RNA–Protein interactions for RNA: ENST00000598229.1

LINC00343-205, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 735 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-205ENST00000598229 RAPGEF2Q9Y4G8 1499 aa16.25■□□□□ 0.19
LINC00343-205ENST00000598229 FXR2P51116 673 aaKnown RBP eCLIP16.25■□□□□ 0.19
LINC00343-205ENST00000598229 ZNF692Q9BU19 519 aaPredicted RBP16.25■□□□□ 0.19
LINC00343-205ENST00000598229 KIAA0556O60303 1618 aa16.25■□□□□ 0.19
LINC00343-205ENST00000598229 PHLDB1Q86UU1 1377 aa16.25■□□□□ 0.19
LINC00343-205ENST00000598229 CFAP43Q8NDM7 1665 aa16.24■□□□□ 0.19
LINC00343-205ENST00000598229 PTPRMP28827 1452 aa16.23■□□□□ 0.19
LINC00343-205ENST00000598229 SSUH2Q9Y2M2 353 aa16.22■□□□□ 0.19
LINC00343-205ENST00000598229 SPDYE1Q8NFV5 336 aaPredicted RBP16.19■□□□□ 0.18
LINC00343-205ENST00000598229 KIF21BO75037 1637 aa16.19■□□□□ 0.18
LINC00343-205ENST00000598229 GOLGA3Q08378 1498 aa16.18■□□□□ 0.18
LINC00343-205ENST00000598229 ABCA8O94911 1581 aa16.17■□□□□ 0.18
LINC00343-205ENST00000598229 EHMT2Q96KQ7 1210 aa16.17■□□□□ 0.18
LINC00343-205ENST00000598229 ADAMTSL3P82987 1691 aa16.17■□□□□ 0.18
LINC00343-205ENST00000598229 FAM9AQ8IZU1 332 aaPredicted RBP16.14■□□□□ 0.17
LINC00343-205ENST00000598229 PCF11O94913 1555 aaKnown RBP16.13■□□□□ 0.17
LINC00343-205ENST00000598229 LMTK3Q96Q04 1460 aa16.13■□□□□ 0.17
LINC00343-205ENST00000598229 RAPGEF3O95398 923 aa16.12■□□□□ 0.17
LINC00343-205ENST00000598229 CLEC11AQ9Y240 323 aa16.1■□□□□ 0.17
LINC00343-205ENST00000598229 NEO1Q92859 1461 aa16.1■□□□□ 0.17
LINC00343-205ENST00000598229 SP7Q8TDD2 431 aaPredicted RBP16.09■□□□□ 0.17
LINC00343-205ENST00000598229 ARID4BQ4LE39 1312 aaPredicted RBP16.09■□□□□ 0.17
LINC00343-205ENST00000598229 CERKQ8TCT0 537 aa16.08■□□□□ 0.16
LINC00343-205ENST00000598229 ATP10BO94823 1461 aa16.08■□□□□ 0.16
LINC00343-205ENST00000598229 BCORL1Q5H9F3 1711 aa16.05■□□□□ 0.16
LINC00343-205ENST00000598229 ABCA9Q8IUA7 1624 aa16.05■□□□□ 0.16
LINC00343-205ENST00000598229 HAX1O00165 279 aa16.05■□□□□ 0.16
LINC00343-205ENST00000598229 MADDQ8WXG6 1647 aa16.02■□□□□ 0.16
LINC00343-205ENST00000598229 SOCS7O14512 581 aa16.02■□□□□ 0.16
LINC00343-205ENST00000598229 HSPA2P54652 639 aa16.02■□□□□ 0.16
LINC00343-205ENST00000598229 CTTNBP2Q8WZ74 1663 aa16.01■□□□□ 0.15
LINC00343-205ENST00000598229 ARID3CA6NKF2 412 aa16■□□□□ 0.15
LINC00343-205ENST00000598229 POGZQ7Z3K3 1410 aa15.98■□□□□ 0.15
LINC00343-205ENST00000598229 PRXQ9BXM0 1461 aa15.97■□□□□ 0.15
LINC00343-205ENST00000598229 FRMPD1Q5SYB0 1578 aa15.97■□□□□ 0.15
LINC00343-205ENST00000598229 PRKAR2AP13861 404 aaKnown RBP15.97■□□□□ 0.15
LINC00343-205ENST00000598229 FHOD3Q2V2M9 1422 aa15.96■□□□□ 0.15
LINC00343-205ENST00000598229 ILDR2Q71H61 639 aa15.96■□□□□ 0.15
LINC00343-205ENST00000598229 DENND4BO75064 1496 aaPredicted RBP15.96■□□□□ 0.14
LINC00343-205ENST00000598229 P3H3Q8IVL6 736 aa15.95■□□□□ 0.14
LINC00343-205ENST00000598229 DISP3Q9P2K9 1392 aa15.95■□□□□ 0.14
LINC00343-205ENST00000598229 ARHGEF40Q8TER5 1519 aa15.94■□□□□ 0.14
LINC00343-205ENST00000598229 AKNAQ7Z591 1439 aa15.94■□□□□ 0.14
LINC00343-205ENST00000598229 RIMS1Q86UR5 1692 aaKnown RBP15.92■□□□□ 0.14
LINC00343-205ENST00000598229 FANCAO15360 1455 aa15.92■□□□□ 0.14
LINC00343-205ENST00000598229 MAGI2Q86UL8 1455 aa15.91■□□□□ 0.14
LINC00343-205ENST00000598229 PLEKHD1A6NEE1 506 aa15.9■□□□□ 0.14
LINC00343-205ENST00000598229 YEATS2Q9ULM3 1422 aa15.87■□□□□ 0.13
LINC00343-205ENST00000598229 PRR29P0C7W0 189 aa15.87■□□□□ 0.13
LINC00343-205ENST00000598229 ZMYM4Q5VZL5 1548 aa15.87■□□□□ 0.13
LINC00343-205ENST00000598229 RICTORQ6R327 1708 aa15.86■□□□□ 0.13
LINC00343-205ENST00000598229 RAPGEF6Q8TEU7 1601 aa15.86■□□□□ 0.13
LINC00343-205ENST00000598229 NUP153P49790 1475 aaKnown RBP15.85■□□□□ 0.13
LINC00343-205ENST00000598229 EFCAB5A4FU69 1503 aa15.84■□□□□ 0.13
LINC00343-205ENST00000598229 ZFYVE16Q7Z3T8 1539 aa15.84■□□□□ 0.13
LINC00343-205ENST00000598229 MLECQ14165 292 aa15.83■□□□□ 0.12
LINC00343-205ENST00000598229 SAMD9Q5K651 1589 aa15.83■□□□□ 0.12
LINC00343-205ENST00000598229 TTC37Q6PGP7 1564 aa15.83■□□□□ 0.12
LINC00343-205ENST00000598229 CFAP74Q9C0B2 1584 aa15.83■□□□□ 0.12
LINC00343-205ENST00000598229 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.78■□□□□ 0.12
LINC00343-205ENST00000598229 ARHGEF12Q9NZN5 1544 aa15.78■□□□□ 0.12
LINC00343-205ENST00000598229 ATP10AO60312 1499 aa15.78■□□□□ 0.12
LINC00343-205ENST00000598229 SCAPERQ9BY12 1400 aa15.77■□□□□ 0.12
LINC00343-205ENST00000598229 SIGLEC1Q9BZZ2 1709 aa15.77■□□□□ 0.12
LINC00343-205ENST00000598229 CEBPAP49715 358 aaPredicted RBP15.77■□□□□ 0.12
LINC00343-205ENST00000598229 PTPRTO14522 1441 aa15.77■□□□□ 0.11
LINC00343-205ENST00000598229 HECW1Q76N89 1606 aa15.76■□□□□ 0.11
LINC00343-205ENST00000598229 PLCH2O75038 1416 aa15.76■□□□□ 0.11
LINC00343-205ENST00000598229 EVX2Q03828 476 aa15.75■□□□□ 0.11
LINC00343-205ENST00000598229 PREX1Q8TCU6 1659 aa15.75■□□□□ 0.11
LINC00343-205ENST00000598229 C9orf84Q5VXU9 1444 aa15.75■□□□□ 0.11
LINC00343-205ENST00000598229 FER1L4A9Z1Z3 1794 aa15.75■□□□□ 0.11
LINC00343-205ENST00000598229 CHADLQ6NUI6 762 aa15.74■□□□□ 0.11
LINC00343-205ENST00000598229 UHRF1BP1Q6BDS2 1440 aa15.74■□□□□ 0.11
LINC00343-205ENST00000598229 C19orf67A6NJJ6 358 aa15.73■□□□□ 0.11
LINC00343-205ENST00000598229 EFCAB2Q5VUJ9 269 aa15.73■□□□□ 0.11
LINC00343-205ENST00000598229 STRCQ7RTU9 1775 aa15.72■□□□□ 0.11
LINC00343-205ENST00000598229 SPATA31D1Q6ZQQ2 1576 aa15.72■□□□□ 0.11
LINC00343-205ENST00000598229 IQSEC2Q5JU85 1478 aa15.71■□□□□ 0.11
LINC00343-205ENST00000598229 SETD1BQ9UPS6 1966 aaKnown RBP15.71■□□□□ 0.1
LINC00343-205ENST00000598229 SPDYE4A6NLX3 237 aa15.67■□□□□ 0.1
LINC00343-205ENST00000598229 LTBP4Q8N2S1 1624 aa15.66■□□□□ 0.1
LINC00343-205ENST00000598229 RANGAP1P46060 587 aaPredicted RBP15.65■□□□□ 0.1
LINC00343-205ENST00000598229 STAG3Q9UJ98 1225 aa15.65■□□□□ 0.1
LINC00343-205ENST00000598229 ZNF518AQ6AHZ1 1483 aa15.65■□□□□ 0.1
LINC00343-205ENST00000598229 AFAP1Q8N556 730 aa15.64■□□□□ 0.09
LINC00343-205ENST00000598229 TRAPPC8Q9Y2L5 1435 aa15.64■□□□□ 0.09
LINC00343-205ENST00000598229 CDK11AQ9UQ88 783 aaPredicted RBP15.63■□□□□ 0.09
LINC00343-205ENST00000598229 ESF1Q9H501 851 aaKnown RBP15.62■□□□□ 0.09
LINC00343-205ENST00000598229 REREQ9P2R6 1566 aa15.61■□□□□ 0.09
LINC00343-205ENST00000598229 NCOA1Q15788 1441 aa15.6■□□□□ 0.09
LINC00343-205ENST00000598229 CDK13Q14004 1512 aaKnown RBP15.59■□□□□ 0.09
LINC00343-205ENST00000598229 KDM5CP41229 1560 aa15.59■□□□□ 0.09
LINC00343-205ENST00000598229 EEA1Q15075 1411 aa15.59■□□□□ 0.09
LINC00343-205ENST00000598229 MYT1LQ9UL68 1186 aa15.58■□□□□ 0.08
LINC00343-205ENST00000598229 MLH3Q9UHC1 1453 aa15.58■□□□□ 0.08
LINC00343-205ENST00000598229 AGLP35573 1532 aa15.58■□□□□ 0.08
LINC00343-205ENST00000598229 UBAP1LF5GYI3 381 aa15.57■□□□□ 0.08
LINC00343-205ENST00000598229 FARP1Q9Y4F1 1045 aaPredicted RBP15.57■□□□□ 0.08
LINC00343-205ENST00000598229 CNTLNQ9NXG0 1405 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms