BPBQ9Y5S2 1711 aa15.74■□□□□ 0.11
LINC01235-201ENST00000604724 TTC37Q6PGP7 1564 aa15.74■□□□□ 0.11
LINC01235-201ENST00000604724 ZCCHC11Q5TAX3 1644 aaKnown RBP15.73■□□□□ 0.11
LINC01235-201ENST00000604724 TRIM52Q96A61 297 aa15.73■□□□□ 0.11
LINC01235-201ENST00000604724 PREX2Q70Z35 1606 aa15.73■□□□□ 0.11
LINC01235-201ENST00000604724 NCOA1Q15788 1441 aa15.72■□□□□ 0.11
LINC01235-201ENST00000604724 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.71■□□□□ 0.11
LINC01235-201ENST00000604724 UHRF1BP1LA0JNW5 1464 aa15.71■□□□□ 0.11
LINC01235-201ENST00000604724 ADGRL2O95490 1459 aa15.7■□□□□ 0.1
LINC01235-201ENST00000604724 SAMD9LQ8IVG5 1584 aa15.7■□□□□ 0.1
LINC01235-201ENST00000604724 KDM5BQ9UGL1 1544 aa15.69■□□□□ 0.1
LINC01235-201ENST00000604724 MPHOSPH9Q99550 1183 aa15.68■□□□□ 0.1
LINC01235-201ENST00000604724 TIMELESSQ9UNS1 1208 aa15.68■□□□□ 0.1
LINC01235-201ENST00000604724 MBD5Q9P267 1494 aa15.67■□□□□ 0.1
LINC01235-201ENST00000604724 HNRNPMP52272 730 aaKnown RBP eCLIP15.67■□□□□ 0.1
LINC01235-201ENST00000604724 SHANK2Q9UPX8 1470 aa15.67■□□□□ 0.1
LINC01235-201ENST00000604724 C9orf84Q5VXU9 1444 aa15.66■□□□□ 0.1
LINC01235-201ENST00000604724 KCNH8Q96L42 1107 aa15.66■□□□□ 0.1
LINC01235-201ENST00000604724 MYO5CQ9NQX4 1742 aa15.65■□□□□ 0.1
LINC01235-201ENST00000604724 ARHGEF5Q12774 1597 aa15.65■□□□□ 0.1
LINC01235-201ENST00000604724 TONSLQ96HA7 1378 aa15.65■□□□□ 0.1
LINC01235-201ENST00000604724 FOXD1Q16676 465 aa15.65■□□□□ 0.1
LINC01235-201ENST00000604724 ARHGAP5Q13017 1502 aa15.65■□□□□ 0.1
LINC01235-201ENST00000604724 ANKRD30AQ9BXX3 1397 aa15.65■□□□□ 0.1
LINC01235-201ENST00000604724 PPP1R15AO75807 674 aaPredicted RBP15.65■□□□□ 0.1
LINC01235-201ENST00000604724 SYCP2Q9BX26 1530 aa15.63■□□□□ 0.09
LINC01235-201ENST00000604724 PELP1Q8IZL8 1130 aaKnown RBP15.62■□□□□ 0.09
LINC01235-201ENST00000604724 PZPP20742 1482 aa15.61■□□□□ 0.09
LINC01235-201ENST00000604724 CCDC141Q6ZP82 1450 aa15.61■□□□□ 0.09
LINC01235-201ENST00000604724 ANKRD50Q9ULJ7 1429 aa15.61■□□□□ 0.09
LINC01235-201ENST00000604724 OSCARQ8IYS5 282 aa15.61■□□□□ 0.09
LINC01235-201ENST00000604724 TSPY4P0CV99 314 aa15.6■□□□□ 0.09
LINC01235-201ENST00000604724 TSPY10P0CW01 314 aa15.6■□□□□ 0.09
LINC01235-201ENST00000604724 SLC4A1APQ9BWU0 796 aaKnown RBP15.59■□□□□ 0.09
LINC01235-201ENST00000604724 MIER1Q8N108 512 aa15.59■□□□□ 0.09
LINC01235-201ENST00000604724 ANKRD30BQ9BXX2 1392 aa15.58■□□□□ 0.08
LINC01235-201ENST00000604724 KIF15Q9NS87 1388 aa15.58■□□□□ 0.08
LINC01235-201ENST00000604724 ACIN1Q9UKV3 1341 aaKnown RBP15.57■□□□□ 0.08
LINC01235-201ENST00000604724 PLCH2O75038 1416 aa15.57■□□□□ 0.08
LINC01235-201ENST00000604724 ARHGEF12Q9NZN5 1544 aa15.57■□□□□ 0.08
LINC01235-201ENST00000604724 WDR7Q9Y4E6 1490 aa15.55■□□□□ 0.08
LINC01235-201ENST00000604724 KIAA1107Q9UPP5 1409 aa15.53■□□□□ 0.08
LINC01235-201ENST00000604724 MAST1Q9Y2H9 1570 aa15.53■□□□□ 0.08
LINC01235-201ENST00000604724 RSPH4AQ5TD94 716 aa15.53■□□□□ 0.08
LINC01235-201ENST00000604724 RPRD2Q5VT52 1461 aaKnown RBP15.53■□□□□ 0.08
LINC01235-201ENST00000604724 MYT1Q01538 1121 aa15.52■□□□□ 0.08
LINC01235-201ENST00000604724 PLEKHH2Q8IVE3 1493 aa15.52■□□□□ 0.08
LINC01235-201ENST00000604724 ABCC1P33527 1531 aa15.52■□□□□ 0.08
LINC01235-201ENST00000604724 HIRIP3Q9BW71 556 aaPredicted RBP15.52■□□□□ 0.07
LINC01235-201ENST00000604724 NUP155O75694 1391 aa15.5■□□□□ 0.07
LINC01235-201ENST00000604724 EFCAB2Q5VUJ9 269 aa15.5■□□□□ 0.07
LINC01235-201ENST00000604724 KDM5DQ9BY66 1539 aa15.5■□□□□ 0.07
LINC01235-201ENST00000604724 AEBP2Q6ZN18 517 aaPredicted RBP15.5■□□□□ 0.07
LINC01235-201ENST00000604724 L3MBTL2Q969R5 705 aa15.5■□□□□ 0.07
LINC01235-201ENST00000604724 ASXL2Q76L83 1435 aa15.5■□□□□ 0.07
LINC01235-201ENST00000604724 PKD2Q13563 968 aa15.49■□□□□ 0.07
LINC01235-201ENST00000604724 TEX14Q8IWB6 1497 aa15.49■□□□□ 0.07
LINC01235-201ENST00000604724 PLXNC1O60486 1568 aa15.49■□□□□ 0.07
LINC01235-201ENST00000604724 ABCA9Q8IUA7 1624 aa15.48■□□□□ 0.07
LINC01235-201ENST00000604724 TRAPPC8Q9Y2L5 1435 aa15.48■□□□□ 0.07
LINC01235-201ENST00000604724 ARAP3Q8WWN8 1544 aa15.48■□□□□ 0.07
LINC01235-201ENST00000604724 FAM135AQ9P2D6 1515 aa15.44■□□□□ 0.06
LINC01235-201ENST00000604724 FANCAO15360 1455 aa15.43■□□□□ 0.06
LINC01235-201ENST00000604724 UNC13BO14795 1591 aa15.43■□□□□ 0.06
LINC01235-201ENST00000604724 DUOX2Q9NRD8 1548 aa15.42■□□□□ 0.06
LINC01235-201ENST00000604724 AFAP1Q8N556 730 aa15.42■□□□□ 0.06
LINC01235-201ENST00000604724 ZFYVE16Q7Z3T8 1539 aa15.41■□□□□ 0.06
LINC01235-201ENST00000604724 DDX10Q13206 875 aaKnown RBP15.4■□□□□ 0.06
LINC01235-201ENST00000604724 NBPF8Q3BBV2 869 aa15.4■□□□□ 0.06
LINC01235-201ENST00000604724 YTHDC1Q96MU7 727 aaKnown RBP15.4■□□□□ 0.06
LINC01235-201ENST00000604724 NPM1P06748 294 aaKnown RBP eCLIP15.39■□□□□ 0.05
LINC01235-201ENST00000604724 ERBINQ96RT1 1412 aa15.38■□□□□ 0.05
LINC01235-201ENST00000604724 ADGRL1O94910 1474 aa15.38■□□□□ 0.05
LINC01235-201ENST00000604724 SPAG9O60271 1321 aaKnown RBP15.38■□□□□ 0.05
LINC01235-201ENST00000604724 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.38■□□□□ 0.05
LINC01235-201ENST00000604724 IQGAP3Q86VI3 1631 aa15.37■□□□□ 0.05
LINC01235-201ENST00000604724 MAGI2Q86UL8 1455 aa15.36■□□□□ 0.05
LINC01235-201ENST00000604724 INO80Q9ULG1 1556 aaPredicted RBP15.36■□□□□ 0.05
LINC01235-201ENST00000604724 HSPA5P11021 654 aaKnown RBP15.35■□□□□ 0.05
LINC01235-201ENST00000604724 RTEL1-TNFRSF6BF6WH68 1400 aa15.35■□□□□ 0.05
LINC01235-201ENST00000604724 SCAPERQ9BY12 1400 aa15.35■□□□□ 0.05
LINC01235-201ENST00000604724 ATP7AQ04656 1500 aa15.34■□□□□ 0.05
LINC01235-201ENST00000604724 EIF4G2P78344 907 aaKnown RBP eCLIP15.32■□□□□ 0.04
LINC01235-201ENST00000604724 PLA2R1Q13018 1463 aa15.32■□□□□ 0.04
LINC01235-201ENST00000604724 CENPBP07199 599 aaPredicted RBP15.31■□□□□ 0.04
LINC01235-201ENST00000604724 CD109Q6YHK3 1445 aa15.31■□□□□ 0.04
LINC01235-201ENST00000604724 ZNF326Q5BKZ1 582 aaKnown RBP15.3■□□□□ 0.04
LINC01235-201ENST00000604724 RIMBP3CA6NJZ7 1639 aa15.29■□□□□ 0.04
LINC01235-201ENST00000604724 RIMBP3BA6NNM3 1639 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms