RNA–Protein interactions for RNA: ENST00000603639.5

NEB-218, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 25,578 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-218ENST00000603639 NAP1L2Q9ULW6 460 aaPredicted RBP4.26□□□□□ -1.73
NEB-218ENST00000603639 ARID3AQ99856 593 aa4.26□□□□□ -1.73
NEB-218ENST00000603639 EIF3DO15371 548 aaKnown RBP eCLIP4.26□□□□□ -1.73
NEB-218ENST00000603639 FAM107BQ9H098 131 aa4.26□□□□□ -1.73
NEB-218ENST00000603639 AMER1Q5JTC6 1135 aaPredicted RBP4.26□□□□□ -1.73
NEB-218ENST00000603639 ATP6V1DQ9Y5K8 247 aa4.26□□□□□ -1.73
NEB-218ENST00000603639 MCM5P33992 734 aa4.26□□□□□ -1.73
NEB-218ENST00000603639 TUBBP07437 444 aa4.26□□□□□ -1.73
NEB-218ENST00000603639 CCDC70Q6NSX1 233 aa4.26□□□□□ -1.73
NEB-218ENST00000603639 HDGFP51858 240 aaKnown RBP4.26□□□□□ -1.73
NEB-218ENST00000603639 PODXL2Q9NZ53 605 aa4.25□□□□□ -1.73
NEB-218ENST00000603639 CANXP27824 592 aaKnown RBP4.25□□□□□ -1.73
NEB-218ENST00000603639 CWC15Q9P013 229 aaKnown RBP4.25□□□□□ -1.73
NEB-218ENST00000603639 PMFBP1Q8TBY8 1022 aa4.25□□□□□ -1.73
NEB-218ENST00000603639 AXDND1Q5T1B0 1012 aaPredicted RBP4.25□□□□□ -1.73
NEB-218ENST00000603639 GTPBP4Q9BZE4 634 aaKnown RBP4.25□□□□□ -1.73
NEB-218ENST00000603639 KIAA1211Q6ZU35 1233 aa4.25□□□□□ -1.73
NEB-218ENST00000603639 BCL11BQ9C0K0 894 aaPredicted RBP4.25□□□□□ -1.73
NEB-218ENST00000603639 ZMYND15Q9H091 742 aa4.25□□□□□ -1.73
NEB-218ENST00000603639 PAXBP1Q9Y5B6 917 aa4.25□□□□□ -1.73
NEB-218ENST00000603639 TSHZ2Q9NRE2 1034 aa4.25□□□□□ -1.73
NEB-218ENST00000603639 NUCB2P80303 420 aa4.25□□□□□ -1.73
NEB-218ENST00000603639 MNS1Q8NEH6 495 aa4.25□□□□□ -1.73
NEB-218ENST00000603639 WDR43Q15061 677 aaKnown RBP eCLIP4.24□□□□□ -1.73
NEB-218ENST00000603639 KIF21AQ7Z4S6 1674 aa4.24□□□□□ -1.73
NEB-218ENST00000603639 CDR1P51861 262 aa4.23□□□□□ -1.73
NEB-218ENST00000603639 GOLGA6L10A0A0M3HER8 536 aa4.23□□□□□ -1.73
NEB-218ENST00000603639 GOLGA6L10A6NI86 522 aa4.23□□□□□ -1.73
NEB-218ENST00000603639 GOLGA6L19H0YKK7 550 aa4.23□□□□□ -1.73
NEB-218ENST00000603639 SENP3-EIF4A1A0A087X0R7 540 aa4.23□□□□□ -1.73
NEB-218ENST00000603639 PRKCSHP14314 528 aaPredicted RBP4.23□□□□□ -1.73
NEB-218ENST00000603639 PES1O00541 588 aaKnown RBP4.23□□□□□ -1.73
NEB-218ENST00000603639 PDE4AP27815 886 aa4.23□□□□□ -1.73
NEB-218ENST00000603639 IRX6P78412 446 aaPredicted RBP4.23□□□□□ -1.73
NEB-218ENST00000603639 STAC3Q96MF2 364 aa4.23□□□□□ -1.73
NEB-218ENST00000603639 DDX11L8A8MPP1 907 aa4.23□□□□□ -1.73
NEB-218ENST00000603639 PAIP2Q9BPZ3 127 aaKnown RBP4.23□□□□□ -1.73
NEB-218ENST00000603639 BCCIPQ9P287 314 aaKnown RBP eCLIP4.23□□□□□ -1.73
NEB-218ENST00000603639 DNAJC2Q99543 621 aaKnown RBP4.22□□□□□ -1.73
NEB-218ENST00000603639 RDXP35241 583 aaKnown RBP4.22□□□□□ -1.73
NEB-218ENST00000603639 PLEKHG5O94827 1062 aa4.22□□□□□ -1.73
NEB-218ENST00000603639 HMMRO75330 724 aa4.22□□□□□ -1.73
NEB-218ENST00000603639 CHMP3Q9Y3E7 222 aa4.22□□□□□ -1.73
NEB-218ENST00000603639 HSP90B1P14625 803 aaKnown RBP4.22□□□□□ -1.73
NEB-218ENST00000603639 CCDC66A2RUB6 948 aa4.22□□□□□ -1.73
NEB-218ENST00000603639 PLCB2Q00722 1185 aa4.22□□□□□ -1.73
NEB-218ENST00000603639 CHMP5Q9NZZ3 219 aa4.22□□□□□ -1.73
NEB-218ENST00000603639 KIF3CO14782 793 aa4.22□□□□□ -1.73
NEB-218ENST00000603639 CTR9Q6PD62 1173 aa4.22□□□□□ -1.73
NEB-218ENST00000603639 HOOK1Q9UJC3 728 aaKnown RBP4.22□□□□□ -1.73
NEB-218ENST00000603639 WDR97A6NE52 1622 aa4.22□□□□□ -1.73
NEB-218ENST00000603639 FHAD1B1AJZ9 1412 aa4.21□□□□□ -1.73
NEB-218ENST00000603639 C11orf95C9JLR9 678 aaPredicted RBP4.21□□□□□ -1.73
NEB-218ENST00000603639 SCAPERQ9BY12 1400 aa4.21□□□□□ -1.74
NEB-218ENST00000603639 MCM2P49736 904 aa4.21□□□□□ -1.74
NEB-218ENST00000603639 FAM193AP78312 1265 aa4.21□□□□□ -1.74
NEB-218ENST00000603639 AK7Q96M32 723 aa4.21□□□□□ -1.74
NEB-218ENST00000603639 WWC1Q8IX03 1113 aa4.21□□□□□ -1.74
NEB-218ENST00000603639 RSF1Q96T23 1441 aaPredicted RBP4.21□□□□□ -1.74
NEB-218ENST00000603639 TRAK2O60296 914 aa4.21□□□□□ -1.74
NEB-218ENST00000603639 PPP1R15AO75807 674 aaPredicted RBP4.21□□□□□ -1.74
NEB-218ENST00000603639 MCCP23508 829 aa4.21□□□□□ -1.74
NEB-218ENST00000603639 ZNF771Q7L3S4 317 aaPredicted RBP4.21□□□□□ -1.74
NEB-218ENST00000603639 RCAN3Q9UKA8 241 aa4.21□□□□□ -1.74
NEB-218ENST00000603639 CEP164Q9UPV0 1460 aa4.21□□□□□ -1.74
NEB-218ENST00000603639 MRS2Q9HD23 443 aa4.2□□□□□ -1.74
NEB-218ENST00000603639 HMGB1P1B2RPK0 211 aaPredicted RBP4.2□□□□□ -1.74
NEB-218ENST00000603639 KNSTRNQ9Y448 316 aa4.2□□□□□ -1.74
NEB-218ENST00000603639 TERF1P54274 439 aa4.2□□□□□ -1.74
NEB-218ENST00000603639 RALBP1Q15311 655 aa4.2□□□□□ -1.74
NEB-218ENST00000603639 UVSSAQ2YD98 709 aa4.2□□□□□ -1.74
NEB-218ENST00000603639 KLHL34Q8N239 644 aa4.2□□□□□ -1.74
NEB-218ENST00000603639 CCP110O43303 1012 aa4.2□□□□□ -1.74
NEB-218ENST00000603639 NAT10Q9H0A0 1025 aaKnown RBP4.2□□□□□ -1.74
NEB-218ENST00000603639 TSPY4P0CV99 314 aa4.2□□□□□ -1.74
NEB-218ENST00000603639 TSPY10P0CW01 314 aa4.2□□□□□ -1.74
NEB-218ENST00000603639 AEBP2Q6ZN18 517 aaPredicted RBP4.2□□□□□ -1.74
NEB-218ENST00000603639 C10orf67Q8IYJ2 551 aa4.19□□□□□ -1.74
NEB-218ENST00000603639 USP8P40818 1118 aa4.19□□□□□ -1.74
NEB-218ENST00000603639 CAGE1Q8TC20 777 aa4.19□□□□□ -1.74
NEB-218ENST00000603639 FEZ1Q99689 392 aa4.19□□□□□ -1.74
NEB-218ENST00000603639 V9GYY5 206 aaPredicted RBP4.19□□□□□ -1.74
NEB-218ENST00000603639 SETSIPP0DME0 302 aa4.19□□□□□ -1.74
NEB-218ENST00000603639 PDE4CQ08493 712 aa4.19□□□□□ -1.74
NEB-218ENST00000603639 HMGB3O15347 200 aaKnown RBP4.18□□□□□ -1.74
NEB-218ENST00000603639 FAM13BQ9NYF5 915 aa4.18□□□□□ -1.74
NEB-218ENST00000603639 U2SURPO15042 1029 aaKnown RBP4.18□□□□□ -1.74
NEB-218ENST00000603639 ERCC6Q03468 1493 aa4.18□□□□□ -1.74
NEB-218ENST00000603639 MFAP1P55081 439 aaKnown RBP4.18□□□□□ -1.74
NEB-218ENST00000603639 TUBB2AQ13885 445 aa4.18□□□□□ -1.74
NEB-218ENST00000603639 TUBB2BQ9BVA1 445 aa4.18□□□□□ -1.74
NEB-218ENST00000603639 CCDC39Q9UFE4 941 aa4.18□□□□□ -1.74
NEB-218ENST00000603639 HOMEZQ8IX15 550 aa4.18□□□□□ -1.74
NEB-218ENST00000603639 DYDC1Q8WWB3 177 aa4.18□□□□□ -1.74
NEB-218ENST00000603639 CFAP53Q96M91 514 aa4.18□□□□□ -1.74
NEB-218ENST00000603639 TAF7LQ5H9L4 462 aa4.18□□□□□ -1.74
NEB-218ENST00000603639 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.18□□□□□ -1.74
NEB-218ENST00000603639 NPHP1O15259 732 aa4.18□□□□□ -1.74
NEB-218ENST00000603639 ARXQ96QS3 562 aa4.18□□□□□ -1.74
NEB-218ENST00000603639 NEFHP12036 1026 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms