RNA–Protein interactions for RNA: ENST00000602253.5

ZNF546-209, Transcript of zinc finger protein 546, humanhuman

TSL 3

Gene ZNF546, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546-209ENST00000602253 PCF11O94913 1555 aaKnown RBP7.85□□□□□ -1.15
ZNF546-209ENST00000602253 C19orf67A6NJJ6 358 aa7.85□□□□□ -1.15
ZNF546-209ENST00000602253 MAP3K4Q9Y6R4 1608 aa7.85□□□□□ -1.15
ZNF546-209ENST00000602253 EPRSP07814 1512 aaKnown RBP7.83□□□□□ -1.16
ZNF546-209ENST00000602253 RUSC2Q8N2Y8 1516 aa7.83□□□□□ -1.16
ZNF546-209ENST00000602253 KIAA0586Q9BVV6 1533 aa7.83□□□□□ -1.16
ZNF546-209ENST00000602253 TTBK1Q5TCY1 1321 aaPredicted RBP7.82□□□□□ -1.16
ZNF546-209ENST00000602253 HSPA2P54652 639 aa7.82□□□□□ -1.16
ZNF546-209ENST00000602253 ADAMTSL3P82987 1691 aa7.81□□□□□ -1.16
ZNF546-209ENST00000602253 KIF21BO75037 1637 aa7.81□□□□□ -1.16
ZNF546-209ENST00000602253 TNIKQ9UKE5 1360 aa7.8□□□□□ -1.16
ZNF546-209ENST00000602253 CUL7Q14999 1698 aa7.79□□□□□ -1.16
ZNF546-209ENST00000602253 MNX1P50219 401 aaPredicted RBP7.79□□□□□ -1.16
ZNF546-209ENST00000602253 UHRF1BP1LA0JNW5 1464 aa7.79□□□□□ -1.16
ZNF546-209ENST00000602253 CD44P16070 742 aaKnown RBP7.78□□□□□ -1.16
ZNF546-209ENST00000602253 CARMIL2Q6F5E8 1435 aa7.78□□□□□ -1.16
ZNF546-209ENST00000602253 UACAQ9BZF9 1416 aa7.78□□□□□ -1.16
ZNF546-209ENST00000602253 MAGI3Q5TCQ9 1506 aa7.77□□□□□ -1.17
ZNF546-209ENST00000602253 CD109Q6YHK3 1445 aa7.77□□□□□ -1.17
ZNF546-209ENST00000602253 KDM5BQ9UGL1 1544 aa7.76□□□□□ -1.17
ZNF546-209ENST00000602253 ARID4BQ4LE39 1312 aaPredicted RBP7.76□□□□□ -1.17
ZNF546-209ENST00000602253 MIER1Q8N108 512 aa7.75□□□□□ -1.17
ZNF546-209ENST00000602253 KCNH8Q96L42 1107 aa7.74□□□□□ -1.17
ZNF546-209ENST00000602253 BCORL1Q5H9F3 1711 aa7.73□□□□□ -1.17
ZNF546-209ENST00000602253 ARAP3Q8WWN8 1544 aa7.73□□□□□ -1.17
ZNF546-209ENST00000602253 CFAP43Q8NDM7 1665 aa7.72□□□□□ -1.17
ZNF546-209ENST00000602253 PHLDB1Q86UU1 1377 aa7.71□□□□□ -1.17
ZNF546-209ENST00000602253 MADDQ8WXG6 1647 aa7.71□□□□□ -1.17
ZNF546-209ENST00000602253 WDR7Q9Y4E6 1490 aa7.71□□□□□ -1.18
ZNF546-209ENST00000602253 PLCD3Q8N3E9 789 aa7.71□□□□□ -1.18
ZNF546-209ENST00000602253 ZCCHC11Q5TAX3 1644 aaKnown RBP7.7□□□□□ -1.18
ZNF546-209ENST00000602253 BIVM-ERCC5R4GMW8 1640 aa7.7□□□□□ -1.18
ZNF546-209ENST00000602253 YEATS2Q9ULM3 1422 aa7.7□□□□□ -1.18
ZNF546-209ENST00000602253 ZRANB1Q9UGI0 708 aa7.7□□□□□ -1.18
ZNF546-209ENST00000602253 GABBR2O75899 941 aa7.69□□□□□ -1.18
ZNF546-209ENST00000602253 RAPGEF3O95398 923 aa7.69□□□□□ -1.18
ZNF546-209ENST00000602253 RIMS1Q86UR5 1692 aaKnown RBP7.69□□□□□ -1.18
ZNF546-209ENST00000602253 FBXO3Q9UK99 471 aa7.68□□□□□ -1.18
ZNF546-209ENST00000602253 IGF1RP08069 1367 aa7.68□□□□□ -1.18
ZNF546-209ENST00000602253 IQSEC2Q5JU85 1478 aa7.68□□□□□ -1.18
ZNF546-209ENST00000602253 PLEKHG5O94827 1062 aa7.67□□□□□ -1.18
ZNF546-209ENST00000602253 SETD1BQ9UPS6 1966 aaKnown RBP7.66□□□□□ -1.18
ZNF546-209ENST00000602253 STRCQ7RTU9 1775 aa7.65□□□□□ -1.18
ZNF546-209ENST00000602253 POGZQ7Z3K3 1410 aa7.65□□□□□ -1.18
ZNF546-209ENST00000602253 ZNF579Q8NAF0 562 aaKnown RBP7.65□□□□□ -1.18
ZNF546-209ENST00000602253 PTPRTO14522 1441 aa7.64□□□□□ -1.19
ZNF546-209ENST00000602253 UBAP1LF5GYI3 381 aa7.64□□□□□ -1.19
ZNF546-209ENST00000602253 VASPP50552 380 aaPredicted RBP7.64□□□□□ -1.19
ZNF546-209ENST00000602253 PHF12Q96QT6 1004 aa7.64□□□□□ -1.19
ZNF546-209ENST00000602253 DISP1Q96F81 1524 aa7.63□□□□□ -1.19
ZNF546-209ENST00000602253 PAK3O75914 559 aaPredicted RBP7.63□□□□□ -1.19
ZNF546-209ENST00000602253 RASEFQ8IZ41 740 aa7.63□□□□□ -1.19
ZNF546-209ENST00000602253 TSPYL2Q9H2G4 693 aaPredicted RBP7.63□□□□□ -1.19
ZNF546-209ENST00000602253 PLSCR2Q9NRY7 297 aa7.62□□□□□ -1.19
ZNF546-209ENST00000602253 LTBP4Q8N2S1 1624 aa7.62□□□□□ -1.19
ZNF546-209ENST00000602253 IQGAP2Q13576 1575 aa7.62□□□□□ -1.19
ZNF546-209ENST00000602253 PREX1Q8TCU6 1659 aa7.6□□□□□ -1.19
ZNF546-209ENST00000602253 CARMIL1Q5VZK9 1371 aa7.6□□□□□ -1.19
ZNF546-209ENST00000602253 MLECQ14165 292 aa7.6□□□□□ -1.19
ZNF546-209ENST00000602253 MED1Q15648 1581 aaPredicted RBP7.59□□□□□ -1.19
ZNF546-209ENST00000602253 NUBP1P53384 320 aa7.59□□□□□ -1.19
ZNF546-209ENST00000602253 ZBTB47Q9UFB7 747 aaPredicted RBP7.59□□□□□ -1.19
ZNF546-209ENST00000602253 NEO1Q92859 1461 aa7.59□□□□□ -1.19
ZNF546-209ENST00000602253 FANCAO15360 1455 aa7.58□□□□□ -1.2
ZNF546-209ENST00000602253 GALR2O43603 387 aaPredicted RBP7.58□□□□□ -1.2
ZNF546-209ENST00000602253 CEBPAP49715 358 aaPredicted RBP7.58□□□□□ -1.2
ZNF546-209ENST00000602253 CCDC61Q9Y6R9 512 aa7.58□□□□□ -1.2
ZNF546-209ENST00000602253 KIF27Q86VH2 1401 aa7.58□□□□□ -1.2
ZNF546-209ENST00000602253 HSPA1LP34931 641 aa7.57□□□□□ -1.2
ZNF546-209ENST00000602253 UHRF1BP1Q6BDS2 1440 aa7.57□□□□□ -1.2
ZNF546-209ENST00000602253 AKNAQ7Z591 1439 aa7.57□□□□□ -1.2
ZNF546-209ENST00000602253 TTC37Q6PGP7 1564 aa7.57□□□□□ -1.2
ZNF546-209ENST00000602253 FER1L4A9Z1Z3 1794 aa7.56□□□□□ -1.2
ZNF546-209ENST00000602253 FAM9AQ8IZU1 332 aaPredicted RBP7.56□□□□□ -1.2
ZNF546-209ENST00000602253 UGGT2Q9NYU1 1516 aa7.56□□□□□ -1.2
ZNF546-209ENST00000602253 POTEIP0CG38 1075 aa7.55□□□□□ -1.2
ZNF546-209ENST00000602253 KLHL34Q8N239 644 aa7.55□□□□□ -1.2
ZNF546-209ENST00000602253 ARHGEF40Q8TER5 1519 aa7.55□□□□□ -1.2
ZNF546-209ENST00000602253 ABCA9Q8IUA7 1624 aa7.55□□□□□ -1.2
ZNF546-209ENST00000602253 FRMPD1Q5SYB0 1578 aa7.54□□□□□ -1.2
ZNF546-209ENST00000602253 TOM1O60784 492 aa7.54□□□□□ -1.2
ZNF546-209ENST00000602253 CLCN6P51797 869 aa7.54□□□□□ -1.2
ZNF546-209ENST00000602253 LHX8Q68G74 356 aa7.54□□□□□ -1.2
ZNF546-209ENST00000602253 IFNLR1Q8IU57 520 aaPredicted RBP7.54□□□□□ -1.2
ZNF546-209ENST00000602253 DENND4BO75064 1496 aaPredicted RBP7.54□□□□□ -1.2
ZNF546-209ENST00000602253 KIAA0556O60303 1618 aa7.53□□□□□ -1.2
ZNF546-209ENST00000602253 MS4A3Q96HJ5 214 aa7.53□□□□□ -1.2
ZNF546-209ENST00000602253 FHOD3Q2V2M9 1422 aa7.52□□□□□ -1.2
ZNF546-209ENST00000602253 ABCA8O94911 1581 aa7.52□□□□□ -1.21
ZNF546-209ENST00000602253 KIF12Q96FN5 646 aa7.52□□□□□ -1.21
ZNF546-209ENST00000602253 ZNF335Q9H4Z2 1342 aaPredicted RBP7.52□□□□□ -1.21
ZNF546-209ENST00000602253 MAGI2Q86UL8 1455 aa7.51□□□□□ -1.21
ZNF546-209ENST00000602253 PIP4K2BP78356 416 aa7.51□□□□□ -1.21
ZNF546-209ENST00000602253 FAM212AQ96EL1 285 aa7.51□□□□□ -1.21
ZNF546-209ENST00000602253 RICTORQ6R327 1708 aa7.51□□□□□ -1.21
ZNF546-209ENST00000602253 ATP10BO94823 1461 aa7.5□□□□□ -1.21
ZNF546-209ENST00000602253 DCBLD2Q96PD2 775 aa7.5□□□□□ -1.21
ZNF546-209ENST00000602253 EFCAB5A4FU69 1503 aa7.5□□□□□ -1.21
ZNF546-209ENST00000602253 ARHGEF12Q9NZN5 1544 aa7.5□□□□□ -1.21
ZNF546-209ENST00000602253 SIGLEC1Q9BZZ2 1709 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms