RNA–Protein interactions for RNA: ENST00000599846.5

ARHGEF1-219, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ARHGEF1, Length 3,393 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-219ENST00000599846 SAMD9Q5K651 1589 aa21.59■■□□□ 1.05
ARHGEF1-219ENST00000599846 PPP4R2Q9NY27 417 aa21.58■■□□□ 1.05
ARHGEF1-219ENST00000599846 CNTLNQ9NXG0 1405 aa21.58■■□□□ 1.05
ARHGEF1-219ENST00000599846 SALL2Q9Y467 1007 aaPredicted RBP21.57■■□□□ 1.04
ARHGEF1-219ENST00000599846 ABCA5Q8WWZ7 1642 aa21.56■■□□□ 1.04
ARHGEF1-219ENST00000599846 TMC1Q8TDI8 760 aa21.54■■□□□ 1.04
ARHGEF1-219ENST00000599846 THOC2Q8NI27 1593 aaKnown RBP21.54■■□□□ 1.04
ARHGEF1-219ENST00000599846 KDM6BO15054 1643 aa21.53■■□□□ 1.04
ARHGEF1-219ENST00000599846 MIA2Q96PC5 1412 aa21.53■■□□□ 1.04
ARHGEF1-219ENST00000599846 HECW1Q76N89 1606 aa21.53■■□□□ 1.04
ARHGEF1-219ENST00000599846 IQGAP2Q13576 1575 aa21.53■■□□□ 1.04
ARHGEF1-219ENST00000599846 LRRIQ1Q96JM4 1722 aa21.53■■□□□ 1.04
ARHGEF1-219ENST00000599846 ANKRD30BQ9BXX2 1392 aa21.51■■□□□ 1.03
ARHGEF1-219ENST00000599846 DAPK1P53355 1430 aa21.51■■□□□ 1.03
ARHGEF1-219ENST00000599846 CARD11Q9BXL7 1154 aa21.5■■□□□ 1.03
ARHGEF1-219ENST00000599846 TSPY4P0CV99 314 aa21.49■■□□□ 1.03
ARHGEF1-219ENST00000599846 TSPY10P0CW01 314 aa21.49■■□□□ 1.03
ARHGEF1-219ENST00000599846 PLEKHD1A6NEE1 506 aa21.48■■□□□ 1.03
ARHGEF1-219ENST00000599846 ABCC5O15440 1437 aa21.48■■□□□ 1.03
ARHGEF1-219ENST00000599846 PRG4Q92954 1404 aaPredicted RBP21.48■■□□□ 1.03
ARHGEF1-219ENST00000599846 DENND4BO75064 1496 aaPredicted RBP21.47■■□□□ 1.03
ARHGEF1-219ENST00000599846 ZNF608Q9ULD9 1512 aaPredicted RBP21.47■■□□□ 1.03
ARHGEF1-219ENST00000599846 TCOF1Q13428 1488 aaKnown RBP21.46■■□□□ 1.03
ARHGEF1-219ENST00000599846 ZBED9Q6R2W3 1325 aa21.46■■□□□ 1.03
ARHGEF1-219ENST00000599846 MSH5O43196 834 aa21.45■■□□□ 1.02
ARHGEF1-219ENST00000599846 KDM5BQ9UGL1 1544 aa21.45■■□□□ 1.02
ARHGEF1-219ENST00000599846 KIF21AQ7Z4S6 1674 aa21.45■■□□□ 1.02
ARHGEF1-219ENST00000599846 RGL3Q3MIN7 710 aa21.45■■□□□ 1.02
ARHGEF1-219ENST00000599846 CCDC136Q96JN2 1154 aa21.45■■□□□ 1.02
ARHGEF1-219ENST00000599846 NCOA1Q15788 1441 aa21.44■■□□□ 1.02
ARHGEF1-219ENST00000599846 DCAF11Q8TEB1 546 aa21.44■■□□□ 1.02
ARHGEF1-219ENST00000599846 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.44■■□□□ 1.021e-6■■□□□ 14.4
ARHGEF1-219ENST00000599846 NUP155O75694 1391 aa21.43■■□□□ 1.02
ARHGEF1-219ENST00000599846 USP47Q96K76 1375 aa21.42■■□□□ 1.02
ARHGEF1-219ENST00000599846 RPRD2Q5VT52 1461 aaKnown RBP21.41■■□□□ 1.02
ARHGEF1-219ENST00000599846 JPH4Q96JJ6 628 aa21.4■■□□□ 1.02
ARHGEF1-219ENST00000599846 ARHGEF11O15085 1522 aa21.4■■□□□ 1.02
ARHGEF1-219ENST00000599846 HNRNPMP52272 730 aaKnown RBP eCLIP21.39■■□□□ 1.02
ARHGEF1-219ENST00000599846 AKNAQ7Z591 1439 aa21.39■■□□□ 1.01
ARHGEF1-219ENST00000599846 ROCK1Q13464 1354 aa21.38■■□□□ 1.01
ARHGEF1-219ENST00000599846 ST20-MTHFSA0A0A6YYL1 179 aa21.37■■□□□ 1.01
ARHGEF1-219ENST00000599846 ANKRD30AQ9BXX3 1397 aa21.37■■□□□ 1.01
ARHGEF1-219ENST00000599846 TARBP1Q13395 1621 aaKnown RBP21.37■■□□□ 1.01
ARHGEF1-219ENST00000599846 ERICH6BQ5W0A0 696 aa21.37■■□□□ 1.01
ARHGEF1-219ENST00000599846 WDR62O43379 1518 aa21.36■■□□□ 1.01
ARHGEF1-219ENST00000599846 MRC2Q9UBG0 1479 aa21.36■■□□□ 1.01
ARHGEF1-219ENST00000599846 NUP153P49790 1475 aaKnown RBP21.34■■□□□ 1.01
ARHGEF1-219ENST00000599846 PLB1Q6P1J6 1458 aa21.34■■□□□ 1.01
ARHGEF1-219ENST00000599846 KIAA0586Q9BVV6 1533 aa21.33■■□□□ 1.01
ARHGEF1-219ENST00000599846 ERCC6Q03468 1493 aa21.32■■□□□ 1
ARHGEF1-219ENST00000599846 NUDCQ9Y266 331 aa21.32■■□□□ 1
ARHGEF1-219ENST00000599846 GCC2Q8IWJ2 1684 aa21.32■■□□□ 1
ARHGEF1-219ENST00000599846 ADAMTS12P58397 1594 aa21.31■■□□□ 1
ARHGEF1-219ENST00000599846 NBR1Q14596 966 aa21.3■■□□□ 1
ARHGEF1-219ENST00000599846 TROQ12816 1431 aaPredicted RBP21.3■■□□□ 1
ARHGEF1-219ENST00000599846 ANKRD50Q9ULJ7 1429 aa21.3■■□□□ 1
ARHGEF1-219ENST00000599846 FANCIQ9NVI1 1328 aa21.3■■□□□ 1
ARHGEF1-219ENST00000599846 PBRM1Q86U86 1689 aa21.28■■□□□ 1
ARHGEF1-219ENST00000599846 KIAA1107Q9UPP5 1409 aa21.28■■□□□ 1
ARHGEF1-219ENST00000599846 TEX14Q8IWB6 1497 aa21.28■■□□□ 1
ARHGEF1-219ENST00000599846 CAMSAP2Q08AD1 1489 aa21.28■■□□□ 1
ARHGEF1-219ENST00000599846 DISP1Q96F81 1524 aa21.27■□□□□ 0.99
ARHGEF1-219ENST00000599846 NPM2Q86SE8 214 aaKnown RBP21.26■□□□□ 0.99
ARHGEF1-219ENST00000599846 CARMIL2Q6F5E8 1435 aa21.26■□□□□ 0.99
ARHGEF1-219ENST00000599846 IFT140Q96RY7 1462 aa21.26■□□□□ 0.99
ARHGEF1-219ENST00000599846 BCL11AQ9H165 835 aa21.25■□□□□ 0.99
ARHGEF1-219ENST00000599846 CC2D1BQ5T0F9 858 aaKnown RBP21.24■□□□□ 0.99
ARHGEF1-219ENST00000599846 GRIN2AQ12879 1464 aa21.23■□□□□ 0.99
ARHGEF1-219ENST00000599846 SPATA31E1Q6ZUB1 1445 aa21.23■□□□□ 0.99
ARHGEF1-219ENST00000599846 ROCK2O75116 1388 aaKnown RBP21.22■□□□□ 0.99
ARHGEF1-219ENST00000599846 PNISRQ8TF01 805 aaKnown RBP21.22■□□□□ 0.99
ARHGEF1-219ENST00000599846 PZPP20742 1482 aa21.22■□□□□ 0.99
ARHGEF1-219ENST00000599846 GPATCH8Q9UKJ3 1502 aaKnown RBP21.22■□□□□ 0.99
ARHGEF1-219ENST00000599846 ANP32AP39687 249 aaKnown RBP21.21■□□□□ 0.99
ARHGEF1-219ENST00000599846 KIAA0556O60303 1618 aa21.2■□□□□ 0.98
ARHGEF1-219ENST00000599846 DNMT1P26358 1616 aaKnown RBP21.2■□□□□ 0.98
ARHGEF1-219ENST00000599846 RAPGEF6Q8TEU7 1601 aa21.19■□□□□ 0.98
ARHGEF1-219ENST00000599846 DHX29Q7Z478 1369 aaKnown RBP21.18■□□□□ 0.98
ARHGEF1-219ENST00000599846 KIF15Q9NS87 1388 aa21.17■□□□□ 0.98
ARHGEF1-219ENST00000599846 MYT1LQ9UL68 1186 aa21.17■□□□□ 0.98
ARHGEF1-219ENST00000599846 NBPF1Q3BBV0 1214 aa21.16■□□□□ 0.98
ARHGEF1-219ENST00000599846 C9orf84Q5VXU9 1444 aa21.15■□□□□ 0.98
ARHGEF1-219ENST00000599846 NOP58Q9Y2X3 529 aaKnown RBP21.15■□□□□ 0.98
ARHGEF1-219ENST00000599846 MYBBP1AQ9BQG0 1328 aaKnown RBP21.14■□□□□ 0.97
ARHGEF1-219ENST00000599846 SMG6Q86US8 1419 aaKnown RBP21.13■□□□□ 0.97
ARHGEF1-219ENST00000599846 RALBP1Q15311 655 aa21.12■□□□□ 0.97
ARHGEF1-219ENST00000599846 EXOC6Q8TAG9 804 aa21.11■□□□□ 0.97
ARHGEF1-219ENST00000599846 RCAN3Q9UKA8 241 aa21.11■□□□□ 0.97
ARHGEF1-219ENST00000599846 ZBTB47Q9UFB7 747 aaPredicted RBP21.1■□□□□ 0.97
ARHGEF1-219ENST00000599846 KIF14Q15058 1648 aa21.1■□□□□ 0.97
ARHGEF1-219ENST00000599846 PAK3O75914 559 aaPredicted RBP21.09■□□□□ 0.97
ARHGEF1-219ENST00000599846 ARID4BQ4LE39 1312 aaPredicted RBP21.09■□□□□ 0.97
ARHGEF1-219ENST00000599846 NLRP13Q86W25 1043 aa21.08■□□□□ 0.97
ARHGEF1-219ENST00000599846 KTN1Q86UP2 1357 aaKnown RBP21.07■□□□□ 0.96
ARHGEF1-219ENST00000599846 PLIN1O60240 522 aa21.07■□□□□ 0.96
ARHGEF1-219ENST00000599846 CDCA7LQ96GN5 454 aa21.07■□□□□ 0.96
ARHGEF1-219ENST00000599846 RTL5Q5HYW3 569 aaPredicted RBP21.06■□□□□ 0.96
ARHGEF1-219ENST00000599846 CCDC144AA2RUR9 1427 aa21.05■□□□□ 0.96
ARHGEF1-219ENST00000599846 PANK3Q9H999 370 aa21.05■□□□□ 0.96
ARHGEF1-219ENST00000599846 PTPRGP23470 1445 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 114.6 ms