RNA–Protein interactions for RNA: ENST00000601978.1

SUPT5H-220, Transcript of SPT5 homolog, DSIF elongation factor subunit, humanhuman

TSL 2

Gene SUPT5H, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT5H-220ENST00000601978 EFCAB2Q5VUJ9 269 aa22.26■■□□□ 1.15
SUPT5H-220ENST00000601978 CDK11AQ9UQ88 783 aaPredicted RBP22.25■■□□□ 1.15
SUPT5H-220ENST00000601978 ATP10AO60312 1499 aa22.25■■□□□ 1.15
SUPT5H-220ENST00000601978 MLECQ14165 292 aa22.23■■□□□ 1.15
SUPT5H-220ENST00000601978 UBTFP17480 764 aaKnown RBP22.22■■□□□ 1.15
SUPT5H-220ENST00000601978 ARHGEF12Q9NZN5 1544 aa22.21■■□□□ 1.15
SUPT5H-220ENST00000601978 PLPPR3Q6T4P5 718 aa22.21■■□□□ 1.15
SUPT5H-220ENST00000601978 C9orf84Q5VXU9 1444 aa22.21■■□□□ 1.15
SUPT5H-220ENST00000601978 ARHGAP35Q9NRY4 1499 aa22.2■■□□□ 1.14
SUPT5H-220ENST00000601978 FER1L4A9Z1Z3 1794 aa22.2■■□□□ 1.14
SUPT5H-220ENST00000601978 ATP1B4Q9UN42 357 aaPredicted RBP22.19■■□□□ 1.14
SUPT5H-220ENST00000601978 MYO5CQ9NQX4 1742 aa22.18■■□□□ 1.14
SUPT5H-220ENST00000601978 TROQ12816 1431 aaPredicted RBP22.17■■□□□ 1.14
SUPT5H-220ENST00000601978 ZNF518AQ6AHZ1 1483 aa22.16■■□□□ 1.14
SUPT5H-220ENST00000601978 CERKQ8TCT0 537 aa22.15■■□□□ 1.14
SUPT5H-220ENST00000601978 KIF14Q15058 1648 aa22.13■■□□□ 1.13
SUPT5H-220ENST00000601978 AFAP1Q8N556 730 aa22.13■■□□□ 1.13
SUPT5H-220ENST00000601978 KDM5CP41229 1560 aa22.12■■□□□ 1.13
SUPT5H-220ENST00000601978 CLIP1P30622 1438 aa22.12■■□□□ 1.13
SUPT5H-220ENST00000601978 EHMT2Q96KQ7 1210 aa22.1■■□□□ 1.13
SUPT5H-220ENST00000601978 ARHGAP5Q13017 1502 aa22.1■■□□□ 1.13
SUPT5H-220ENST00000601978 CEBPAP49715 358 aaPredicted RBP22.09■■□□□ 1.13
SUPT5H-220ENST00000601978 PREX1Q8TCU6 1659 aa22.09■■□□□ 1.13
SUPT5H-220ENST00000601978 SETD1BQ9UPS6 1966 aaKnown RBP22.08■■□□□ 1.13
SUPT5H-220ENST00000601978 REREQ9P2R6 1566 aa22.07■■□□□ 1.12
SUPT5H-220ENST00000601978 DMRT2Q9Y5R5 561 aa22.06■■□□□ 1.12
SUPT5H-220ENST00000601978 MLH3Q9UHC1 1453 aa22.06■■□□□ 1.12
SUPT5H-220ENST00000601978 DIP2CQ9Y2E4 1556 aa22.04■■□□□ 1.12
SUPT5H-220ENST00000601978 CHIC1Q5VXU3 224 aa22.03■■□□□ 1.12
SUPT5H-220ENST00000601978 LRRIQ1Q96JM4 1722 aa22.03■■□□□ 1.12
SUPT5H-220ENST00000601978 MYT1LQ9UL68 1186 aa22.02■■□□□ 1.12
SUPT5H-220ENST00000601978 UHRF1BP1Q6BDS2 1440 aa22.02■■□□□ 1.12
SUPT5H-220ENST00000601978 CDC42BPBQ9Y5S2 1711 aa22.02■■□□□ 1.12
SUPT5H-220ENST00000601978 AGLP35573 1532 aa22.01■■□□□ 1.11
SUPT5H-220ENST00000601978 STRCQ7RTU9 1775 aa21.99■■□□□ 1.11
SUPT5H-220ENST00000601978 CASKIN1Q8WXD9 1431 aa21.99■■□□□ 1.11
SUPT5H-220ENST00000601978 TRAPPC8Q9Y2L5 1435 aa21.99■■□□□ 1.11
SUPT5H-220ENST00000601978 CCDC18Q5T9S5 1454 aa21.99■■□□□ 1.11
SUPT5H-220ENST00000601978 ABCC1P33527 1531 aa21.98■■□□□ 1.11
SUPT5H-220ENST00000601978 PREX2Q70Z35 1606 aa21.98■■□□□ 1.11
SUPT5H-220ENST00000601978 ABCA6Q8N139 1617 aa21.98■■□□□ 1.11
SUPT5H-220ENST00000601978 ESF1Q9H501 851 aaKnown RBP21.94■■□□□ 1.1
SUPT5H-220ENST00000601978 PTPRTO14522 1441 aa21.94■■□□□ 1.1
SUPT5H-220ENST00000601978 C3P01024 1663 aa21.93■■□□□ 1.1
SUPT5H-220ENST00000601978 ITSN2Q9NZM3 1697 aa21.92■■□□□ 1.1
SUPT5H-220ENST00000601978 CNTLNQ9NXG0 1405 aa21.92■■□□□ 1.1
SUPT5H-220ENST00000601978 KIDINS220Q9ULH0 1771 aa21.91■■□□□ 1.1
SUPT5H-220ENST00000601978 CDC42BPAQ5VT25 1732 aa21.89■■□□□ 1.09
SUPT5H-220ENST00000601978 FYCO1Q9BQS8 1478 aa21.87■■□□□ 1.09
SUPT5H-220ENST00000601978 SAMD9LQ8IVG5 1584 aa21.86■■□□□ 1.09
SUPT5H-220ENST00000601978 NPATQ14207 1427 aa21.84■■□□□ 1.09
SUPT5H-220ENST00000601978 GPATCH8Q9UKJ3 1502 aaKnown RBP21.84■■□□□ 1.09
SUPT5H-220ENST00000601978 NCOA1Q15788 1441 aa21.83■■□□□ 1.09
SUPT5H-220ENST00000601978 SPAG9O60271 1321 aaKnown RBP21.82■■□□□ 1.08
SUPT5H-220ENST00000601978 KIAA1107Q9UPP5 1409 aa21.81■■□□□ 1.08
SUPT5H-220ENST00000601978 ZNF777Q9ULD5 760 aaPredicted RBP21.81■■□□□ 1.08
SUPT5H-220ENST00000601978 ZMYM3Q14202 1370 aa21.81■■□□□ 1.08
SUPT5H-220ENST00000601978 MROH2AA6NES4 1674 aa21.8■■□□□ 1.08
SUPT5H-220ENST00000601978 HNRNPMP52272 730 aaKnown RBP eCLIP21.8■■□□□ 1.08
SUPT5H-220ENST00000601978 LTBP4Q8N2S1 1624 aa21.8■■□□□ 1.08
SUPT5H-220ENST00000601978 IQSEC2Q5JU85 1478 aa21.79■■□□□ 1.08
SUPT5H-220ENST00000601978 SYCP2Q9BX26 1530 aa21.79■■□□□ 1.08
SUPT5H-220ENST00000601978 PLEKHH2Q8IVE3 1493 aa21.78■■□□□ 1.08
SUPT5H-220ENST00000601978 DISP3Q9P2K9 1392 aa21.76■■□□□ 1.07
SUPT5H-220ENST00000601978 CFDP1Q9UEE9 299 aaPredicted RBP21.76■■□□□ 1.07
SUPT5H-220ENST00000601978 ATP7AQ04656 1500 aa21.75■■□□□ 1.07
SUPT5H-220ENST00000601978 PLXNC1O60486 1568 aa21.74■■□□□ 1.07
SUPT5H-220ENST00000601978 CAMSAP1Q5T5Y3 1602 aa21.73■■□□□ 1.07
SUPT5H-220ENST00000601978 A2MP01023 1474 aa21.73■■□□□ 1.07
SUPT5H-220ENST00000601978 PPP6R1Q9UPN7 881 aa21.73■■□□□ 1.07
SUPT5H-220ENST00000601978 CCNB3Q8WWL7 1395 aa21.73■■□□□ 1.07
SUPT5H-220ENST00000601978 INO80Q9ULG1 1556 aaPredicted RBP21.72■■□□□ 1.07
SUPT5H-220ENST00000601978 SUPT6HQ7KZ85 1726 aaKnown RBP21.72■■□□□ 1.07
SUPT5H-220ENST00000601978 ILDR2Q71H61 639 aa21.71■■□□□ 1.07
SUPT5H-220ENST00000601978 PKD2Q13563 968 aa21.7■■□□□ 1.06
SUPT5H-220ENST00000601978 PTPRKQ15262 1439 aa21.69■■□□□ 1.06
SUPT5H-220ENST00000601978 PLA2R1Q13018 1463 aa21.69■■□□□ 1.06
SUPT5H-220ENST00000601978 NCKAP5LQ9HCH0 1330 aa21.68■■□□□ 1.06
SUPT5H-220ENST00000601978 MTUS2Q5JR59 1369 aa21.68■■□□□ 1.06
SUPT5H-220ENST00000601978 SOCS7O14512 581 aa21.67■■□□□ 1.06
SUPT5H-220ENST00000601978 GGT6Q6P531 493 aa21.67■■□□□ 1.06
SUPT5H-220ENST00000601978 CLTCQ00610 1675 aaKnown RBP21.66■■□□□ 1.06
SUPT5H-220ENST00000601978 ZNF142P52746 1687 aaPredicted RBP21.66■■□□□ 1.06
SUPT5H-220ENST00000601978 TCOF1Q13428 1488 aaKnown RBP21.64■■□□□ 1.06
SUPT5H-220ENST00000601978 MBD5Q9P267 1494 aa21.64■■□□□ 1.05
SUPT5H-220ENST00000601978 ZNF335Q9H4Z2 1342 aaPredicted RBP21.63■■□□□ 1.05
SUPT5H-220ENST00000601978 RTEL1-TNFRSF6BF6WH68 1400 aa21.63■■□□□ 1.05
SUPT5H-220ENST00000601978 MYO3AQ8NEV4 1616 aa21.62■■□□□ 1.05
SUPT5H-220ENST00000601978 CEP170BQ9Y4F5 1589 aaPredicted RBP21.62■■□□□ 1.05
SUPT5H-220ENST00000601978 ZNF644Q9H582 1327 aaPredicted RBP21.62■■□□□ 1.05
SUPT5H-220ENST00000601978 ADGBQ8N7X0 1667 aa21.62■■□□□ 1.05
SUPT5H-220ENST00000601978 SPATA31D1Q6ZQQ2 1576 aa21.6■■□□□ 1.05
SUPT5H-220ENST00000601978 TIAM1Q13009 1591 aa21.59■■□□□ 1.05
SUPT5H-220ENST00000601978 DHX29Q7Z478 1369 aaKnown RBP21.59■■□□□ 1.05
SUPT5H-220ENST00000601978 CEP162Q5TB80 1403 aa21.58■■□□□ 1.05
SUPT5H-220ENST00000601978 EHBP1L1Q8N3D4 1523 aa21.57■■□□□ 1.04
SUPT5H-220ENST00000601978 A2ML1A8K2U0 1454 aa21.57■■□□□ 1.04
SUPT5H-220ENST00000601978 UBAP1LF5GYI3 381 aa21.56■■□□□ 1.04
SUPT5H-220ENST00000601978 RSPH4AQ5TD94 716 aa21.54■■□□□ 1.04
SUPT5H-220ENST00000601978 DNMT1P26358 1616 aaKnown RBP21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms