RNA–Protein interactions for RNA: ENST00000602841.5

SCNM1-207, Transcript of sodium channel modifier 1, humanhuman

TSL 3

Gene SCNM1, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-207ENST00000602841 ARAP3Q8WWN8 1544 aa16.65■□□□□ 0.26
SCNM1-207ENST00000602841 NCOA2Q15596 1464 aa16.64■□□□□ 0.25
SCNM1-207ENST00000602841 MADDQ8WXG6 1647 aa16.63■□□□□ 0.25
SCNM1-207ENST00000602841 RRBP1Q9P2E9 1410 aaKnown RBP16.62■□□□□ 0.25
SCNM1-207ENST00000602841 PLEKHD1A6NEE1 506 aa16.61■□□□□ 0.25
SCNM1-207ENST00000602841 ARID4BQ4LE39 1312 aaPredicted RBP16.61■□□□□ 0.25
SCNM1-207ENST00000602841 BCORL1Q5H9F3 1711 aa16.61■□□□□ 0.25
SCNM1-207ENST00000602841 CDK11AQ9UQ88 783 aaPredicted RBP16.6■□□□□ 0.25
SCNM1-207ENST00000602841 RAPGEF3O95398 923 aa16.59■□□□□ 0.25
SCNM1-207ENST00000602841 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.58■□□□□ 0.24
SCNM1-207ENST00000602841 HNRNPUL2Q1KMD3 747 aaKnown RBP16.58■□□□□ 0.24
SCNM1-207ENST00000602841 KIF14Q15058 1648 aa16.58■□□□□ 0.24
SCNM1-207ENST00000602841 PLPPR3Q6T4P5 718 aa16.57■□□□□ 0.24
SCNM1-207ENST00000602841 PCGF6Q9BYE7 350 aa16.57■□□□□ 0.24
SCNM1-207ENST00000602841 SUPT6HQ7KZ85 1726 aaKnown RBP16.56■□□□□ 0.24
SCNM1-207ENST00000602841 MYOM3Q5VTT5 1437 aa16.54■□□□□ 0.24
SCNM1-207ENST00000602841 GPATCH8Q9UKJ3 1502 aaKnown RBP16.54■□□□□ 0.24
SCNM1-207ENST00000602841 FGD6Q6ZV73 1430 aa16.53■□□□□ 0.24
SCNM1-207ENST00000602841 CCNB3Q8WWL7 1395 aa16.52■□□□□ 0.24
SCNM1-207ENST00000602841 RIMS1Q86UR5 1692 aaKnown RBP16.52■□□□□ 0.23
SCNM1-207ENST00000602841 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.51■□□□□ 0.23
SCNM1-207ENST00000602841 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.51■□□□□ 0.23
SCNM1-207ENST00000602841 TCOF1Q13428 1488 aaKnown RBP16.51■□□□□ 0.23
SCNM1-207ENST00000602841 MIA2Q96PC5 1412 aa16.5■□□□□ 0.23
SCNM1-207ENST00000602841 YEATS2Q9ULM3 1422 aa16.47■□□□□ 0.23
SCNM1-207ENST00000602841 TTC37Q6PGP7 1564 aa16.47■□□□□ 0.23
SCNM1-207ENST00000602841 DMRT2Q9Y5R5 561 aa16.46■□□□□ 0.23
SCNM1-207ENST00000602841 ZNF644Q9H582 1327 aaPredicted RBP16.45■□□□□ 0.22
SCNM1-207ENST00000602841 PTPRKQ15262 1439 aa16.45■□□□□ 0.22
SCNM1-207ENST00000602841 PLCH2O75038 1416 aa16.43■□□□□ 0.22
SCNM1-207ENST00000602841 FRMPD1Q5SYB0 1578 aa16.43■□□□□ 0.22
SCNM1-207ENST00000602841 CDC42BPAQ5VT25 1732 aa16.42■□□□□ 0.22
SCNM1-207ENST00000602841 PTPN23Q9H3S7 1636 aa16.42■□□□□ 0.22
SCNM1-207ENST00000602841 ABCA9Q8IUA7 1624 aa16.41■□□□□ 0.22
SCNM1-207ENST00000602841 CDC42BPBQ9Y5S2 1711 aa16.39■□□□□ 0.21
SCNM1-207ENST00000602841 CFDP1Q9UEE9 299 aaPredicted RBP16.39■□□□□ 0.21
SCNM1-207ENST00000602841 STRCQ7RTU9 1775 aa16.38■□□□□ 0.21
SCNM1-207ENST00000602841 PREX2Q70Z35 1606 aa16.38■□□□□ 0.21
SCNM1-207ENST00000602841 NEO1Q92859 1461 aa16.38■□□□□ 0.21
SCNM1-207ENST00000602841 MBD5Q9P267 1494 aa16.37■□□□□ 0.21
SCNM1-207ENST00000602841 FAM50AQ14320 339 aaKnown RBP16.37■□□□□ 0.21
SCNM1-207ENST00000602841 LTBP4Q8N2S1 1624 aa16.37■□□□□ 0.21
SCNM1-207ENST00000602841 ABCC5O15440 1437 aa16.36■□□□□ 0.21
SCNM1-207ENST00000602841 CAMSAP2Q08AD1 1489 aa16.36■□□□□ 0.21
SCNM1-207ENST00000602841 ARHGEF40Q8TER5 1519 aa16.36■□□□□ 0.21
SCNM1-207ENST00000602841 POGZQ7Z3K3 1410 aa16.36■□□□□ 0.21
SCNM1-207ENST00000602841 ARHGEF12Q9NZN5 1544 aa16.35■□□□□ 0.21
SCNM1-207ENST00000602841 SAMD9LQ8IVG5 1584 aa16.35■□□□□ 0.21
SCNM1-207ENST00000602841 ITSN2Q9NZM3 1697 aa16.35■□□□□ 0.21
SCNM1-207ENST00000602841 MLECQ14165 292 aa16.35■□□□□ 0.21
SCNM1-207ENST00000602841 PTPRTO14522 1441 aa16.34■□□□□ 0.21
SCNM1-207ENST00000602841 IQSEC2Q5JU85 1478 aa16.34■□□□□ 0.21
SCNM1-207ENST00000602841 CEBPAP49715 358 aaPredicted RBP16.33■□□□□ 0.2
SCNM1-207ENST00000602841 SIGLEC1Q9BZZ2 1709 aa16.31■□□□□ 0.2
SCNM1-207ENST00000602841 FANCAO15360 1455 aa16.31■□□□□ 0.2
SCNM1-207ENST00000602841 DAPK1P53355 1430 aa16.31■□□□□ 0.2
SCNM1-207ENST00000602841 KIAA1107Q9UPP5 1409 aa16.31■□□□□ 0.2
SCNM1-207ENST00000602841 MYO5CQ9NQX4 1742 aa16.31■□□□□ 0.2
SCNM1-207ENST00000602841 HNRNPMP52272 730 aaKnown RBP eCLIP16.3■□□□□ 0.2
SCNM1-207ENST00000602841 ZNF777Q9ULD5 760 aaPredicted RBP16.3■□□□□ 0.2
SCNM1-207ENST00000602841 DNMT1P26358 1616 aaKnown RBP16.3■□□□□ 0.2
SCNM1-207ENST00000602841 AKNAQ7Z591 1439 aa16.29■□□□□ 0.2
SCNM1-207ENST00000602841 ITGAEP38570 1179 aa16.29■□□□□ 0.2
SCNM1-207ENST00000602841 EFCAB2Q5VUJ9 269 aa16.29■□□□□ 0.2
SCNM1-207ENST00000602841 ARHGAP5Q13017 1502 aa16.29■□□□□ 0.2
SCNM1-207ENST00000602841 DENND4BO75064 1496 aaPredicted RBP16.28■□□□□ 0.2
SCNM1-207ENST00000602841 PREX1Q8TCU6 1659 aa16.27■□□□□ 0.2
SCNM1-207ENST00000602841 ARHGEF5Q12774 1597 aa16.27■□□□□ 0.2
SCNM1-207ENST00000602841 UBAP1LF5GYI3 381 aa16.27■□□□□ 0.2
SCNM1-207ENST00000602841 ABCC1P33527 1531 aa16.26■□□□□ 0.19
SCNM1-207ENST00000602841 TRAPPC8Q9Y2L5 1435 aa16.26■□□□□ 0.19
SCNM1-207ENST00000602841 HFM1A2PYH4 1435 aa16.24■□□□□ 0.19
SCNM1-207ENST00000602841 NAIPQ13075 1403 aa16.24■□□□□ 0.19
SCNM1-207ENST00000602841 UHRF1BP1Q6BDS2 1440 aa16.24■□□□□ 0.19
SCNM1-207ENST00000602841 ROCK1Q13464 1354 aa16.24■□□□□ 0.19
SCNM1-207ENST00000602841 SYCP2Q9BX26 1530 aa16.24■□□□□ 0.19
SCNM1-207ENST00000602841 ADGRL2O95490 1459 aa16.23■□□□□ 0.19
SCNM1-207ENST00000602841 PLEKHH2Q8IVE3 1493 aa16.23■□□□□ 0.19
SCNM1-207ENST00000602841 MED1Q15648 1581 aaPredicted RBP16.23■□□□□ 0.19
SCNM1-207ENST00000602841 RSPH4AQ5TD94 716 aa16.23■□□□□ 0.19
SCNM1-207ENST00000602841 CHIC2Q9UKJ5 165 aa16.23■□□□□ 0.19
SCNM1-207ENST00000602841 FER1L4A9Z1Z3 1794 aa16.23■□□□□ 0.19
SCNM1-207ENST00000602841 RICTORQ6R327 1708 aa16.22■□□□□ 0.19
SCNM1-207ENST00000602841 NCOA1Q15788 1441 aa16.21■□□□□ 0.19
SCNM1-207ENST00000602841 SETD5Q9C0A6 1442 aa16.21■□□□□ 0.19
SCNM1-207ENST00000602841 HRCP23327 699 aa16.21■□□□□ 0.19
SCNM1-207ENST00000602841 SHANK2Q9UPX8 1470 aa16.21■□□□□ 0.19
SCNM1-207ENST00000602841 ZFYVE16Q7Z3T8 1539 aa16.2■□□□□ 0.18
SCNM1-207ENST00000602841 CCDC141Q6ZP82 1450 aa16.2■□□□□ 0.18
SCNM1-207ENST00000602841 CROCC2H7BZ55 1655 aa16.2■□□□□ 0.18
SCNM1-207ENST00000602841 SCAPERQ9BY12 1400 aa16.19■□□□□ 0.18
SCNM1-207ENST00000602841 MAST1Q9Y2H9 1570 aa16.19■□□□□ 0.18
SCNM1-207ENST00000602841 RAB3GAP2Q9H2M9 1393 aa16.19■□□□□ 0.18
SCNM1-207ENST00000602841 HSPA1LP34931 641 aa16.19■□□□□ 0.18
SCNM1-207ENST00000602841 AFAP1Q8N556 730 aa16.19■□□□□ 0.18
SCNM1-207ENST00000602841 ZMYM4Q5VZL5 1548 aa16.19■□□□□ 0.18
SCNM1-207ENST00000602841 RRP7BPQ9NSQ0 103 aa16.18■□□□□ 0.18
SCNM1-207ENST00000602841 C9orf84Q5VXU9 1444 aa16.18■□□□□ 0.18
SCNM1-207ENST00000602841 MAGI2Q86UL8 1455 aa16.16■□□□□ 0.18
SCNM1-207ENST00000602841 ZNF335Q9H4Z2 1342 aaPredicted RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms