RNA–Protein interactions for RNA: ENST00000602149.1

ZNF549-204, Transcript of zinc finger protein 549, humanhuman

TSL 1 (best) BASIC

Gene ZNF549, Length 5,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549-204ENST00000602149 TIMELESSQ9UNS1 1208 aa9.59□□□□□ -0.87
ZNF549-204ENST00000602149 KNSTRNQ9Y448 316 aa9.58□□□□□ -0.88
ZNF549-204ENST00000602149 DHX57Q6P158 1386 aaKnown RBP9.57□□□□□ -0.88
ZNF549-204ENST00000602149 PLEKHG5O94827 1062 aa9.57□□□□□ -0.88
ZNF549-204ENST00000602149 PTPRGP23470 1445 aa9.57□□□□□ -0.88
ZNF549-204ENST00000602149 HNRNPUQ00839 825 aaKnown RBP eCLIP9.57□□□□□ -0.88
ZNF549-204ENST00000602149 GRIN2BQ13224 1484 aa9.56□□□□□ -0.88
ZNF549-204ENST00000602149 SENP3Q9H4L4 574 aaPredicted RBP9.56□□□□□ -0.88
ZNF549-204ENST00000602149 SNAPC4Q5SXM2 1469 aa9.56□□□□□ -0.88
ZNF549-204ENST00000602149 LRRC9Q6ZRR7 1453 aa9.56□□□□□ -0.88
ZNF549-204ENST00000602149 FKBP8Q14318 412 aa9.55□□□□□ -0.88
ZNF549-204ENST00000602149 SETD5Q9C0A6 1442 aa9.55□□□□□ -0.88
ZNF549-204ENST00000602149 EIF3AQ14152 1382 aaKnown RBP9.55□□□□□ -0.88
ZNF549-204ENST00000602149 TMX4Q9H1E5 349 aaPredicted RBP9.54□□□□□ -0.88
ZNF549-204ENST00000602149 SPAG9O60271 1321 aaKnown RBP9.54□□□□□ -0.88
ZNF549-204ENST00000602149 MAPK8IP3Q9UPT6 1336 aa9.54□□□□□ -0.88
ZNF549-204ENST00000602149 MS4A1P11836 297 aa9.54□□□□□ -0.88
ZNF549-204ENST00000602149 MLECQ14165 292 aa9.54□□□□□ -0.88
ZNF549-204ENST00000602149 UACAQ9BZF9 1416 aa9.54□□□□□ -0.88
ZNF549-204ENST00000602149 KIF21AQ7Z4S6 1674 aa9.53□□□□□ -0.88
ZNF549-204ENST00000602149 HNRNPMP52272 730 aaKnown RBP eCLIP9.53□□□□□ -0.88
ZNF549-204ENST00000602149 LMOD2Q6P5Q4 547 aa9.53□□□□□ -0.88
ZNF549-204ENST00000602149 HDGFL2Q7Z4V5 671 aaPredicted RBP9.53□□□□□ -0.88
ZNF549-204ENST00000602149 TMF1P82094 1093 aa9.52□□□□□ -0.88
ZNF549-204ENST00000602149 CASC1Q6TDU7 716 aa9.52□□□□□ -0.88
ZNF549-204ENST00000602149 CARD11Q9BXL7 1154 aa9.52□□□□□ -0.89
ZNF549-204ENST00000602149 GGT6Q6P531 493 aa9.51□□□□□ -0.89
ZNF549-204ENST00000602149 RGL3Q3MIN7 710 aa9.51□□□□□ -0.89
ZNF549-204ENST00000602149 SENP3-EIF4A1A0A087X0R7 540 aa9.51□□□□□ -0.89
ZNF549-204ENST00000602149 IFT140Q96RY7 1462 aa9.51□□□□□ -0.89
ZNF549-204ENST00000602149 CASKIN1Q8WXD9 1431 aa9.5□□□□□ -0.89
ZNF549-204ENST00000602149 NCLP19338 710 aaKnown RBP9.49□□□□□ -0.89
ZNF549-204ENST00000602149 HMGB2P26583 209 aaKnown RBP9.49□□□□□ -0.89
ZNF549-204ENST00000602149 CDK13Q14004 1512 aaKnown RBP9.49□□□□□ -0.89
ZNF549-204ENST00000602149 ARXQ96QS3 562 aa9.49□□□□□ -0.89
ZNF549-204ENST00000602149 PCF11O94913 1555 aaKnown RBP9.49□□□□□ -0.89
ZNF549-204ENST00000602149 GOLGA2Q08379 1002 aa9.48□□□□□ -0.89
ZNF549-204ENST00000602149 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.48□□□□□ -0.89
ZNF549-204ENST00000602149 CCDC136Q96JN2 1154 aa9.48□□□□□ -0.89
ZNF549-204ENST00000602149 CALD1Q05682 793 aaKnown RBP9.48□□□□□ -0.89
ZNF549-204ENST00000602149 FGD6Q6ZV73 1430 aa9.48□□□□□ -0.89
ZNF549-204ENST00000602149 STAC3Q96MF2 364 aa9.47□□□□□ -0.89
ZNF549-204ENST00000602149 ANP32EQ9BTT0 268 aa9.47□□□□□ -0.89
ZNF549-204ENST00000602149 HDAC5Q9UQL6 1122 aa9.47□□□□□ -0.89
ZNF549-204ENST00000602149 TIAM1Q13009 1591 aa9.47□□□□□ -0.89
ZNF549-204ENST00000602149 RRBP1Q9P2E9 1410 aaKnown RBP9.47□□□□□ -0.89
ZNF549-204ENST00000602149 WASHC2CQ9Y4E1 1318 aa9.47□□□□□ -0.89
ZNF549-204ENST00000602149 PRG4Q92954 1404 aaPredicted RBP9.47□□□□□ -0.89
ZNF549-204ENST00000602149 NCOA2Q15596 1464 aa9.47□□□□□ -0.89
ZNF549-204ENST00000602149 ZRSR1Q15695 479 aaKnown RBP9.47□□□□□ -0.89
ZNF549-204ENST00000602149 CYB5RLQ6IPT4 315 aa9.47□□□□□ -0.89
ZNF549-204ENST00000602149 CFAP44Q96MT7 982 aa9.46□□□□□ -0.89
ZNF549-204ENST00000602149 MPHOSPH9Q99550 1183 aa9.46□□□□□ -0.89
ZNF549-204ENST00000602149 PLB1Q6P1J6 1458 aa9.46□□□□□ -0.9
ZNF549-204ENST00000602149 PRDM2Q13029 1718 aa9.46□□□□□ -0.9
ZNF549-204ENST00000602149 MRS2Q9HD23 443 aa9.45□□□□□ -0.9
ZNF549-204ENST00000602149 SRPK2P78362 688 aaKnown RBP9.45□□□□□ -0.9
ZNF549-204ENST00000602149 KIF3BO15066 747 aa9.44□□□□□ -0.9
ZNF549-204ENST00000602149 PKD2Q13563 968 aa9.44□□□□□ -0.9
ZNF549-204ENST00000602149 POGZQ7Z3K3 1410 aa9.44□□□□□ -0.9
ZNF549-204ENST00000602149 FYCO1Q9BQS8 1478 aa9.44□□□□□ -0.9
ZNF549-204ENST00000602149 DCAF8L1A6NGE4 600 aa9.43□□□□□ -0.9
ZNF549-204ENST00000602149 MYOM3Q5VTT5 1437 aa9.43□□□□□ -0.9
ZNF549-204ENST00000602149 TERF2IPQ9NYB0 399 aa9.43□□□□□ -0.9
ZNF549-204ENST00000602149 GRIN2AQ12879 1464 aa9.43□□□□□ -0.9
ZNF549-204ENST00000602149 GOLGA6L22H0YM25 854 aa9.42□□□□□ -0.9
ZNF549-204ENST00000602149 L3MBTL2Q969R5 705 aa9.42□□□□□ -0.9
ZNF549-204ENST00000602149 ANO8Q9HCE9 1232 aaPredicted RBP9.42□□□□□ -0.9
ZNF549-204ENST00000602149 KIAA0586Q9BVV6 1533 aa9.41□□□□□ -0.9
ZNF549-204ENST00000602149 FAM69CQ0P6D2 419 aa9.41□□□□□ -0.9
ZNF549-204ENST00000602149 RTF1Q92541 710 aaKnown RBP9.41□□□□□ -0.9
ZNF549-204ENST00000602149 CSB-PGBD3P0DP91 1061 aa9.41□□□□□ -0.9
ZNF549-204ENST00000602149 BECN1Q14457 450 aa9.41□□□□□ -0.9
ZNF549-204ENST00000602149 IQGAP2Q13576 1575 aa9.41□□□□□ -0.9
ZNF549-204ENST00000602149 VGFO15240 615 aaPredicted RBP9.41□□□□□ -0.9
ZNF549-204ENST00000602149 NUP155O75694 1391 aa9.4□□□□□ -0.9
ZNF549-204ENST00000602149 CUL7Q14999 1698 aa9.4□□□□□ -0.9
ZNF549-204ENST00000602149 PLEKHH2Q8IVE3 1493 aa9.4□□□□□ -0.91
ZNF549-204ENST00000602149 PTPRKQ15262 1439 aa9.4□□□□□ -0.91
ZNF549-204ENST00000602149 EFCAB5A4FU69 1503 aa9.4□□□□□ -0.91
ZNF549-204ENST00000602149 EPRSP07814 1512 aaKnown RBP9.4□□□□□ -0.91
ZNF549-204ENST00000602149 NBR1Q14596 966 aa9.39□□□□□ -0.91
ZNF549-204ENST00000602149 PPM1GO15355 546 aaPredicted RBP9.39□□□□□ -0.91
ZNF549-204ENST00000602149 DCAF11Q8TEB1 546 aa9.38□□□□□ -0.91
ZNF549-204ENST00000602149 FTSJ3Q8IY81 847 aaKnown RBP9.37□□□□□ -0.91
ZNF549-204ENST00000602149 SYNJ2O15056 1496 aa9.37□□□□□ -0.91
ZNF549-204ENST00000602149 WASHC2AQ641Q2 1341 aa9.37□□□□□ -0.91
ZNF549-204ENST00000602149 IRX6P78412 446 aaPredicted RBP9.37□□□□□ -0.91
ZNF549-204ENST00000602149 AFAP1Q8N556 730 aa9.37□□□□□ -0.91
ZNF549-204ENST00000602149 TARBP1Q13395 1621 aaKnown RBP9.36□□□□□ -0.91
ZNF549-204ENST00000602149 OS9Q13438 667 aaPredicted RBP9.36□□□□□ -0.91
ZNF549-204ENST00000602149 MORC1Q86VD1 984 aa9.36□□□□□ -0.91
ZNF549-204ENST00000602149 CCDC9Q9Y3X0 531 aaKnown RBP9.36□□□□□ -0.91
ZNF549-204ENST00000602149 LMOD3Q0VAK6 560 aa9.36□□□□□ -0.91
ZNF549-204ENST00000602149 TULP1O00294 542 aaPredicted RBP9.36□□□□□ -0.91
ZNF549-204ENST00000602149 DDRGK1Q96HY6 314 aa9.36□□□□□ -0.91
ZNF549-204ENST00000602149 ABCA5Q8WWZ7 1642 aa9.36□□□□□ -0.91
ZNF549-204ENST00000602149 HSPA5P11021 654 aaKnown RBP9.36□□□□□ -0.91
ZNF549-204ENST00000602149 NGDNQ8NEJ9 315 aaKnown RBP9.35□□□□□ -0.91
ZNF549-204ENST00000602149 THOC2Q8NI27 1593 aaKnown RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms